Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0820G206 Amborella trichopoda HOM05D007282 ORTHO05D009214 3.4e-112 408.3 201 100.0
Nn6g34828 Nelumbo nucifera HOM05D007282 ORTHO05D009214 2.1e-53 213.0 146 71.9
PGR142G4217 Punica granatum HOM05D007282 ORTHO05D009214 1.4e-52 210.3 141 73.0
TWI53G0193 Tripterygium wilfordii HOM05D007282 ORTHO05D009214 3.1e-52 209.1 178 62.4
CiPaw.09G016500 Carya illinoinensis HOM05D007282 ORTHO05D009214 4.0e-52 208.8 142 67.6
Haze_19645 Corylus avellana HOM05D007282 ORTHO05D009214 4.0e-52 208.8 142 69.0
QL07p038317 Quercus lobata HOM05D007282 ORTHO05D009214 3.4e-51 205.7 200 55.5
Gohir.D09G133600 Gossypium hirsutum HOM05D007282 ORTHO05D009214 4.4e-51 205.3 188 58.5
Gorai.006G153100 Gossypium raimondii HOM05D007282 ORTHO05D009214 7.5e-51 204.5 188 58.0
Gohir.A09G141100 Gossypium hirsutum HOM05D007282 ORTHO05D009214 2.2e-50 203.0 188 58.0
Hma1.2p1_0769F.1_g215750 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 2.9e-50 202.6 142 69.7
CsaV3_6G040780 Cucumis sativus L. HOM05D007282 ORTHO05D009214 3.7e-50 202.2 147 69.4
Eucgr.K02566 Eucalyptus grandis HOM05D007282 ORTHO05D009214 8.3e-50 201.1 177 60.5
Sed0020389 Sechium edule HOM05D007282 ORTHO05D009214 1.9e-49 199.9 199 54.8
Dinv21175 Davidia involucrata HOM05D007282 ORTHO05D009214 4.1e-49 198.7 141 68.8
TAR623G0904 Trochodendron aralioides HOM05D007282 ORTHO05D009214 4.1e-49 198.7 146 66.4
MELO3C024557.2 Cucumis melo HOM05D007282 ORTHO05D009214 5.4e-49 198.4 147 68.7
Thecc.05G094100 Theobroma cacao HOM05D007282 ORTHO05D009214 7.0e-49 198.0 206 53.4
Glyma.02G201500 Glycine max HOM05D007282 ORTHO05D009214 1.2e-48 197.2 141 68.8
SGA_v2.0_scaffold31G12895 Striga asiatica HOM05D007282 ORTHO05D009214 1.2e-48 197.2 178 59.0
Glyma.10G075000 Glycine max HOM05D007282 ORTHO05D009214 1.6e-48 196.8 190 56.8
Sabra06G0161800 Salix brachista HOM05D007282 ORTHO05D009214 1.6e-48 196.8 142 68.3
SalBow3G4659 Salvia bowleyana HOM05D007282 ORTHO05D009214 1.6e-48 196.8 201 52.2
Oeu025665.1 Olea europaea HOM05D007282 ORTHO05D009214 2.0e-48 196.4 124 74.2
Potri.006G210000 Populus trichocarpa HOM05D007282 ORTHO05D009214 2.7e-48 196.1 194 56.2
ClCG04G010160 Citrullus lanatus HOM05D007282 ORTHO05D009214 3.5e-48 195.7 142 69.0
CANSAT64G2352 Cannabis sativa HOM05D007282 ORTHO05D009214 7.8e-48 194.5 139 67.6
Atru.chr8.1455 Acer truncatum HOM05D007282 ORTHO05D009214 1.0e-47 194.1 144 66.0
MSTRG.19274 Avicennia marina HOM05D007282 ORTHO05D009214 1.0e-47 194.1 144 66.0
CSS0014712 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 1.0e-47 194.1 138 69.6
CSS0036453 Camellia sinensis var. sinensis HOM05D007282 ORTHO05D009214 1.0e-47 194.1 138 69.6
Lalb_Chr06g0172471 Lupinus albus HOM05D007282 ORTHO05D009214 1.0e-47 194.1 145 67.6
Duzib093G1732 Durio zibethinus HOM05D007282 ORTHO05D009214 1.3e-47 193.7 204 53.4
Zm00001eb366810 Zea mays HOM05D007282 ORTHO05D009214 1.3e-47 193.7 152 60.5
Manes.08G027500 Manihot esculenta HOM05D000972 ORTHO05D007713 1.7e-47 193.4 187 56.1
