Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0820G103 Amborella trichopoda HOM05D007000 ORTHO05D009020 0.0e+00 1503.8 811 100.0
QL01p013748 Quercus lobata HOM05D007000 ORTHO05D009020 1.6e-256 889.8 765 61.7
TAR623G0382 Trochodendron aralioides HOM05D007000 ORTHO05D009020 2.1e-253 879.4 783 61.3
CSS0049563 Camellia sinensis var. sinensis HOM05D007000 ORTHO05D009020 1.4e-252 876.7 531 75.5
Eucgr.J00424 Eucalyptus grandis HOM05D007000 ORTHO05D009020 8.9e-252 874.0 768 57.6
GSVIVG01031401001 Vitis vinifera HOM05D007000 ORTHO05D009020 4.4e-251 871.7 765 60.5
Gohir.A07G107200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 1.3e-250 870.2 812 59.9
FvH4_3g29910 Fragaria vesca HOM05D007000 ORTHO05D009020 2.2e-250 869.4 808 57.9
FAN11G3012 Fragaria x ananassa HOM05D007000 ORTHO05D009020 2.2e-250 869.4 808 57.9
Dinv12525 Davidia involucrata HOM05D007000 ORTHO05D009020 3.7e-250 868.6 706 64.0
RcHm_v2.0_Chr5g0055251 Rosa chinensis HOM05D007000 ORTHO05D009020 1.1e-249 867.1 765 59.1
FAN21G0141 Fragaria x ananassa HOM05D007000 ORTHO05D009020 1.9e-249 866.3 813 57.4
Prupe.6G118900 Prunus persica HOM05D007000 ORTHO05D009020 2.1e-248 862.8 723 60.9
MD03G1134600 Malus domestica HOM05D007000 ORTHO05D009020 3.5e-248 862.1 785 57.8
Aqoxy1G00944 Aquilegia oxysepala HOM05D007000 ORTHO05D009020 1.3e-247 860.1 785 60.4
Nn6g35052 Nelumbo nucifera HOM05D007000 ORTHO05D009020 1.7e-247 859.8 751 60.1
Gorai.001G119500 Gossypium raimondii HOM05D007000 ORTHO05D009020 3.9e-247 858.6 547 72.2
Gorai.001G119400 Gossypium raimondii HOM05D007000 ORTHO05D009020 2.8e-245 852.4 783 60.2
Sabra09G0117700 Salix brachista HOM05D007000 ORTHO05D009020 1.1e-244 850.5 777 55.1
Potri.009G149100 Populus trichocarpa HOM05D007000 ORTHO05D009020 1.4e-244 850.1 759 55.9
Gohir.D07G111200 Gossypium hirsutum HOM05D007000 ORTHO05D009020 2.3e-244 849.4 809 58.6
Gohir.A07G107100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 6.8e-244 847.8 784 59.2
Sc12g0004140 Simmondsia chinensis HOM05D007000 ORTHO05D009020 1.5e-243 846.7 533 72.8
ClCG02G021900 Citrullus lanatus HOM05D007000 ORTHO05D009020 4.4e-243 845.1 699 63.9
FAN16G1383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 4.4e-243 845.1 827 56.0
PGSC0003DMG400026534 Solanum tuberosum HOM05D007000 ORTHO05D009020 5.8e-243 844.7 716 59.9
Manes.04G009000 Manihot esculenta HOM05D007000 ORTHO05D009020 7.5e-243 844.3 752 61.7
PGR119G0747 Punica granatum HOM05D007000 ORTHO05D009020 7.5e-243 844.3 783 59.0
Migut.D02336 Erythranthe guttata HOM05D007000 ORTHO05D009020 1.7e-242 843.2 789 55.6
Solyc11g066870.3 Solanum lycopersicum HOM05D007000 ORTHO05D009020 2.9e-242 842.4 724 59.5
Sopen11g026580 Solanum pennellii HOM05D007000 ORTHO05D009020 2.9e-242 842.4 726 59.5
Nitab4.5_0001453g0060 Nicotiana tabacum HOM05D007000 ORTHO05D009020 2.7e-240 835.9 533 71.7
TWI75G0014 Tripterygium wilfordii HOM05D007000 ORTHO05D009020 3.5e-240 835.5 798 57.3
Ciclev10027793m.g Citrus clementina HOM05D007000 ORTHO05D009020 4.6e-240 835.1 771 59.4
MSTRG.18732 Avicennia marina HOM05D007000 ORTHO05D009020 1.0e-239 833.9 751 56.1
Sed0022610 Sechium edule HOM05D007000 ORTHO05D009020 1.7e-239 833.2 708 60.5
CAN.G644.32 Capsicum annuum HOM05D007000 ORTHO05D009020 3.0e-239 832.4 708 58.8
AUR62038302 Chenopodium quinoa HOM05D007000 ORTHO05D009020 5.1e-239 831.6 789 57.8
Cc01_g09830 Coffea canephora HOM05D007000 ORTHO05D009020 5.1e-239 831.6 689 63.4
AUR62023939 Chenopodium quinoa HOM05D007000 ORTHO05D009020 8.6e-239 830.9 540 70.9
Duzib150G0107 Durio zibethinus HOM05D007000 ORTHO05D009020 4.3e-238 828.6 814 56.1
