Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0820G291 Amborella trichopoda HOM05D004666 ORTHO05D005822 5.3e-184 647.5 316 100.0
MBI17_g35786_MAGBIO Magnolia biondii HOM05D004666 ORTHO05D005822 4.1e-59 232.6 313 39.3
TAR365G1212 Trochodendron aralioides HOM05D004666 ORTHO05D005822 1.9e-56 223.8 355 34.9
Dinv21227 Davidia involucrata HOM05D004666 ORTHO05D005822 7.1e-56 221.9 353 37.7
Atru.chr8.1588 Acer truncatum HOM05D004666 ORTHO05D005822 3.5e-55 219.5 376 33.5
Gorai.001G233200 Gossypium raimondii HOM05D004666 ORTHO05D005822 4.6e-55 219.2 353 36.8
Gohir.D07G206800 Gossypium hirsutum HOM05D004666 ORTHO05D005822 1.1e-53 214.5 353 35.1
Carub.0001s1905 Capsella rubella HOM05D004666 ORTHO05D005822 2.5e-53 213.4 332 34.3
GSVIVG01032069001 Vitis vinifera HOM05D004666 ORTHO05D005822 5.7e-53 212.2 338 37.0
Gohir.A07G200500 Gossypium hirsutum HOM05D004666 ORTHO05D005822 3.7e-52 209.5 352 34.1
Rhsim05G0022800 Rhododendron simsii HOM05D004666 ORTHO05D005822 6.3e-52 208.8 373 34.3
BcaB03g12912 Brassica carinata HOM05D004666 ORTHO05D005822 1.4e-51 207.6 324 34.9
BolC5t30496H Brassica oleracea HOM05D004666 ORTHO05D005822 1.4e-51 207.6 331 34.7
Sp1g17360 Schrenkiella parvula HOM05D004666 ORTHO05D005822 1.8e-51 207.2 342 34.2
CDE08G1659 Ceratophyllum demersum HOM05D004666 ORTHO05D005822 2.4e-51 206.8 297 35.7
Duzib114G0569 Durio zibethinus HOM05D004666 ORTHO05D005822 3.1e-51 206.5 304 36.8
THA.LOC104827512 Tarenaya hassleriana HOM05D004666 ORTHO05D005822 3.1e-51 206.5 360 34.7
A06p15660 Brassica napus HOM05D004666 ORTHO05D005822 5.3e-51 205.7 329 34.7
BraA06t24675Z Brassica rapa HOM05D004666 ORTHO05D005822 5.3e-51 205.7 329 34.7
Cfa002067 Carpinus fangiana HOM05D004666 ORTHO05D005822 5.3e-51 205.7 368 35.3
C08p19490 Brassica napus HOM05D004666 ORTHO05D005822 6.9e-51 205.3 334 35.3
Nn2g14084 Nelumbo nucifera HOM05D004666 ORTHO05D005822 6.9e-51 205.3 366 35.0
vmacro22687 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 9.0e-51 204.9 335 35.2
A08p29790 Brassica napus HOM05D004666 ORTHO05D005822 1.2e-50 204.5 345 35.1
BolC8t49572H Brassica oleracea HOM05D004666 ORTHO05D005822 2.0e-50 203.8 332 35.2
C05p17890 Brassica napus HOM05D004666 ORTHO05D005822 2.6e-50 203.4 331 34.1
CARHR020050 Cardamine hirsuta HOM05D004666 ORTHO05D005822 2.6e-50 203.4 346 34.1
Oeu040521.1 Olea europaea HOM05D004666 ORTHO05D005822 2.6e-50 203.4 338 33.7
vmacro17219 Vaccinium macrocarpon HOM05D004666 ORTHO05D005822 2.6e-50 203.4 365 33.2
AT1G19485 Arabidopsis thaliana HOM05D004666 ORTHO05D005822 4.5e-50 202.6 335 34.9
Thecc.01G223300 Theobroma cacao HOM05D004666 ORTHO05D005822 5.9e-50 202.2 376 33.2
CANSAT54G2995 Cannabis sativa HOM05D004666 ORTHO05D005822 7.7e-50 201.8 339 34.5