vmacro07443 Vaccinium macrocarpon HOM05D007282 ORTHO05D009214 1.7e-47 193.4 144 68.8
Lj2A142T14 Lonicera japonica HOM05D007282 ORTHO05D009214 2.3e-47 193.0 142 65.5
Migut.J01006 Erythranthe guttata HOM05D007282 ORTHO05D009214 3.9e-47 192.2 141 66.0
PSO384G4616 Papaver somniferum HOM05D007282 ORTHO05D009214 5.0e-47 191.8 146 63.0
Lsat_1_v5_gn_5_165601 Lactuca sativa HOM05D007282 ORTHO05D009214 8.6e-47 191.0 138 66.7
HPP92_001104 Vanilla planifolia HOM05D007282 ORTHO05D009214 1.1e-46 190.7 136 69.1
Solyc09g010120.2 Solanum lycopersicum HOM05D007282 ORTHO05D009214 1.5e-46 190.3 201 54.2
AT2G36145 Arabidopsis thaliana HOM05D007282 ORTHO05D009214 1.9e-46 189.9 142 65.5
Ca_30898_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 1.9e-46 189.9 141 66.7
Peaxi162Scf00069g00612 Petunia axillaris HOM05D007282 ORTHO05D009214 2.5e-46 189.5 142 64.8
Sopen09g004860 Solanum pennellii HOM05D007282 ORTHO05D009214 2.5e-46 189.5 201 54.2
Lj5g0026678 Lotus japonicus HOM05D007282 ORTHO05D009214 3.3e-46 189.1 141 65.2
Aqoxy4G02730 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 4.3e-46 188.7 146 65.1
AL4G32230 Arabidopsis lyrata HOM05D007282 ORTHO05D009214 4.3e-46 188.7 142 65.5
Prupe.7G102300 Prunus persica HOM05D007282 ORTHO05D009214 1.6e-45 186.8 204 53.9
PGSC0003DMG400008863 Solanum tuberosum HOM05D007282 ORTHO05D009214 2.1e-45 186.4 201 52.7
CARHR130380 Cardamine hirsuta HOM05D007282 ORTHO05D009214 2.8e-45 186.0 141 65.2
Cpa.g.sc104.101 Carica papaya HOM05D007282 ORTHO05D009214 3.6e-45 185.7 148 64.2
Thhalv10017280m.g Eutrema salsugineum HOM05D007282 ORTHO05D009214 3.6e-45 185.7 158 58.2
Sc02g0000410 Simmondsia chinensis HOM05D007282 ORTHO05D009214 3.6e-45 185.7 146 64.4
Phvul.007G163900 Phaseolus vulgaris HOM05D007282 ORTHO05D009214 4.7e-45 185.3 144 63.2
Aa31LG5G21280 Aethionema arabicum HOM05D007282 ORTHO05D009214 6.2e-45 184.9 161 55.9
ECA248G2482 Erigeron canadensis HOM05D005132 ORTHO05D005823 8.0e-45 184.5 141 62.4
Carub.0004s1791 Capsella rubella HOM05D007282 ORTHO05D009214 1.1e-44 184.1 195 51.3
Os01g0862200 Oryza sativa ssp. japonica HOM05D007282 ORTHO05D009214 1.1e-44 184.1 157 58.6
PSO339G4969 Papaver somniferum HOM05D007282 ORTHO05D009214 1.1e-44 184.1 202 48.5
Rhsim03G0070300 Rhododendron simsii HOM05D007282 ORTHO05D009214 1.4e-44 183.7 145 66.2
A04p27670 Brassica napus HOM05D000972 ORTHO05D009214 2.3e-44 183.0 192 51.6
BraA04t18262Z Brassica rapa HOM05D000972 ORTHO05D001783 2.3e-44 183.0 192 51.6
FAN02G3890 Fragaria x ananassa HOM05D007282 ORTHO05D009214 2.3e-44 183.0 144 62.5
RcHm_v2.0_Chr3g0474621 Rosa chinensis HOM05D007282 ORTHO05D009214 3.1e-44 182.6 143 62.9
GSVIVG01033882001 Vitis vinifera HOM05D007282 ORTHO05D009214 4.0e-44 182.2 116 75.0
BcaC02g07630 Brassica carinata HOM05D007282 ORTHO05D009214 5.2e-44 181.8 193 50.3
FvH4_6g19360 Fragaria vesca HOM05D007282 ORTHO05D009214 6.8e-44 181.4 144 61.8
Sp4g18380 Schrenkiella parvula HOM05D007282 ORTHO05D009214 8.9e-44 181.0 125 65.6
BolC4t27996H Brassica oleracea HOM05D007282 ORTHO05D009214 1.5e-43 180.3 205 46.8
