Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0820G128 Amborella trichopoda HOM05D006357 ORTHO05D007925 2.7e-51 205.7 160 100.0
ATR0820G202 Amborella trichopoda HOM05D006357 ORTHO05D007925 1.9e-33 146.4 159 69.8
ATR0820G064 Amborella trichopoda HOM05D006357 ORTHO05D007925 3.8e-29 132.1 160 57.5
Aqoxy4G02740 Aquilegia oxysepala HOM05D006357 ORTHO05D007925 1.7e-21 106.7 93 63.4
Aqoxy2G01095 Aquilegia oxysepala HOM05D006357 ORTHO05D007925 2.9e-21 105.9 93 53.8
TAR633G1946 Trochodendron aralioides HOM05D006357 ORTHO05D007925 2.9e-21 105.9 93 57.0
PSO801G0234 Papaver somniferum HOM05D006357 ORTHO05D007925 5.5e-20 101.7 93 54.8
PGR119G0351 Punica granatum HOM05D006357 ORTHO05D007925 7.1e-20 101.3 93 55.9
ClCG02G022220 Citrullus lanatus HOM05D006357 ORTHO05D007925 1.6e-19 100.1 93 57.0
Manes.11G162800 Manihot esculenta HOM05D006357 ORTHO05D007925 1.6e-19 100.1 93 52.7
Rhsim01G0204700 Rhododendron simsii HOM05D006357 ORTHO05D007925 1.6e-19 100.1 93 54.8
Eucgr.J00502 Eucalyptus grandis HOM05D006357 ORTHO05D007925 2.1e-19 99.8 84 63.1
PSO339G3266 Papaver somniferum HOM05D006357 ORTHO05D007925 2.1e-19 99.8 93 53.8
Aa31LG4G13870 Aethionema arabicum HOM05D004825 ORTHO05D005415 2.7e-19 99.4 93 53.8
MBI01_g14623_MAGBIO Magnolia biondii HOM05D006357 ORTHO05D007925 2.7e-19 99.4 93 51.6
Duzib150G0376 Durio zibethinus HOM05D006357 ORTHO05D007925 3.5e-19 99.0 93 52.7
Gohir.D07G114400 Gossypium hirsutum HOM05D006357 ORTHO05D007925 3.5e-19 99.0 93 52.7
Atru.chr3.3206 Acer truncatum HOM05D006357 ORTHO05D007925 4.6e-19 98.6 84 58.3
Atru.chr3.3208 Acer truncatum HOM05D006357 ORTHO05D007925 4.6e-19 98.6 84 58.3
A06p22010 Brassica napus HOM05D006357 ORTHO05D007925 4.6e-19 98.6 93 53.8
BraA06t25289Z Brassica rapa HOM05D006357 ORTHO05D007925 4.6e-19 98.6 93 53.8
MELO3C014499.2 Cucumis melo HOM05D006357 ORTHO05D007925 4.6e-19 98.6 93 55.9
Gorai.001G122700 Gossypium raimondii HOM05D006357 ORTHO05D007925 4.6e-19 98.6 93 52.7
QL01p012073 Quercus lobata HOM05D006357 ORTHO05D007925 4.6e-19 98.6 84 59.5
Sc06g0008780 Simmondsia chinensis HOM05D006357 ORTHO05D007925 6.0e-19 98.2 83 53.0
Gohir.A07G110700 Gossypium hirsutum HOM05D006357 ORTHO05D007925 7.9e-19 97.8 93 51.6
CsaV3_6G038350 Cucumis sativus L. HOM05D006357 ORTHO05D007925 1.0e-18 97.4 93 54.8
Nn6g34850 Nelumbo nucifera HOM05D006357 ORTHO05D007925 1.0e-18 97.4 92 52.2
Prupe.6G132600 Prunus persica HOM05D006357 ORTHO05D007925 1.0e-18 97.4 93 54.8
SalBow3G2384 Salvia bowleyana HOM05D006357 ORTHO05D007925 1.0e-18 97.4 93 55.9
Sp5g16810 Schrenkiella parvula HOM05D006357 ORTHO05D007925 1.0e-18 97.4 93 53.8
