Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0820G227 Amborella trichopoda HOM05D002617 ORTHO05D009035 0.0e+00 1215.3 611 100.0
TAR629G1601 Trochodendron aralioides HOM05D002617 ORTHO05D009035 9.0e-148 528.1 604 47.0
Nn3g17671 Nelumbo nucifera HOM05D002617 ORTHO05D009035 3.7e-141 506.1 599 46.9
Dinv33921 Davidia involucrata HOM05D002617 ORTHO05D009035 8.2e-141 505.0 586 45.9
QL02p053130 Quercus lobata HOM05D002617 ORTHO05D009035 3.8e-138 496.1 592 45.9
Cfa007960 Carpinus fangiana HOM05D002617 ORTHO05D009035 9.4e-137 491.5 564 46.3
CiPaw.09G147400 Carya illinoinensis HOM05D002617 ORTHO05D009035 1.1e-134 484.6 590 45.6
TWI53G1449 Tripterygium wilfordii HOM05D002617 ORTHO05D009035 1.5e-134 484.2 570 45.8
Prupe.3G241200 Prunus persica HOM05D002617 ORTHO05D009035 2.5e-134 483.4 607 43.2
Actinidia36305 Actinidia chinensis HOM05D002617 ORTHO05D009035 7.4e-134 481.9 599 44.4
MBI16_g23736_MAGBIO Magnolia biondii HOM05D002617 ORTHO05D009035 4.8e-133 479.2 609 44.2
GSVIVG01036455001 Vitis vinifera HOM05D002617 ORTHO05D009035 1.4e-132 477.6 501 48.7
FAN05G4565 Fragaria x ananassa HOM05D002617 ORTHO05D009035 2.4e-132 476.9 599 43.4
FvH4_6g45490 Fragaria vesca HOM05D002617 ORTHO05D009035 3.1e-132 476.5 599 43.4
Glyma.13G047800 Glycine max HOM05D002617 ORTHO05D009035 9.1e-132 474.9 507 47.5
HPP92_020267 Vanilla planifolia HOM05D002617 ORTHO05D009035 2.0e-131 473.8 496 49.6
Sabra04G0077100 Salix brachista HOM05D002617 ORTHO05D009035 2.9e-130 469.9 612 43.8
Hma1.2p1_0136F.1_g062000 Hydrangea macrophylla HOM05D002617 ORTHO05D009035 1.1e-129 468.0 572 44.9
Rhsim10G0064400 Rhododendron simsii HOM05D002617 ORTHO05D009035 1.9e-129 467.2 606 44.6
Phvul.005G010600 Phaseolus vulgaris HOM05D002617 ORTHO05D009035 3.2e-129 466.5 502 47.0
Ciclev10013582m.g Citrus clementina HOM05D002617 ORTHO05D009035 6.1e-128 462.2 521 45.5
DCAR_011250 Daucus carota HOM05D002617 ORTHO05D009035 7.9e-128 461.8 539 46.6
Psat1g062120 Pisum sativum HOM05D002617 ORTHO05D009035 1.4e-127 461.1 555 45.0
Cfa007963 Carpinus fangiana HOM05D002617 ORTHO05D009035 2.3e-127 460.3 606 43.4
Medtr6g016985 Medicago truncatula HOM05D002617 ORTHO05D009035 3.9e-127 459.5 555 44.7
Lj2g0019105 Lotus japonicus HOM05D002617 ORTHO05D009035 3.3e-126 456.4 556 45.5
PSO832G3224 Papaver somniferum HOM05D002617 ORTHO05D009035 3.3e-126 456.4 560 44.5
Aqoxy3G00430 Aquilegia oxysepala HOM05D002617 ORTHO05D009035 1.3e-125 454.5 570 45.1
Ca_14082_v3 Cicer arietinum L. HOM05D002617 ORTHO05D009035 3.1e-124 449.9 525 45.3
PGR042G2862 Punica granatum HOM05D002617 ORTHO05D009035 9.1e-124 448.4 603 42.8
RcHm_v2.0_Chr2g0163431 Rosa chinensis HOM05D002617 ORTHO05D009035 1.7e-122 444.1 616 39.9
FAN14G1977 Fragaria x ananassa HOM05D002617 ORTHO05D009035 3.8e-122 443.0 597 42.2
CSS0020455 Camellia sinensis var. sinensis HOM05D002617 ORTHO05D009035 5.0e-122 442.6 605 42.1
Sc11g0008110 Simmondsia chinensis HOM05D002617 ORTHO05D009035 8.0e-120 435.3 532 45.9
Thecc.04G140600 Theobroma cacao HOM05D002617 ORTHO05D009035 8.0e-120 435.3 606 40.9
PSO478G1567 Papaver somniferum HOM05D002617 ORTHO05D009035 6.7e-119 432.2 541 45.1
Oeu043862.1 Olea europaea HOM05D002617 ORTHO05D009035 7.4e-118 428.7 527 43.8
Cc07_g05000 Coffea canephora HOM05D002617 ORTHO05D009035 3.7e-117 426.4 565 41.8