Cc00_g15490 Coffea canephora HOM05D007282 ORTHO05D009214 1.5e-43 180.3 116 74.1
HanXRQChr13g0390101 Helianthus annuus HOM05D007282 ORTHO05D009214 2.6e-43 179.5 179 52.0
THA.LOC104799754 Tarenaya hassleriana HOM05D007282 ORTHO05D009214 3.4e-43 179.1 134 67.2
BcaB06g28919 Brassica carinata HOM05D000972 ORTHO05D001783 4.4e-43 178.7 124 65.3
TPR.G14774 Trifolium pratense HOM05D007282 ORTHO05D009214 5.8e-43 178.3 153 59.5
Psat6g084240 Pisum sativum HOM05D007282 ORTHO05D009214 1.3e-42 177.2 189 52.4
CDE08G0791 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 5.4e-41 171.8 124 67.7
Medtr1g059660 Medicago truncatula HOM05D007282 ORTHO05D009214 3.5e-40 169.1 189 50.3
Hund03936 Selenicereus undatus HOM05D007282 ORTHO05D009214 1.0e-39 167.5 184 48.4
AUR62036998 Chenopodium quinoa HOM05D007282 ORTHO05D009214 1.1e-38 164.1 145 56.6
DCAR_013409 Daucus carota HOM05D007282 ORTHO05D009214 1.5e-38 163.7 115 69.6
CDE08G0228 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 2.5e-38 162.9 123 67.5
CDE02G2307 Ceratophyllum demersum HOM05D007282 ORTHO05D009214 2.8e-37 159.5 182 50.5
C04p65190 Brassica napus HOM05D007282 ORTHO05D009214 4.7e-37 158.7 194 47.9
Hma1.2p1_0769F.1_g215760 Hydrangea macrophylla HOM05D007282 ORTHO05D009214 4.4e-35 152.1 140 57.9
Nitab4.5_0001875g0020 Nicotiana tabacum HOM05D007282 ORTHO05D009214 9.9e-35 151.0 187 47.6
AUR62006220 Chenopodium quinoa HOM05D007282 ORTHO05D009214 1.1e-33 147.5 145 51.0
COL.COLO4_03547 Corchorus olitorius HOM05D007282 ORTHO05D009214 1.4e-33 147.1 146 56.2
Pp3c14_14160 Physcomitrium patens HOM05D007282 ORTHO05D009214 1.4e-33 147.1 138 52.9
arahy.Tifrunner.gnm1.ann1.LMCN1R Arachis hypogaea HOM05D007282 ORTHO05D009214 9.2e-33 144.4 194 44.3
arahy.Tifrunner.gnm1.ann1.TUP4W7 Arachis hypogaea HOM05D007282 ORTHO05D009214 9.2e-33 144.4 194 44.3
EL10Ac7g16881 Beta vulgaris HOM05D007282 ORTHO05D009214 6.6e-31 138.3 181 45.3
Mapoly0153s0036 Marchantia polymorpha HOM05D007282 ORTHO05D009214 6.6e-31 138.3 141 48.9
SMO353G0249 Selaginella moellendorffii HOM05D007282 ORTHO05D009214 6.6e-31 138.3 130 51.5
AagrBONN_evm.TU.Sc2ySwM_344.5307 Anthoceros agrestis HOM05D007282 ORTHO05D009214 7.3e-30 134.8 138 50.0
Ca_22305_v3 Cicer arietinum L. HOM05D007282 ORTHO05D009214 3.5e-24 115.9 322 29.2
MD12G1029300 Malus domestica HOM05D007282 ORTHO05D009214 1.9e-22 110.2 84 64.3
Aqoxy1G00013 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 4.3e-22 109.0 84 63.1
Aqoxy2G01255 Aquilegia oxysepala HOM05D007282 ORTHO05D009214 7.3e-22 108.2 97 57.7
MD14G1029600 Malus domestica HOM05D007282 ORTHO05D009214 4.7e-21 105.5 84 63.1
DCAR_031561 Daucus carota HOM05D007282 ORTHO05D009214 9.3e-17 91.3 82 56.1
TAR369G0436 Trochodendron aralioides HOM05D007282 ORTHO05D009214 5.3e-12 75.5 71 53.5
Actinidia05405 Actinidia chinensis HOM05D005132 ORTHO05D005823 2.0e-11 73.6 52 67.3
PRCOL_00001877 Prasinoderma coloniale HOM05D007282 ORTHO05D009214 4.3e-06 55.8 118 33.9


User provided reference genes

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