CiPaw.13G134700 Carya illinoinensis HOM05D006357 ORTHO05D007925 1.3e-18 97.1 84 57.1
Thecc.09G281200 Theobroma cacao HOM05D006357 ORTHO05D007925 1.8e-18 96.7 93 51.6
CSS0003287 Camellia sinensis var. sinensis HOM05D006357 ORTHO05D007925 2.3e-18 96.3 93 53.8
Haze_23361 Corylus avellana HOM05D006357 ORTHO05D007925 2.3e-18 96.3 84 59.5
Gohir.D08G016000 Gossypium hirsutum HOM05D006357 ORTHO05D007925 2.3e-18 96.3 93 52.7
Gorai.004G010300 Gossypium raimondii HOM05D006357 ORTHO05D007925 2.3e-18 96.3 93 52.7
VMungo1127G1055 Vigna mungo HOM05D006357 ORTHO05D007925 2.3e-18 96.3 84 57.1
BcaB01g01165 Brassica carinata HOM05D006357 ORTHO05D007925 3.0e-18 95.9 93 53.8
BcaC01g02047 Brassica carinata HOM05D006357 ORTHO05D007925 3.9e-18 95.5 84 58.3
C03p69190 Brassica napus HOM05D006357 ORTHO05D007925 3.9e-18 95.5 84 58.3
BolC3t19173H Brassica oleracea HOM05D006357 ORTHO05D007925 3.9e-18 95.5 84 58.3
CARHR104480 Cardamine hirsuta HOM05D006357 ORTHO05D007925 3.9e-18 95.5 93 52.7
FvH4_3g25160 Fragaria vesca HOM05D006357 ORTHO05D007925 3.9e-18 95.5 93 52.7
FAN11G2870 Fragaria x ananassa HOM05D006357 ORTHO05D007925 3.9e-18 95.5 93 52.7
Glyma.11G182400 Glycine max HOM05D006357 ORTHO05D007925 3.9e-18 95.5 84 57.1
Gohir.A08G005700 Gossypium hirsutum HOM05D006357 ORTHO05D007925 3.9e-18 95.5 93 52.7
MD03G1147800 Malus domestica HOM05D006357 ORTHO05D007925 3.9e-18 95.5 93 50.5
QL01p012091 Quercus lobata HOM05D006357 ORTHO05D007925 3.9e-18 95.5 84 57.1
THA.LOC104814785 Tarenaya hassleriana HOM05D006357 ORTHO05D007925 3.9e-18 95.5 84 60.7
GSVIVG01036107001 Vitis vinifera HOM05D006357 ORTHO05D007925 3.9e-18 95.5 94 54.3
EL10Ac7g15835 Beta vulgaris HOM05D006357 ORTHO05D007925 5.1e-18 95.1 93 52.7
Cfa010003 Carpinus fangiana HOM05D006357 ORTHO05D007925 5.1e-18 95.1 84 59.5
AL5G22540 Arabidopsis lyrata HOM05D006357 ORTHO05D007925 6.7e-18 94.7 93 51.6
AT3G44380 Arabidopsis thaliana HOM05D006357 ORTHO05D007925 8.7e-18 94.4 93 52.7
FvH4_3g25140 Fragaria vesca HOM05D006357 ORTHO05D007925 8.7e-18 94.4 84 58.3
FAN25G2095 Fragaria x ananassa HOM05D006357 ORTHO05D007925 8.7e-18 94.4 84 57.1
Prupe.6G132700 Prunus persica HOM05D006357 ORTHO05D007925 1.1e-17 94.0 93 49.5
Os08g0558300 Oryza sativa ssp. japonica HOM05D006357 ORTHO05D007925 1.5e-17 93.6 92 50.0
FAN21G3578 Fragaria x ananassa HOM05D006357 ORTHO05D007925 1.9e-17 93.2 84 57.1
TWI79G0514 Tripterygium wilfordii HOM05D006357 ORTHO05D007925 1.9e-17 93.2 93 50.5
Carub.0005s1011 Capsella rubella HOM05D006357 ORTHO05D007925 2.5e-17 92.8 93 50.5
