Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0820G192 Amborella trichopoda HOM05D003745 ORTHO05D004215 1.3e-51 206.1 101 100.0
CiPaw.10G005500 Carya illinoinensis HOM05D003745 ORTHO05D004215 9.4e-10 67.0 87 43.7
Duzib106G0076 Durio zibethinus HOM05D003745 ORTHO05D004215 1.0e-08 63.5 87 46.0
Dinv21253 Davidia involucrata HOM05D003745 ORTHO05D004215 2.3e-08 62.4 99 41.4
Dinv19830 Davidia involucrata HOM05D003745 ORTHO05D004215 3.0e-08 62.0 99 40.4
Glyma.10G066400 Glycine max HOM05D003745 ORTHO05D004215 4.0e-08 61.6 92 40.2
Nn6g35042 Nelumbo nucifera HOM05D003745 ORTHO05D004215 1.1e-07 60.1 77 46.8
PSO063G0377 Papaver somniferum HOM05D003745 ORTHO05D004215 1.5e-07 59.7 97 43.3
PSO339G1716 Papaver somniferum HOM05D003745 ORTHO05D004215 1.5e-07 59.7 94 43.6
Thecc.05G081300 Theobroma cacao HOM05D003745 ORTHO05D004215 2.0e-07 59.3 90 44.4
CiPaw.09G008800 Carya illinoinensis HOM05D003745 ORTHO05D004215 2.6e-07 58.9 91 42.9
Peaxi162Scf00157g00066 Petunia axillaris HOM05D003745 ORTHO05D004215 2.6e-07 58.9 90 42.2
Psat7g007360 Pisum sativum HOM05D003745 ORTHO05D004215 2.6e-07 58.9 92 41.3
SalBow6G4256 Salvia bowleyana HOM05D003745 ORTHO05D004215 3.3e-07 58.5 90 44.4
MD12G1018200 Malus domestica HOM05D003745 ORTHO05D004215 4.4e-07 58.2 57 56.1
Manes.09G058940 Manihot esculenta HOM05D003745 ORTHO05D004215 4.4e-07 58.2 94 42.6
PSO384G0932 Papaver somniferum HOM05D003745 ORTHO05D004215 4.4e-07 58.2 92 42.4
Actinidia11335 Actinidia chinensis HOM05D003745 ORTHO05D004215 5.7e-07 57.8 83 43.4
Duzib093G0672 Durio zibethinus HOM05D003745 ORTHO05D004215 5.7e-07 57.8 92 41.3
Nn2g14004 Nelumbo nucifera HOM05D003745 ORTHO05D004215 5.7e-07 57.8 91 45.1
Duzib128G0603 Durio zibethinus HOM05D003745 ORTHO05D004215 7.5e-07 57.4 90 42.2
Aqoxy2G01397 Aquilegia oxysepala HOM05D003745 ORTHO05D004215 9.7e-07 57.0 106 38.7
TWI77G0164 Tripterygium wilfordii HOM05D003745 ORTHO05D004215 9.7e-07 57.0 93 45.2
GSVIVG01031398001 Vitis vinifera HOM05D003745 ORTHO05D004215 9.7e-07 57.0 91 41.8
Gohir.A09G093200 Gossypium hirsutum HOM05D003745 ORTHO05D004215 1.3e-06 56.6 88 40.9
Lj3g0011252 Lotus japonicus HOM05D003745 ORTHO05D004215 1.3e-06 56.6 101 41.6
Peaxi162Scf00433g00025 Petunia axillaris HOM05D003745 ORTHO05D004215 1.3e-06 56.6 102 42.2
QL07p040518 Quercus lobata HOM05D003745 ORTHO05D004215 1.3e-06 56.6 86 36.0
Cfa010081 Carpinus fangiana HOM05D003745 ORTHO05D004215 1.7e-06 56.2 88 42.0
Gohir.D09G093000 Gossypium hirsutum HOM05D003745 ORTHO05D004215 1.7e-06 56.2 88 40.9
Dinv29425 Davidia involucrata HOM05D003745 ORTHO05D004215 2.2e-06 55.8 88 39.8
Lsat_1_v5_gn_6_41120 Lactuca sativa HOM05D003745 ORTHO05D004215 2.2e-06 55.8 66 48.5
Medtr1g061120 Medicago truncatula HOM05D003745 ORTHO05D004215 2.2e-06 55.8 96 39.6
PSO339G5919 Papaver somniferum HOM05D003745 ORTHO05D004215 2.2e-06 55.8 92 41.3
Phvul.007G223101 Phaseolus vulgaris HOM05D003745 ORTHO05D004215 2.2e-06 55.8 91 39.6
TPR.G5649 Trifolium pratense HOM05D003745 ORTHO05D004215 2.2e-06 55.8 91 40.7
Atru.chr8.1631 Acer truncatum HOM05D003745 ORTHO05D004215 2.8e-06 55.5 97 38.1
FAN11G3796 Fragaria x ananassa HOM05D003745 ORTHO05D004215 2.8e-06 55.5 91 42.9
CAN.G919.7 Capsicum annuum HOM05D003745 ORTHO05D004215 3.7e-06 55.1 104 34.6
TWI74G0799 Tripterygium wilfordii HOM05D003745 ORTHO05D004215 3.7e-06 55.1 88 42.0
Actinidia07207 Actinidia chinensis HOM05D003745 ORTHO05D004215 4.8e-06 54.7 101 34.7
Ciclev10003706m.g Citrus clementina HOM05D003745 ORTHO05D004215 4.8e-06 54.7 101 37.6
FAN21G0140 Fragaria x ananassa HOM05D003745 ORTHO05D004215 4.8e-06 54.7 91 42.9
Glyma.12G181700 Glycine max HOM05D003745 ORTHO05D004215 4.8e-06 54.7 100 46.0
TAR636G1780 Trochodendron aralioides HOM05D003745 ORTHO05D004215 4.8e-06 54.7 44 63.6
Cc06_g05290 Coffea canephora HOM05D003745 ORTHO05D004215 6.3e-06 54.3 43 60.5
DCAR_006146 Daucus carota HOM05D003745 ORTHO05D004215 6.3e-06 54.3 88 39.8
FvH4_3g29900 Fragaria vesca HOM05D003745 ORTHO05D004215 6.3e-06 54.3 91 42.9
Rhsim03G0081200 Rhododendron simsii HOM05D003745 ORTHO05D004215 6.3e-06 54.3 47 53.2
A10p32390 Brassica napus HOM05D003745 ORTHO05D004215 8.2e-06 53.9 43 51.2
C09p73210 Brassica napus HOM05D003745 ORTHO05D004215 8.2e-06 53.9 43 51.2
BolC9t60056H Brassica oleracea HOM05D003745 ORTHO05D004215 8.2e-06 53.9 43 51.2
BraA10t45279Z Brassica rapa HOM05D003745 ORTHO05D004215 8.2e-06 53.9 43 51.2
CSS0050359 Camellia sinensis var. sinensis HOM05D003745 ORTHO05D004215 8.2e-06 53.9 93 38.7
Glyma.13G151500 Glycine max HOM05D003745 ORTHO05D004215 8.2e-06 53.9 92 38.0
Gorai.006G109700 Gossypium raimondii HOM05D003745 ORTHO05D004215 8.2e-06 53.9 89 42.7
GSVIVG01033785001 Vitis vinifera HOM05D003745 ORTHO05D004215 8.2e-06 53.9 43 62.8


User provided reference genes

Program Settings