Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0820G116 Amborella trichopoda HOM05D005512 ORTHO05D006716 4.3e-116 421.4 219 100.0
Nn2g14077 Nelumbo nucifera HOM05D005512 ORTHO05D006716 7.7e-25 118.2 189 47.1
Nn6g34983 Nelumbo nucifera HOM05D005512 ORTHO05D006716 1.3e-24 117.5 169 50.9
TAR623G0330 Trochodendron aralioides HOM05D005512 ORTHO05D006716 5.5e-23 112.1 207 43.0
TWI53G0330 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 2.8e-19 99.8 198 42.4
Aqoxy4G02826 Aquilegia oxysepala HOM05D005512 ORTHO05D006716 3.7e-19 99.4 164 45.7
GSVIVG01033811001 Vitis vinifera HOM05D005512 ORTHO05D006716 1.7e-16 90.5 190 41.1
TWI74G0342 Tripterygium wilfordii HOM05D005512 ORTHO05D006716 1.1e-15 87.8 192 39.6
Atru.chr8.1592 Acer truncatum HOM05D005512 ORTHO05D006716 2.8e-14 83.2 196 37.8
Dinv31662 Davidia involucrata HOM05D005512 ORTHO05D006716 6.1e-14 82.0 188 38.8
Dinv21230 Davidia involucrata HOM05D005512 ORTHO05D006716 1.0e-13 81.3 215 37.2
Haze_19571 Corylus avellana HOM05D005512 ORTHO05D006716 1.4e-13 80.9 191 37.2
Cfa016575 Carpinus fangiana HOM05D005512 ORTHO05D006716 2.3e-13 80.1 191 36.6
QL07p039701 Quercus lobata HOM05D005512 ORTHO05D006716 3.0e-13 79.7 176 38.6
PSO384G3501 Papaver somniferum HOM05D005512 ORTHO05D006716 4.0e-13 79.3 202 41.1
Prupe.7G114400 Prunus persica HOM05D005512 ORTHO05D006716 1.2e-12 77.8 170 37.6
MD12G1022300 Malus domestica HOM05D005512 ORTHO05D006716 2.6e-12 76.6 180 37.2
FvH4_6g18250 Fragaria vesca HOM05D005512 ORTHO05D006716 7.5e-12 75.1 174 38.5
FAN09G0635 Fragaria x ananassa HOM05D005512 ORTHO05D006716 9.8e-12 74.7 174 38.5
RcHm_v2.0_Chr3g0472661 Rosa chinensis HOM05D005512 ORTHO05D006716 1.3e-11 74.3 179 36.9
FAN02G2015 Fragaria x ananassa HOM05D005512 ORTHO05D006716 1.7e-11 73.9 184 37.0
FAN05G0202 Fragaria x ananassa HOM05D005512 ORTHO05D006716 4.9e-11 72.4 206 36.4
Carub.0001s1906 Capsella rubella HOM05D005512 ORTHO05D006716 6.3e-11 72.0 156 35.9
CARHR020060 Cardamine hirsuta HOM05D005512 ORTHO05D006716 6.3e-11 72.0 160 37.5
Thhalv10009681m.g Eutrema salsugineum HOM05D005512 ORTHO05D006716 6.3e-11 72.0 161 36.0
FAN05G5667 Fragaria x ananassa HOM05D005512 ORTHO05D006716 6.3e-11 72.0 206 36.4
FAN14G2179 Fragaria x ananassa HOM05D005512 ORTHO05D006716 6.3e-11 72.0 171 39.2
Eucgr.K02061 Eucalyptus grandis HOM05D005512 ORTHO05D006716 3.1e-10 69.7 172 36.6
FAN14G2174 Fragaria x ananassa HOM05D005512 ORTHO05D006716 3.1e-10 69.7 200 37.0
Sp1g17370 Schrenkiella parvula HOM05D005512 ORTHO05D006716 4.1e-10 69.3 218 33.5
CDE08G0293 Ceratophyllum demersum HOM05D005512 ORTHO05D006716 7.0e-10 68.6 199 33.2
AT1G19490 Arabidopsis thaliana HOM05D005512 ORTHO05D006716 9.2e-10 68.2 162 36.4
BcaB03g14441 Brassica carinata HOM05D005512 ORTHO05D006716 1.2e-09 67.8 171 35.7
