Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0820G138 Amborella trichopoda HOM05D006704 ORTHO05D008635 9.1e-178 626.7 298 100.0
MBI17_g08127_MAGBIO Magnolia biondii HOM05D006704 ORTHO05D008635 8.1e-118 427.6 315 64.8
TAR633G0569 Trochodendron aralioides HOM05D006704 ORTHO05D008635 8.9e-117 424.1 311 65.9
CDE06G2417 Ceratophyllum demersum HOM05D006704 ORTHO05D008635 7.6e-116 421.0 303 66.3
Manes.11G160500 Manihot esculenta HOM05D006704 ORTHO05D008635 3.2e-114 415.6 311 65.6
Nn6g34957 Nelumbo nucifera HOM05D006704 ORTHO05D008635 2.1e-113 412.9 310 64.2
Sabra04G0124100 Salix brachista HOM05D006704 ORTHO05D008635 4.6e-113 411.8 311 65.9
Ciclev10028571m.g Citrus clementina HOM05D006704 ORTHO05D008635 1.0e-112 410.6 311 65.6
Gohir.A05G081700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 3.0e-112 409.1 311 65.0
GSVIVG01036154001 Vitis vinifera HOM05D006704 ORTHO05D008635 3.9e-112 408.7 298 66.1
Gorai.009G086600 Gossypium raimondii HOM05D006704 ORTHO05D008635 5.1e-112 408.3 311 64.6
Os01g0858700 Oryza sativa ssp. japonica HOM05D006704 ORTHO05D008635 5.1e-112 408.3 308 62.3
Potri.004G184400 Populus trichocarpa HOM05D006704 ORTHO05D008635 1.5e-111 406.8 311 64.3
PSO339G4200 Papaver somniferum HOM05D006704 ORTHO05D008635 1.9e-111 406.4 305 64.9
Duzib170G0143 Durio zibethinus HOM05D006704 ORTHO05D008635 7.3e-111 404.4 311 64.6
Gohir.D05G084700 Gossypium hirsutum HOM05D006704 ORTHO05D008635 1.3e-110 403.7 311 64.0
PSO384G3226 Papaver somniferum HOM05D006704 ORTHO05D008635 1.3e-110 403.7 305 63.9
PGSC0003DMG400007144 Solanum tuberosum HOM05D006704 ORTHO05D008635 2.1e-110 402.9 300 65.0
Thecc.09G286000 Theobroma cacao HOM05D006704 ORTHO05D008635 2.8e-110 402.5 311 63.3
HPP92_000003 Vanilla planifolia HOM05D006704 ORTHO05D008635 2.8e-110 402.5 306 64.4
Atru.chr3.3296 Acer truncatum HOM05D006704 ORTHO05D008635 3.6e-110 402.1 313 63.3
Aqoxy2G01240 Aquilegia oxysepala HOM05D006704 ORTHO05D008635 4.8e-110 401.7 309 62.8
Dinv29464 Davidia involucrata HOM05D006704 ORTHO05D008635 8.1e-110 401.0 307 65.1
TWI31G0547 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 1.4e-109 400.2 311 64.0
Solyc06g074380.3 Solanum lycopersicum HOM05D006704 ORTHO05D008635 1.8e-109 399.8 300 64.3
Nitab4.5_0015718g0010 Nicotiana tabacum HOM05D006704 ORTHO05D008635 3.1e-109 399.1 298 65.1
PGR119G0959 Punica granatum HOM05D006704 ORTHO05D008635 3.1e-109 399.1 306 63.7
Sopen06g030840 Solanum pennellii HOM05D006704 ORTHO05D008635 3.1e-109 399.1 300 64.3
RcHm_v2.0_Chr5g0044201 Rosa chinensis HOM05D006704 ORTHO05D008635 4.0e-109 398.7 306 63.4