Peaxi162Scf00479g00211 Petunia axillaris HOM05D002617 ORTHO05D009035 2.4e-116 423.7 510 43.9
COL.COLO4_16208 Corchorus olitorius HOM05D002617 ORTHO05D009035 7.0e-116 422.2 612 41.3
AUR62008950 Chenopodium quinoa HOM05D002617 ORTHO05D009035 9.1e-116 421.8 576 41.0
Manes.02G065900 Manihot esculenta HOM05D002617 ORTHO05D009035 5.0e-114 416.0 426 48.4
Duzib151G0578 Durio zibethinus HOM05D002617 ORTHO05D009035 5.5e-113 412.5 570 41.6
arahy.Tifrunner.gnm1.ann1.7SH6PF Arachis hypogaea HOM05D002617 ORTHO05D009035 6.1e-112 409.1 543 44.0
Lj4A130G15 Lonicera japonica HOM05D002617 ORTHO05D009035 6.1e-112 409.1 564 40.4
Lsat_1_v5_gn_2_86600 Lactuca sativa HOM05D002617 ORTHO05D009035 1.0e-111 408.3 548 42.5
Glyma.14G157500 Glycine max HOM05D002617 ORTHO05D009035 1.8e-111 407.5 404 48.5
Ah.06g191010 Amaranthus hybridus HOM05D002617 ORTHO05D009035 3.0e-111 406.8 494 42.9
Potri.004G104500 Populus trichocarpa HOM05D002617 ORTHO05D009035 2.8e-109 400.2 430 46.3
Gohir.A10G140200 Gossypium hirsutum HOM05D002617 ORTHO05D009035 3.7e-109 399.8 604 40.1
Ah.06g191000 Amaranthus hybridus HOM05D002617 ORTHO05D009035 8.3e-109 398.7 494 42.7
Gohir.D10G126600 Gossypium hirsutum HOM05D002617 ORTHO05D009035 3.1e-108 396.7 587 40.2
arahy.Tifrunner.gnm1.ann1.37DWZ9 Arachis hypogaea HOM05D002617 ORTHO05D009035 2.0e-107 394.0 501 43.3
TPR.G9672 Trifolium pratense HOM05D002617 ORTHO05D009035 2.2e-106 390.6 396 47.5
ECA238G3370 Erigeron canadensis HOM05D002617 ORTHO05D009035 6.5e-106 389.0 491 40.7
CARHR197300 Cardamine hirsuta HOM05D002617 ORTHO05D009035 1.5e-105 387.9 497 41.2
Thhalv10015867m.g Eutrema salsugineum HOM05D002617 ORTHO05D009035 7.2e-105 385.6 497 41.0
Nitab4.5_0000612g0170 Nicotiana tabacum HOM05D002617 ORTHO05D009035 9.4e-105 385.2 545 40.2
EL10Ac2g04621 Beta vulgaris HOM05D002617 ORTHO05D009035 2.7e-104 383.6 492 43.3
AL6G26890 Arabidopsis lyrata HOM05D002617 ORTHO05D009035 1.0e-103 381.7 497 40.4
Migut.H00535 Erythranthe guttata HOM05D002617 ORTHO05D009035 2.3e-103 380.6 578 38.4
Haze_14108 Corylus avellana HOM05D002617 ORTHO05D009035 4.0e-103 379.8 495 42.8
MD09G1082500 Malus domestica HOM05D002617 ORTHO05D009035 4.0e-103 379.8 405 44.9
A10p23040 Brassica napus HOM05D002617 ORTHO05D009035 8.8e-103 378.6 493 40.6
BraA10t44373Z Brassica rapa HOM05D002617 ORTHO05D009035 8.8e-103 378.6 493 40.6
AT5G16020 Arabidopsis thaliana HOM05D002617 ORTHO05D009035 1.2e-102 378.3 495 40.6
Gorai.011G139500 Gossypium raimondii HOM05D002617 ORTHO05D009035 1.2e-102 378.3 587 39.5
Sopen03g009540 Solanum pennellii HOM05D002617 ORTHO05D009035 3.4e-102 376.7 543 38.5
BcaB08g36879 Brassica carinata HOM05D002617 ORTHO05D009035 9.8e-102 375.2 497 39.6
PSO013G0088 Papaver somniferum HOM05D002617 ORTHO05D009035 2.8e-101 373.6 546 42.1
Carub.0006s1420 Capsella rubella HOM05D002617 ORTHO05D009035 6.3e-101 372.5 499 39.5
Zm00001eb161540 Zea mays HOM05D002617 ORTHO05D009035 2.0e-99 367.5 501 39.7
C09p61030 Brassica napus HOM05D002617 ORTHO05D009035 2.7e-99 367.1 487 40.2
CiPaw.09G147200 Carya illinoinensis HOM05D002617 ORTHO05D009035 4.5e-99 366.3 414 45.2
BolC9t58948H Brassica oleracea HOM05D002617 ORTHO05D009035 3.8e-98 363.2 487 39.8
THA.LOC104827464 Tarenaya hassleriana HOM05D002617 ORTHO05D009035 3.8e-98 363.2 424 43.2