PGR142G2241 Punica granatum HOM05D005512 ORTHO05D006716 1.2e-09 67.8 189 33.9
Ciclev10013541m.g Citrus clementina HOM05D005512 ORTHO05D006716 1.6e-09 67.4 192 34.4
A06p15670 Brassica napus HOM05D005512 ORTHO05D006716 2.0e-09 67.0 175 35.4
BraA06t24676Z Brassica rapa HOM05D005512 ORTHO05D006716 2.0e-09 67.0 175 35.4
CANSAT80G2511 Cannabis sativa HOM05D005512 ORTHO05D006716 2.0e-09 67.0 176 37.5
AL1G32240 Arabidopsis lyrata HOM05D005512 ORTHO05D006716 4.5e-09 65.9 156 36.5
Cpa.g.sc5.51 Carica papaya HOM05D005512 ORTHO05D006716 4.5e-09 65.9 189 34.9
CsaV3_3G037090 Cucumis sativus L. HOM05D005512 ORTHO05D006716 4.5e-09 65.9 170 37.1
MELO3C009455.2 Cucumis melo HOM05D005512 ORTHO05D006716 5.9e-09 65.5 170 35.9
Gohir.A04G064600 Gossypium hirsutum HOM05D005512 ORTHO05D006716 5.9e-09 65.5 67 59.7
THA.LOC104804992 Tarenaya hassleriana HOM05D005512 ORTHO05D006716 1.3e-08 64.3 224 33.9
C05p17910 Brassica napus HOM05D005512 ORTHO05D006716 2.3e-08 63.5 175 36.6
Gohir.D04G102100 Gossypium hirsutum HOM05D005512 ORTHO05D006716 2.3e-08 63.5 67 58.2
Gorai.009G405400 Gossypium raimondii HOM05D005512 ORTHO05D006716 2.3e-08 63.5 67 58.2
Lj3A1000G63 Lonicera japonica HOM05D005512 ORTHO05D006716 3.8e-08 62.8 170 36.5
Potri.006G114600 Populus trichocarpa HOM05D005512 ORTHO05D006716 5.0e-08 62.4 170 34.7
Thecc.05G085400 Theobroma cacao HOM05D005512 ORTHO05D006716 6.6e-08 62.0 79 49.4
ClCG10G019160 Citrullus lanatus HOM05D005512 ORTHO05D006716 1.1e-07 61.2 171 36.3
Sabra06G0089500 Salix brachista HOM05D005512 ORTHO05D006716 1.1e-07 61.2 159 35.2
MBI17_g31309_MAGBIO Magnolia biondii HOM05D005512 ORTHO05D006716 1.9e-07 60.5 197 33.0
Pp3c17_11650 Physcomitrium patens HOM05D005512 ORTHO05D006716 3.3e-07 59.7 102 45.1
Duzib093G0027 Durio zibethinus HOM05D005512 ORTHO05D006716 4.3e-07 59.3 84 45.2
CiPaw.09G010900 Carya illinoinensis HOM05D005512 ORTHO05D006716 9.5e-07 58.2 172 36.0
CiPaw.10G007200 Carya illinoinensis HOM05D005512 ORTHO05D006716 1.2e-06 57.8 230 31.3
Pp3c14_6250 Physcomitrium patens HOM05D005512 ORTHO05D006716 1.2e-06 57.8 66 60.6
Hma1.2p1_0084F.1_g043460 Hydrangea macrophylla HOM05D005512 ORTHO05D006716 2.1e-06 57.0 202 34.2
AagrBONN_evm.TU.Sc2ySwM_117.2312 Anthoceros agrestis HOM05D005512 ORTHO05D006716 3.6e-06 56.2 124 37.1
Sed0026834 Sechium edule HOM05D005512 ORTHO05D006716 4.7e-06 55.8 201 32.8
MD14G1019200 Malus domestica HOM05D005512 ORTHO05D006716 6.1e-06 55.5 218 29.4
Aa31LG7G4150 Aethionema arabicum HOM05D005512 ORTHO05D006716 8.0e-06 55.1 189 32.8
arahy.Tifrunner.gnm1.ann1.EPRD9B Arachis hypogaea HOM05D005512 ORTHO05D006716 8.0e-06 55.1 200 32.0
Manes.09G059527 Manihot esculenta HOM05D005512 ORTHO05D006716 8.0e-06 55.1 164 34.1


User provided reference genes

Program Settings