Phvul.011G095000 Phaseolus vulgaris HOM05D006357 ORTHO05D007925 2.5e-17 92.8 84 54.8
RcHm_v2.0_Chr5g0046241 Rosa chinensis HOM05D006357 ORTHO05D007925 2.5e-17 92.8 84 54.8
Thhalv10010749m.g Eutrema salsugineum HOM05D006357 ORTHO05D007925 4.3e-17 92.0 93 50.5
MD11G1166600 Malus domestica HOM05D006357 ORTHO05D007925 4.3e-17 92.0 93 51.6
arahy.Tifrunner.gnm1.ann1.5186VC Arachis hypogaea HOM05D006357 ORTHO05D007925 5.6e-17 91.7 84 58.3
CANSAT54G2809 Cannabis sativa HOM05D006357 ORTHO05D007925 5.6e-17 91.7 93 50.5
Dinv22833 Davidia involucrata HOM05D006357 ORTHO05D007925 5.6e-17 91.7 93 49.5
arahy.Tifrunner.gnm1.ann1.JXBE2X Arachis hypogaea HOM05D006357 ORTHO05D007925 7.4e-17 91.3 84 58.3
Ca_19414_v3 Cicer arietinum L. HOM05D006357 ORTHO05D007925 7.4e-17 91.3 84 54.8
Lj2P966T16 Lonicera japonica HOM05D006357 ORTHO05D007925 7.4e-17 91.3 84 54.8
SGA_v2.0_scaffold177G39425 Striga asiatica HOM05D006357 ORTHO05D007925 7.4e-17 91.3 84 54.8
AUR62009745 Chenopodium quinoa HOM05D006357 ORTHO05D007925 9.6e-17 90.9 93 49.5
Sc21g0007020 Simmondsia chinensis HOM05D006357 ORTHO05D007925 9.6e-17 90.9 84 53.6
MSTRG.12374 Avicennia marina HOM05D006357 ORTHO05D007925 1.3e-16 90.5 83 55.4
Cc01_g08980 Coffea canephora HOM05D006357 ORTHO05D007925 1.3e-16 90.5 84 57.1
Medtr4g052840 Medicago truncatula HOM05D006357 ORTHO05D007925 1.3e-16 90.5 84 54.8
Sabra16G0125700 Salix brachista HOM05D006357 ORTHO05D007925 1.3e-16 90.5 94 52.1
Ciclev10029363m.g Citrus clementina HOM05D006357 ORTHO05D007925 1.6e-16 90.1 92 50.0
TPR.G17225 Trifolium pratense HOM05D006357 ORTHO05D007925 1.6e-16 90.1 95 48.4
TWI75G1708 Tripterygium wilfordii HOM05D006357 ORTHO05D007925 1.6e-16 90.1 83 54.2
AUR62036192 Chenopodium quinoa HOM05D006357 ORTHO05D007925 2.1e-16 89.7 93 48.4
Lalb_Chr01g0004891 Lupinus albus HOM05D006357 ORTHO05D007925 2.1e-16 89.7 93 47.3
AUR62036201 Chenopodium quinoa HOM05D006357 ORTHO05D007925 2.8e-16 89.4 90 52.2
Ca_26666_v3 Cicer arietinum L. HOM05D006357 ORTHO05D007925 2.8e-16 89.4 84 53.6
Migut.N02483 Erythranthe guttata HOM05D006357 ORTHO05D007925 2.8e-16 89.4 93 51.6
Lalb_Chr03g0028161 Lupinus albus HOM05D006357 ORTHO05D007925 2.8e-16 89.4 93 49.5
Actinidia37077 Actinidia chinensis HOM05D006357 ORTHO05D007925 3.7e-16 89.0 84 56.0
Ah.15g095880 Amaranthus hybridus HOM05D006357 ORTHO05D007925 3.7e-16 89.0 93 49.5
Pp3c2_16750 Physcomitrium patens HOM05D006357 ORTHO05D007925 3.7e-16 89.0 81 55.6
unitig_699.g19178 Utricularia gibba HOM05D006357 ORTHO05D007925 3.7e-16 89.0 92 52.2
Psat7g187640 Pisum sativum HOM05D006357 ORTHO05D007925 4.8e-16 88.6 84 53.6