SGA_v2.0_scaffold150G36618 Striga asiatica HOM05D002617 ORTHO05D009035 6.6e-98 362.5 504 40.9
BcaC04g18915 Brassica carinata HOM05D002617 ORTHO05D009035 9.5e-97 358.6 588 36.7
HanXRQChr14g0452391 Helianthus annuus HOM05D002617 ORTHO05D009035 1.2e-96 358.2 525 39.4
Aa31LG11G13590 Aethionema arabicum HOM05D002617 ORTHO05D009035 1.4e-95 354.8 499 38.9
Nitab4.5_0003461g0060 Nicotiana tabacum HOM05D002617 ORTHO05D009035 4.0e-95 353.2 616 35.7
Atru.chr8.789 Acer truncatum HOM05D002617 ORTHO05D009035 1.5e-94 351.3 327 51.1
Eucgr.J01458 Eucalyptus grandis HOM05D002617 ORTHO05D009035 4.4e-94 349.7 607 36.7
FAN09G3897 Fragaria x ananassa HOM05D002617 ORTHO05D009035 1.1e-92 345.1 487 41.3
vmacro05580 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 3.5e-91 340.1 316 51.6
SHI30168 Sapria himalayana HOM05D002617 ORTHO05D009035 1.5e-89 334.7 585 36.1
AUR62014551 Chenopodium quinoa HOM05D002617 ORTHO05D009035 1.1e-84 318.5 345 45.5
Os01g0605400 Oryza sativa ssp. japonica HOM05D002617 ORTHO05D009035 7.0e-84 315.8 594 35.4
Lalb_Chr10g0092311 Lupinus albus HOM05D002617 ORTHO05D009035 4.6e-83 313.2 332 46.4
Cpa.g.sc179.39 Carica papaya HOM05D002617 ORTHO05D009035 1.9e-81 307.8 561 35.3
CDE06G1275 Ceratophyllum demersum HOM05D002617 ORTHO05D009035 5.6e-81 306.2 353 47.3
CANSAT56G0222 Cannabis sativa HOM05D002617 ORTHO05D009035 4.7e-80 303.1 335 46.9
Solyc03g045080.3 Solanum lycopersicum HOM05D002617 ORTHO05D009035 1.2e-78 298.5 401 40.1
SalBow1G3878 Salvia bowleyana HOM05D002617 ORTHO05D009035 1.7e-77 294.7 364 42.3
unitig_899.g15127 Utricularia gibba HOM05D002617 ORTHO05D009035 4.7e-72 276.6 580 32.2
CAN.G153.15 Capsicum annuum HOM05D002617 ORTHO05D009035 2.4e-68 264.2 441 34.7
PGSC0003DMG400018767 Solanum tuberosum HOM05D002617 ORTHO05D009035 9.6e-65 252.3 410 35.9
FAN02G3888 Fragaria x ananassa HOM05D002617 ORTHO05D009035 1.4e-63 248.4 233 50.6
Actinidia18118 Actinidia chinensis HOM05D002617 ORTHO05D009035 2.2e-53 214.5 192 51.0
FAN02G3008 Fragaria x ananassa HOM05D002617 ORTHO05D009035 2.4e-47 194.5 382 34.3
CANSAT56G4171 Cannabis sativa HOM05D002617 ORTHO05D009035 2.1e-43 181.4 185 48.6
CANSAT56G3033 Cannabis sativa HOM05D002617 ORTHO05D009035 9.6e-41 172.6 297 37.4
CiPaw.09G170800 Carya illinoinensis HOM05D002617 ORTHO05D009035 1.0e-34 152.5 228 42.5
arahy.Tifrunner.gnm1.ann1.3A0B2Z Arachis hypogaea HOM05D002617 ORTHO05D009035 2.7e-27 127.9 173 45.7
Haze_14109 Corylus avellana HOM05D002617 ORTHO05D006076 2.7e-27 127.9 163 46.6
Haze_14111 Corylus avellana HOM05D002617 ORTHO05D006076 1.3e-26 125.6 143 51.7
SMO116G0487 Selaginella moellendorffii HOM05D002617 ORTHO05D009035 1.9e-25 121.7 203 32.5
vmacro05579 Vaccinium macrocarpon HOM05D002617 ORTHO05D009035 9.7e-25 119.4 265 37.0
MSTRG.23827 Avicennia marina HOM05D002617 ORTHO05D009035 6.3e-24 116.7 276 36.2
CBR_g48653 Chara braunii HOM05D001394 ORTHO05D001237 2.9e-21 107.8 213 31.5
TAR705G0001 Trochodendron aralioides HOM05D001309 ORTHO05D000385 2.5e-12 78.2 59 55.9
Lalb_Chr10g0092321 Lupinus albus HOM05D002617 ORTHO05D009035 1.1e-07 62.8 68 47.1
Lalb_Chr10g0092331 Lupinus albus HOM05D002617 ORTHO05D009035 1.8e-07 62.0 141 36.2
TAR629G1810 Trochodendron aralioides HOM05D004423 ORTHO05D005464 2.6e-06 58.2 42 54.8


User provided reference genes

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