THA.LOC104800539 Tarenaya hassleriana HOM05D006704 ORTHO05D008635 1.5e-108 396.7 305 61.6
Cfa010042 Carpinus fangiana HOM05D006704 ORTHO05D008635 2.0e-108 396.4 309 62.5
COL.COLO4_19912 Corchorus olitorius HOM05D006704 ORTHO05D008635 2.0e-108 396.4 311 63.0
Lsat_1_v5_gn_6_40481 Lactuca sativa HOM05D006704 ORTHO05D008635 2.0e-108 396.4 299 64.2
Nitab4.5_0002002g0030 Nicotiana tabacum HOM05D006704 ORTHO05D008635 7.6e-108 394.4 298 64.4
QL01p012560 Quercus lobata HOM05D006704 ORTHO05D008635 9.9e-108 394.0 309 63.1
Ca_19394_v3 Cicer arietinum L. HOM05D006704 ORTHO05D008635 1.3e-107 393.7 311 63.7
TPR.G17210 Trifolium pratense HOM05D006704 ORTHO05D008635 1.7e-107 393.3 310 62.6
arahy.Tifrunner.gnm1.ann1.GMPU9C Arachis hypogaea HOM05D006704 ORTHO05D008635 2.2e-107 392.9 309 61.5
CAN.G919.21 Capsicum annuum HOM05D006704 ORTHO05D008635 2.2e-107 392.9 300 63.7
FvH4_3g24630 Fragaria vesca HOM05D006704 ORTHO05D008635 2.2e-107 392.9 309 62.1
FAN11G2081 Fragaria x ananassa HOM05D006704 ORTHO05D008635 2.2e-107 392.9 309 62.1
Psat7g188440 Pisum sativum HOM05D006704 ORTHO05D008635 2.2e-107 392.9 310 62.9
Zm00001eb147310 Zea mays HOM05D006704 ORTHO05D008635 2.2e-107 392.9 307 60.6
ECA233G1041 Erigeron canadensis HOM05D006704 ORTHO05D008635 2.9e-107 392.5 300 64.0
Medtr4g053410 Medicago truncatula HOM05D006704 ORTHO05D008635 2.9e-107 392.5 310 62.9
SalBow6G4963 Salvia bowleyana HOM05D006704 ORTHO05D008635 2.9e-107 392.5 310 61.3
Cc01_g09380 Coffea canephora HOM05D006704 ORTHO05D008635 3.8e-107 392.1 313 62.0
Glyma.11G184500 Glycine max HOM05D006704 ORTHO05D008635 3.8e-107 392.1 310 61.3
Lj3g0010910 Lotus japonicus HOM05D006704 ORTHO05D008635 3.8e-107 392.1 310 61.3
Sed0027356 Sechium edule HOM05D006704 ORTHO05D008635 4.9e-107 391.7 313 59.7
arahy.Tifrunner.gnm1.ann1.JHI8LQ Arachis hypogaea HOM05D006704 ORTHO05D008635 6.4e-107 391.3 309 61.5
Glyma.12G087800 Glycine max HOM05D006704 ORTHO05D008635 6.4e-107 391.3 310 62.3
HanXRQChr12g0364591 Helianthus annuus HOM05D006704 ORTHO05D008635 6.4e-107 391.3 300 63.3
MD03G1142000 Malus domestica HOM05D006704 ORTHO05D008635 6.4e-107 391.3 310 62.3
vmacro03306 Vaccinium macrocarpon HOM05D006704 ORTHO05D008635 8.4e-107 391.0 312 61.5
FAN21G3586 Fragaria x ananassa HOM05D006704 ORTHO05D008635 1.1e-106 390.6 307 62.2
Nitab4.5_0002002g0020 Nicotiana tabacum HOM05D006704 ORTHO05D008635 1.1e-106 390.6 295 64.1
DCAR_006157 Daucus carota HOM05D006704 ORTHO05D008635 1.4e-106 390.2 304 61.2
MELO3C004818.2 Cucumis melo HOM05D006704 ORTHO05D008635 4.2e-106 388.7 312 60.6