PGR102G0344 Punica granatum HOM05D006357 ORTHO05D007925 4.8e-16 88.6 93 47.3
Sed0020794 Sechium edule HOM05D006357 ORTHO05D007925 4.8e-16 88.6 93 51.6
SMO347G0335 Selaginella moellendorffii HOM05D006357 ORTHO05D007925 4.8e-16 88.6 93 48.4
Potri.001G218400 Populus trichocarpa HOM05D006357 ORTHO05D007925 1.1e-15 87.4 94 50.0
SEGI_40876 Sequoiadendron giganteum HOM05D006357 ORTHO05D007925 1.1e-15 87.4 95 48.4
Solyc11g068550.1 Solanum lycopersicum HOM05D006357 ORTHO05D007925 1.8e-15 86.7 84 53.6
Sopen11g027270 Solanum pennellii HOM05D006357 ORTHO05D007925 1.8e-15 86.7 84 53.6
HanXRQChr01g0024501 Helianthus annuus HOM05D006357 ORTHO05D007925 2.4e-15 86.3 93 49.5
Lsat_1_v5_gn_1_59200 Lactuca sativa HOM05D006357 ORTHO05D007925 2.4e-15 86.3 83 53.0
Ah.08g215640 Amaranthus hybridus HOM05D006357 ORTHO05D007925 3.1e-15 85.9 84 54.8
Nitab4.5_0006120g0030 Nicotiana tabacum HOM05D006357 ORTHO05D007925 3.1e-15 85.9 84 52.4
Nitab4.5_0005641g0010 Nicotiana tabacum HOM05D006357 ORTHO05D007925 4.0e-15 85.5 84 52.4
Lj3g0017887 Lotus japonicus HOM05D006357 ORTHO05D007925 5.3e-15 85.1 93 48.4
DCAR_006168 Daucus carota HOM05D006357 ORTHO05D007925 6.9e-15 84.7 90 47.8
ECA248G3754 Erigeron canadensis HOM05D006357 ORTHO05D007925 6.9e-15 84.7 79 54.4
Mapoly0079s0020 Marchantia polymorpha HOM05D006357 ORTHO05D007925 9.0e-15 84.3 93 46.2
AagrBONN_evm.TU.Sc2ySwM_117.3687 Anthoceros agrestis HOM05D006357 ORTHO05D007925 2.6e-14 82.8 92 45.7
Dinv42541 Davidia involucrata HOM05D006357 ORTHO05D007925 5.8e-14 81.6 93 47.3
Pp3c21_10640 Physcomitrium patens HOM05D006357 ORTHO05D007925 7.6e-14 81.3 81 49.4
Nn6g34849 Nelumbo nucifera HOM05D006357 ORTHO05D007925 3.8e-13 79.0 92 46.7
Hma1.2p1_0587F.1_g184180 Hydrangea macrophylla HOM05D006357 ORTHO05D007925 1.1e-12 77.4 84 47.6
AUR62044742 Chenopodium quinoa HOM05D006357 ORTHO05D007925 5.5e-12 75.1 71 56.3
RcHm_v2.0_Chr5g0046191 Rosa chinensis HOM05D006357 ORTHO05D007925 2.7e-11 72.8 56 58.9
Pp3c9_9450 Physcomitrium patens HOM05D006357 ORTHO05D007925 3.5e-11 72.4 92 40.2
PGSC0003DMG400026335 Solanum tuberosum HOM05D006357 ORTHO05D007925 6.1e-11 71.6 70 54.3
PSO384G0917 Papaver somniferum HOM05D006357 ORTHO05D007925 1.3e-10 70.5 98 42.9
PSO339G1489 Papaver somniferum HOM05D006357 ORTHO05D007925 6.7e-10 68.2 98 41.8
Actinidia35469 Actinidia chinensis HOM05D006357 ORTHO05D007925 1.5e-09 67.0 56 62.5
AUR62036200 Chenopodium quinoa HOM05D006357 ORTHO05D007925 3.1e-07 59.3 66 47.0
Cpa.g.sc195.8 Carica papaya HOM05D006357 ORTHO05D007925 3.4e-06 55.8 44 56.8


User provided reference genes

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