BraA08t34913Z Brassica rapa HOM05D004666 ORTHO05D005822 1.0e-49 201.4 345 34.5
ClCG10G019140 Citrullus lanatus HOM05D004666 ORTHO05D005822 1.3e-49 201.1 358 33.0
Ciclev10011197m.g Citrus clementina HOM05D004666 ORTHO05D005822 2.9e-49 199.9 410 32.2
Thhalv10006802m.g Eutrema salsugineum HOM05D004666 ORTHO05D005822 2.9e-49 199.9 332 33.1
Lsat_1_v5_gn_1_48480 Lactuca sativa HOM05D004666 ORTHO05D005822 1.1e-48 198.0 301 37.5
Aa31LG7G4140 Aethionema arabicum HOM05D004666 ORTHO05D005822 1.4e-48 197.6 336 33.9
CiPaw.09G011000 Carya illinoinensis HOM05D004666 ORTHO05D005822 1.4e-48 197.6 363 33.6
AL1G32230 Arabidopsis lyrata HOM05D004666 ORTHO05D005822 9.4e-48 194.9 332 33.7
QL07p039593 Quercus lobata HOM05D004666 ORTHO05D005822 6.1e-47 192.2 361 33.5
MELO3C009457.2 Cucumis melo HOM05D004666 ORTHO05D005822 1.4e-46 191.0 360 32.2
Sed0022470 Sechium edule HOM05D004666 ORTHO05D005822 1.4e-46 191.0 382 30.1
Prupe.7G114200 Prunus persica HOM05D004666 ORTHO05D005822 1.8e-46 190.7 388 31.7
TWI34G1071 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 2.3e-46 190.3 371 31.3
SGA_v2.0_scaffold147G36363 Striga asiatica HOM05D004666 ORTHO05D005822 8.8e-46 188.3 333 33.0
Manes.13G012000 Manihot esculenta HOM05D004666 ORTHO05D005822 1.1e-45 188.0 403 30.0
CsaV3_3G037120 Cucumis sativus L. HOM05D004666 ORTHO05D005822 4.8e-44 182.6 391 28.9
DCAR_013376 Daucus carota HOM05D004666 ORTHO05D005822 4.8e-44 182.6 411 32.1
Potri.008G200900 Populus trichocarpa HOM05D004666 ORTHO05D005822 1.1e-43 181.4 457 28.4
arahy.Tifrunner.gnm1.ann1.G8H5C8 Arachis hypogaea HOM05D004666 ORTHO05D005822 1.4e-43 181.0 395 30.6
Migut.J00966 Erythranthe guttata HOM05D004666 ORTHO05D005822 5.3e-43 179.1 341 31.7
Nitab4.5_0000794g0050 Nicotiana tabacum HOM05D004666 ORTHO05D005822 2.0e-42 177.2 412 30.6
Sabra12G0045300 Salix brachista HOM05D004666 ORTHO05D005822 2.0e-42 177.2 439 28.2
arahy.Tifrunner.gnm1.ann1.T4KAXF Arachis hypogaea HOM05D004666 ORTHO05D005822 1.3e-41 174.5 395 30.9
Medtr1g060580 Medicago truncatula HOM05D004666 ORTHO05D005822 2.2e-41 173.7 429 28.2
SalBow3G3865 Salvia bowleyana HOM05D004666 ORTHO05D005822 2.2e-41 173.7 348 31.0
Sabra08G0160300 Salix brachista HOM05D004666 ORTHO05D005822 1.1e-40 171.4 438 28.5
arahy.Tifrunner.gnm1.ann1.WFL2XE Arachis hypogaea HOM05D004666 ORTHO05D005822 1.4e-40 171.0 392 30.4
Cc06_g05530 Coffea canephora HOM05D004666 ORTHO05D005822 1.4e-40 171.0 411 27.5
PGR142G0825 Punica granatum HOM05D004666 ORTHO05D005822 1.4e-40 171.0 403 31.3
AUR62033523 Chenopodium quinoa HOM05D004666 ORTHO05D005822 1.9e-40 170.6 472 27.5
MD12G1022600 Malus domestica HOM05D004666 ORTHO05D005822 1.9e-40 170.6 426 28.6
EL10Ac7g16949 Beta vulgaris HOM05D004666 ORTHO05D005822 5.5e-40 169.1 477 27.3