Hma1.2p1_0305F.1_g119670 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 4.2e-106 388.7 300 62.7
SGA_v2.0_scaffold22G09877 Striga asiatica HOM05D006704 ORTHO05D008635 4.2e-106 388.7 301 62.5
CsaV3_1G014420 Cucumis sativus L. HOM05D006704 ORTHO05D008635 5.4e-106 388.3 312 60.3
CSS0007169 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.2e-105 387.1 309 62.1
CSS0018673 Camellia sinensis var. sinensis HOM05D006704 ORTHO05D008635 1.2e-105 387.1 309 62.1
Aa31LG5G8320 Aethionema arabicum HOM05D006704 ORTHO05D008635 2.7e-105 386.0 301 60.8
Hund20877 Selenicereus undatus HOM05D006704 ORTHO05D008635 2.7e-105 386.0 308 61.7
Migut.D02353 Erythranthe guttata HOM05D006704 ORTHO05D008635 3.5e-105 385.6 306 60.1
Lalb_Chr03g0028021 Lupinus albus HOM05D006704 ORTHO05D008635 4.6e-105 385.2 311 60.1
ClCG01G012900 Citrullus lanatus HOM05D006704 ORTHO05D008635 6.0e-105 384.8 312 60.6
EL10Ac7g15806 Beta vulgaris HOM05D006704 ORTHO05D008635 7.9e-105 384.4 309 60.5
Rhsim13G0110100 Rhododendron simsii HOM05D006704 ORTHO05D008635 1.0e-104 384.0 311 61.1
CANSAT54G0988 Cannabis sativa HOM05D006704 ORTHO05D008635 1.3e-104 383.6 306 61.1
Ah.08g215840 Amaranthus hybridus HOM05D006704 ORTHO05D008635 1.7e-104 383.3 312 59.9
AUR62039223 Chenopodium quinoa HOM05D006704 ORTHO05D008635 2.3e-104 382.9 309 59.9
VMungo1127G0699 Vigna mungo HOM05D006704 ORTHO05D008635 3.9e-104 382.1 311 60.8
Peaxi162Scf00091g00118 Petunia axillaris HOM05D006704 ORTHO05D008635 5.1e-104 381.7 288 64.2
Eucgr.I00893 Eucalyptus grandis HOM05D006704 ORTHO05D008635 1.1e-103 380.6 312 60.3
AUR62009778 Chenopodium quinoa HOM05D006704 ORTHO05D008635 3.3e-103 379.0 309 59.2
Thhalv10016700m.g Eutrema salsugineum HOM05D006704 ORTHO05D008635 3.3e-103 379.0 302 60.6
CARHR121470 Cardamine hirsuta HOM05D006704 ORTHO05D008635 7.4e-103 377.9 303 60.7
MSTRG.18751 Avicennia marina HOM05D006704 ORTHO05D008635 1.3e-102 377.1 313 59.1
SEGI_32150 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 1.3e-102 377.1 317 57.7
Carub.0004s0825 Capsella rubella HOM05D006704 ORTHO05D008635 1.6e-102 376.7 298 60.4
AL4G22810 Arabidopsis lyrata HOM05D006704 ORTHO05D008635 4.8e-102 375.2 307 59.6
Phvul.011G092800 Phaseolus vulgaris HOM05D006704 ORTHO05D008635 1.4e-101 373.6 310 59.7
AT2G27590 Arabidopsis thaliana HOM05D006704 ORTHO05D008635 3.1e-101 372.5 304 59.5
BolC4t27219H Brassica oleracea HOM05D006704 ORTHO05D008635 3.4e-100 369.0 298 59.1
A04p21040 Brassica napus HOM05D006704 ORTHO05D008635 5.8e-100 368.2 298 59.1
BraA04t17672Z Brassica rapa HOM05D006704 ORTHO05D008635 5.8e-100 368.2 298 59.1
