Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 2.5e-44 181.8 95 100.0
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 3.8e-29 131.3 97 76.3
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 6.1e-27 124.0 74 86.5
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 5.7e-17 90.9 64 76.6
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 9.8e-17 90.1 88 59.1
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 1.7e-16 89.4 67 71.6
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 8.3e-16 87.0 71 66.2
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 1.1e-15 86.7 67 70.1
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 1.8e-15 85.9 62 72.6
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 2.4e-15 85.5 86 58.1
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 2.4e-15 85.5 70 65.7
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 3.1e-15 85.1 71 66.2
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 3.1e-15 85.1 62 75.8
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 4.1e-15 84.7 67 67.2
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 4.1e-15 84.7 69 68.1
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 5.4e-15 84.3 59 74.6
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 5.4e-15 84.3 67 67.2
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 5.4e-15 84.3 67 70.1
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 5.4e-15 84.3 78 61.5
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 7.0e-15 84.0 67 68.7
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 7.0e-15 84.0 61 70.5
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 7.0e-15 84.0 61 70.5
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 7.0e-15 84.0 67 67.2
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 1.2e-14 83.2 75 60.0
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 1.6e-14 82.8 67 68.7
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 1.6e-14 82.8 75 62.7
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 2.0e-14 82.4 67 67.2
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 2.0e-14 82.4 62 72.6
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 2.0e-14 82.4 67 67.2
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 2.7e-14 82.0 57 75.4
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 2.7e-14 82.0 70 62.9
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 3.5e-14 81.6 62 71.0
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 3.5e-14 81.6 62 71.0
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 3.5e-14 81.6 62 71.0
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 3.5e-14 81.6 69 62.3
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.5e-14 81.6 69 62.3
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.5e-14 81.6 69 62.3
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.5e-14 81.6 69 62.3
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.5e-14 81.6 69 62.3
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 3.5e-14 81.6 69 62.3
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 3.5e-14 81.6 62 71.0
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 3.5e-14 81.6 62 72.6
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 4.5e-14 81.3 60 73.3
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 4.5e-14 81.3 67 65.7
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 4.5e-14 81.3 74 63.5
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 5.9e-14 80.9 62 69.4
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 5.9e-14 80.9 59 72.9
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 7.7e-14 80.5 62 71.0
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 7.7e-14 80.5 62 71.0
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 7.7e-14 80.5 62 71.0
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 7.7e-14 80.5 62 71.0
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 7.7e-14 80.5 62 71.0
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 7.7e-14 80.5 74 62.2
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 7.7e-14 80.5 62 71.0
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 7.7e-14 80.5 55 74.5
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 7.7e-14 80.5 55 74.5
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 7.7e-14 80.5 55 74.5
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 7.7e-14 80.5 71 60.6
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 7.7e-14 80.5 77 58.4
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 7.7e-14 80.5 67 65.7
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 1.0e-13 80.1 57 71.9
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 1.0e-13 80.1 69 63.8
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 1.0e-13 80.1 57 73.7
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 1.0e-13 80.1 70 64.3
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 1.0e-13 80.1 70 64.3
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 1.0e-13 80.1 67 65.7
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 1.3e-13 79.7 68 64.7
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 1.3e-13 79.7 57 71.9
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 1.3e-13 79.7 57 71.9
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 1.7e-13 79.3 62 71.0
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 1.7e-13 79.3 65 64.6
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 2.3e-13 79.0 62 69.4
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 2.3e-13 79.0 61 68.9
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 2.9e-13 78.6 70 64.3
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 2.9e-13 78.6 62 71.0
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 2.9e-13 78.6 62 71.0
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 3.8e-13 78.2 67 62.7
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 3.8e-13 78.2 74 59.5
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 3.8e-13 78.2 67 58.2
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 3.8e-13 78.2 67 58.2
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 5.0e-13 77.8 69 63.8
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 5.0e-13 77.8 74 63.5
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 5.0e-13 77.8 55 70.9
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 6.5e-13 77.4 63 66.7
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 6.5e-13 77.4 69 63.8
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 6.5e-13 77.4 67 65.7
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 6.5e-13 77.4 65 64.6
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 1.5e-12 76.3 67 59.7
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 1.5e-12 76.3 57 68.4
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 2.5e-12 75.5 54 72.2
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 4.2e-12 74.7 62 66.1
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 9.5e-12 73.6 63 61.9
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 1.6e-11 72.8 67 59.7
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 2.1e-11 72.4 79 57.0
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 2.1e-11 72.4 54 68.5
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 2.8e-11 72.0 61 62.3
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 4.7e-11 71.2 71 56.3
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 4.7e-11 71.2 67 58.2
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 4.7e-11 71.2 81 51.9
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 1.4e-10 69.7 72 54.2
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 1.4e-10 69.7 73 53.4
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 1.4e-10 69.7 73 56.2
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 2.3e-10 68.9 67 52.2
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 3.0e-10 68.6 90 48.9
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 8.8e-10 67.0 62 61.3
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 8.8e-10 67.0 73 53.4
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 1.2e-09 66.6 67 55.2
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 2.6e-09 65.5 62 54.8
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 4.4e-09 64.7 72 48.6
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 9.8e-09 63.5 78 48.7
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 6.3e-08 60.8 83 47.0
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 1.4e-07 59.7 42 78.6
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 1.4e-07 59.7 69 55.1
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 9.2e-07 57.0 52 65.4
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 1.6e-06 56.2 67 55.2
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 2.7e-06 55.5 61 47.5
Dinv35040 Davidia involucrata HOM05D006711 ORTHO05D008104 5.9e-06 54.3 40 70.0
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 7.8e-06 53.9 42 71.4
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 7.8e-06 53.9 63 49.2


User provided reference genes

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