Ca_26672_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 7.2e-40 168.7 438 28.3
Ca_30723_v3 Cicer arietinum L. HOM05D004666 ORTHO05D005822 7.2e-40 168.7 438 28.3
Aqoxy3G00997 Aquilegia oxysepala HOM05D004666 ORTHO05D005822 9.4e-40 168.3 439 28.7
Lj5g0018797 Lotus japonicus HOM05D004666 ORTHO05D005822 2.7e-39 166.8 394 30.2
HanXRQChr01g0029141 Helianthus annuus HOM05D004666 ORTHO05D005822 2.3e-38 163.7 378 30.7
TWI73G1120 Tripterygium wilfordii HOM05D004666 ORTHO05D005822 6.7e-38 162.2 348 30.2
Peaxi162Scf00015g00639 Petunia axillaris HOM05D004666 ORTHO05D005822 5.7e-37 159.1 435 28.0
Psat6g082920 Pisum sativum HOM05D004666 ORTHO05D005822 7.4e-37 158.7 424 26.2
Ah.08g210700 Amaranthus hybridus HOM05D004666 ORTHO05D005822 9.7e-37 158.3 501 25.3
Rhsim09G0020300 Rhododendron simsii HOM05D004666 ORTHO05D005822 1.7e-36 157.5 281 34.5
FvH4_7g02500 Fragaria vesca HOM05D004666 ORTHO05D005822 2.8e-36 156.8 486 26.7
TPR.G35431 Trifolium pratense HOM05D004666 ORTHO05D005822 2.8e-36 156.8 462 26.4
MD09G1081300 Malus domestica HOM05D004666 ORTHO05D005822 6.3e-36 155.6 458 25.5
COL.COLO4_15658 Corchorus olitorius HOM05D004666 ORTHO05D005822 8.2e-36 155.2 514 24.5
FvH4_6g18260 Fragaria vesca HOM05D004666 ORTHO05D005822 9.1e-35 151.8 513 25.1
Solyc09g009710.4 Solanum lycopersicum HOM05D004666 ORTHO05D005822 2.0e-34 150.6 413 26.9
Sopen09g004490 Solanum pennellii HOM05D004666 ORTHO05D005822 4.5e-34 149.4 413 26.9
unitig_749.g14294 Utricularia gibba HOM05D004666 ORTHO05D005822 6.5e-33 145.6 301 31.9
FAN06G2408 Fragaria x ananassa HOM05D004666 ORTHO05D005822 1.9e-32 144.1 511 25.8
Peaxi162Scf00036g00125 Petunia axillaris HOM05D004666 ORTHO05D005822 1.9e-32 144.1 427 26.9
PGSC0003DMG400008959 Solanum tuberosum HOM05D004666 ORTHO05D005822 1.9e-32 144.1 421 25.4
Sed0014063 Sechium edule HOM05D004666 ORTHO05D005822 3.2e-32 143.3 531 23.2
FAN02G3237 Fragaria x ananassa HOM05D004666 ORTHO05D005822 4.2e-32 142.9 514 25.3
Os01g0858000 Oryza sativa ssp. japonica HOM05D004666 ORTHO05D005822 1.2e-31 141.4 140 43.6
Lalb_Chr02g0155381 Lupinus albus HOM05D004666 ORTHO05D005822 1.4e-30 137.9 524 24.0
Zm00001eb147330 Zea mays HOM05D004666 ORTHO05D005822 2.3e-30 137.1 111 51.4
Haze_19573 Corylus avellana HOM05D004666 ORTHO05D005822 4.0e-30 136.3 162 45.1
Hund26220 Selenicereus undatus HOM05D004666 ORTHO05D005822 4.4e-29 132.9 162 40.1
RcHm_v2.0_Chr4g0409331 Rosa chinensis HOM05D004666 ORTHO05D005822 1.7e-28 131.0 115 47.8
Nitab4.5_0009916g0020 Nicotiana tabacum HOM05D004666 ORTHO05D005822 2.2e-28 130.6 385 26.8
RcHm_v2.0_Chr3g0472691 Rosa chinensis HOM05D004666 ORTHO05D005822 3.7e-28 129.8 115 47.8
arahy.Tifrunner.gnm1.ann1.LSN657 Arachis hypogaea HOM05D004666 ORTHO05D005822 6.3e-28 129.0 364 27.2