BcaC02g08239 Brassica carinata HOM05D006704 ORTHO05D008635 7.6e-100 367.9 298 59.1
C04p56860 Brassica napus HOM05D006704 ORTHO05D008635 7.6e-100 367.9 298 59.1
Sp4g10410 Schrenkiella parvula HOM05D006704 ORTHO05D008635 7.6e-100 367.9 299 58.5
BcaB06g28156 Brassica carinata HOM05D006704 ORTHO05D008635 2.2e-99 366.3 302 58.6
CiPaw.13G137600 Carya illinoinensis HOM05D006704 ORTHO05D008635 3.2e-98 362.5 302 60.6
Sc12g0004410 Simmondsia chinensis HOM05D006704 ORTHO05D008635 1.2e-97 360.5 290 59.7
unitig_37.g12893 Utricularia gibba HOM05D006704 ORTHO05D008635 2.7e-97 359.4 301 57.8
Lj2A980T13 Lonicera japonica HOM05D006704 ORTHO05D008635 1.6e-94 350.1 309 56.3
AagrBONN_evm.TU.Sc2ySwM_228.5549 Anthoceros agrestis HOM05D006704 ORTHO05D008635 1.2e-92 344.0 306 55.2
Haze_23402 Corylus avellana HOM05D006704 ORTHO05D008635 1.5e-92 343.6 420 46.2
Mapoly0047s0027 Marchantia polymorpha HOM05D006704 ORTHO05D008635 4.5e-92 342.0 314 54.1
SMO079G0003 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 1.9e-90 336.7 301 53.8
SMO200G0095 Selaginella moellendorffii HOM05D006704 ORTHO05D008635 3.2e-90 335.9 301 53.5
Prupe.6G127300 Prunus persica HOM05D006704 ORTHO05D008635 2.3e-88 329.7 275 58.5
Cpa.g.sc32.105 Carica papaya HOM05D006704 ORTHO05D008635 9.3e-82 307.8 247 61.5
Actinidia07237 Actinidia chinensis HOM05D006704 ORTHO05D008635 3.6e-73 279.3 315 49.2
FAN16G1713 Fragaria x ananassa HOM05D006704 ORTHO05D008635 7.9e-73 278.1 246 57.3
Hma1.2p1_0305F.1_g119660 Hydrangea macrophylla HOM05D006704 ORTHO05D008635 1.4e-66 257.3 206 62.1
MD03G1142200 Malus domestica HOM05D006704 ORTHO05D008635 7.5e-31 138.7 93 66.7
TWI79G0085 Tripterygium wilfordii HOM05D006704 ORTHO05D008635 2.0e-28 130.6 117 53.8
VMungo0464G0466 Vigna mungo HOM05D006704 ORTHO05D000044 1.5e-23 114.4 67 71.6
Oeu031485.1 Olea europaea HOM05D006704 ORTHO05D008635 5.0e-19 99.4 297 29.0
Cpa.g.sc32.104 Carica papaya HOM05D006704 ORTHO05D008635 5.8e-15 85.9 76 55.3
Migut.D01870 Erythranthe guttata HOM05D006704 ORTHO05D008635 2.2e-14 84.0 72 56.9
Actinidia24205 Actinidia chinensis HOM05D006704 ORTHO05D008635 4.1e-13 79.7 64 59.4
SEGI_14445 Sequoiadendron giganteum HOM05D006704 ORTHO05D008635 8.6e-11 72.0 38 78.9
Cfa010043 Carpinus fangiana HOM05D006704 ORTHO05D008635 1.5e-10 71.2 37 81.1
QL02p006829 Quercus lobata HOM05D006704 ORTHO05D004198 1.6e-09 67.8 48 66.7
PSO541G0451 Papaver somniferum HOM05D006704 ORTHO05D305146 6.4e-06 55.8 46 50.0


User provided reference genes

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