PSO384G1605 Papaver somniferum HOM05D004666 ORTHO05D005822 8.2e-28 128.6 105 55.2
Sc02g0001000 Simmondsia chinensis HOM05D004666 ORTHO05D005822 1.8e-27 127.5 189 38.1
FAN05G4874 Fragaria x ananassa HOM05D004666 ORTHO05D005822 3.1e-27 126.7 108 50.0
Lj2C133G10 Lonicera japonica HOM05D004666 ORTHO05D005822 4.1e-27 126.3 102 52.0
PSO425G0050 Papaver somniferum HOM05D004666 ORTHO05D005822 4.1e-27 126.3 105 55.2
AUR62028568 Chenopodium quinoa HOM05D004666 ORTHO05D005822 2.0e-26 124.0 147 45.6
Lj5g0013478 Lotus japonicus HOM05D004666 ORTHO05D005822 2.6e-26 123.6 156 41.7
Pp3c1_31470 Physcomitrium patens HOM05D004666 ORTHO05D005822 2.6e-26 123.6 337 27.9
Eucgr.K02035 Eucalyptus grandis HOM05D004666 ORTHO05D005822 4.5e-26 122.9 107 49.5
AagrBONN_evm.TU.Sc2ySwM_344.3422 Anthoceros agrestis HOM05D004666 ORTHO05D005822 5.9e-26 122.5 339 29.8
FAN03G3209 Fragaria x ananassa HOM05D004666 ORTHO05D005822 2.9e-25 120.2 533 23.8
Cpa.g.c36918 Carica papaya HOM05D004666 ORTHO05D005822 3.8e-25 119.8 94 47.9
QL03p004438 Quercus lobata HOM05D004666 ORTHO05D005822 6.5e-25 119.0 101 48.5
Phvul.011G176600 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 1.5e-24 117.9 100 51.0
Glyma.10G068100 Glycine max HOM05D004666 ORTHO05D005822 1.9e-24 117.5 102 50.0
VMungo0720G2175 Vigna mungo HOM05D004666 ORTHO05D005822 3.2e-24 116.7 92 54.3
Phvul.007G229800 Phaseolus vulgaris HOM05D004666 ORTHO05D005822 5.5e-24 115.9 102 48.0
ECA248G2596 Erigeron canadensis HOM05D004666 ORTHO05D005822 1.2e-23 114.8 105 43.8
HPP92_015079 Vanilla planifolia HOM05D004666 ORTHO05D005822 1.2e-23 114.8 98 50.0
ECA248G3102 Erigeron canadensis HOM05D004666 ORTHO05D005822 2.7e-23 113.6 105 44.8
QL03p004414 Quercus lobata HOM05D004666 ORTHO05D005822 3.6e-23 113.2 255 30.6
FAN09G1276 Fragaria x ananassa HOM05D004666 ORTHO05D005822 2.6e-21 107.1 69 60.9
FAN05G5602 Fragaria x ananassa HOM05D004666 ORTHO05D005822 7.5e-21 105.5 69 59.4
RcHm_v2.0_Chr3g0472701 Rosa chinensis HOM05D004666 ORTHO05D005822 7.5e-21 105.5 73 56.2
CDE08G0899 Ceratophyllum demersum HOM05D007279 ORTHO05D009212 9.8e-21 105.1 81 51.9
Mapoly0021s0027 Marchantia polymorpha HOM05D004666 ORTHO05D005822 9.1e-19 98.6 306 24.8
Potri.006G036601 Populus trichocarpa HOM05D004666 ORTHO05D005822 5.0e-17 92.8 191 31.9
Hma1.2p1_0084F.1_g043500 Hydrangea macrophylla HOM05D004666 ORTHO05D005822 5.7e-13 79.3 338 23.1
FAN10G4251 Fragaria x ananassa HOM05D004666 ORTHO05D005822 4.5e-10 69.7 66 47.0
CBR_g38478 Chara braunii HOM05D004666 ORTHO05D005822 5.0e-09 66.2 68 44.1
CDE08G0815 Ceratophyllum demersum HOM05D004666 ORTHO05D005822 1.8e-06 57.8 41 56.1
RcHm_v2.0_Chr7g0223981 Rosa chinensis HOM05D004666 ORTHO05D005822 2.3e-06 57.4 45 51.1


User provided reference genes

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