CiPaw.14G103700 Carya illinoinensis HOM05D007000 ORTHO05D009020 7.3e-238 827.8 766 56.8
Oeu050179.1 Olea europaea HOM05D007000 ORTHO05D009020 1.1e-236 823.9 702 61.8
Sp6g22700 Schrenkiella parvula HOM05D007000 ORTHO05D009020 1.4e-236 823.5 767 58.3
CANSAT54G2429 Cannabis sativa HOM05D007000 ORTHO05D009020 6.8e-236 821.2 768 56.0
Aa31LG1G12980 Aethionema arabicum HOM05D007000 ORTHO05D009020 1.2e-235 820.5 737 62.0
Nitab4.5_0007303g0050 Nicotiana tabacum HOM05D007000 ORTHO05D009020 2.9e-234 815.8 572 66.8
BolC9t58265H Brassica oleracea HOM05D007000 ORTHO05D009020 7.1e-233 811.2 762 57.9
PSO063G0097 Papaver somniferum HOM05D007000 ORTHO05D009020 1.6e-232 810.1 802 59.1
C09p53930 Brassica napus HOM05D007000 ORTHO05D009020 2.1e-232 809.7 528 70.5
BraA10t43904Z Brassica rapa HOM05D007000 ORTHO05D009020 1.3e-231 807.0 755 58.1
PSO339G5428 Papaver somniferum HOM05D007000 ORTHO05D009020 1.7e-231 806.6 793 56.2
AL6G33670 Arabidopsis lyrata HOM05D007000 ORTHO05D009020 3.9e-231 805.4 768 56.0
A10p18280 Brassica napus HOM05D007000 ORTHO05D009020 3.9e-231 805.4 764 58.9
Thhalv10012645m.g Eutrema salsugineum HOM05D007000 ORTHO05D009020 8.7e-231 804.3 783 55.7
Carub.0006s2036 Capsella rubella HOM05D007000 ORTHO05D009020 1.5e-230 803.5 548 67.0
CDE02G4201 Ceratophyllum demersum HOM05D007000 ORTHO05D009020 2.1e-229 799.7 538 68.6
COL.COLO4_19295 Corchorus olitorius HOM05D007000 ORTHO05D009020 4.7e-229 798.5 537 68.7
AT5G22640 Arabidopsis thaliana HOM05D007000 ORTHO05D009020 8.1e-229 797.7 813 54.6
Ah.01g004600 Amaranthus hybridus HOM05D007000 ORTHO05D009020 7.6e-227 791.2 552 66.8
Lalb_Chr24g0395131 Lupinus albus HOM05D007000 ORTHO05D009020 8.4e-226 787.7 736 53.9
CARHR190940 Cardamine hirsuta HOM05D007000 ORTHO05D009020 2.4e-225 786.2 785 55.5
EL10Ac9g21077 Beta vulgaris HOM05D007000 ORTHO05D009020 2.1e-224 783.1 794 57.2
MELO3C021453.2 Cucumis melo HOM05D007000 ORTHO05D009020 2.7e-224 782.7 730 59.2
BcaB08g36412 Brassica carinata HOM05D007000 ORTHO05D009020 7.8e-224 781.2 741 57.1
CsaV3_6G014720 Cucumis sativus L. HOM05D007000 ORTHO05D009020 5.1e-223 778.5 707 60.4
Lj3g0010220 Lotus japonicus HOM05D007000 ORTHO05D009020 1.9e-222 776.5 524 67.6
DCAR_012163 Daucus carota HOM05D007000 ORTHO05D009020 9.6e-222 774.2 669 61.4
Glyma.12G181600 Glycine max HOM05D007000 ORTHO05D009020 2.6e-219 766.1 794 53.0
unitig_747.g21960 Utricularia gibba HOM05D007000 ORTHO05D009020 3.4e-219 765.8 746 55.0
Hund00783 Selenicereus undatus HOM05D007000 ORTHO05D009020 1.3e-218 763.8 520 67.5
Lsat_1_v5_gn_2_96400 Lactuca sativa HOM05D007000 ORTHO05D009020 4.9e-218 761.9 527 65.8
Glyma.13G319300 Glycine max HOM05D007000 ORTHO05D009020 1.4e-217 760.4 753 55.4
ECA238G2375 Erigeron canadensis HOM05D007000 ORTHO05D009020 2.4e-217 759.6 787 54.1
Phvul.005G127300 Phaseolus vulgaris HOM05D007000 ORTHO05D009020 2.5e-214 749.6 784 54.0
HanXRQChr14g0451961 Helianthus annuus HOM05D007000 ORTHO05D009020 7.4e-214 748.0 748 55.5
VMungo1080G1560 Vigna mungo HOM05D007000 ORTHO05D009020 5.3e-212 741.9 538 63.4
SGA_v2.0_scaffold193G40708 Striga asiatica HOM05D007000 ORTHO05D009020 1.5e-211 740.3 802 53.2
arahy.Tifrunner.gnm1.ann1.0Z9K9L Arachis hypogaea HOM05D007000 ORTHO05D009020 7.6e-211 738.0 530 64.2
arahy.Tifrunner.gnm1.ann1.K5NCJW Arachis hypogaea HOM05D007000 ORTHO05D009020 2.2e-210 736.5 530 64.2
FAN16G0383 Fragaria x ananassa HOM05D007000 ORTHO05D009020 3.2e-209 732.6 891 49.0
Lj1A221T47 Lonicera japonica HOM05D007000 ORTHO05D009020 7.1e-209 731.5 790 52.5
Medtr2g084835 Medicago truncatula HOM05D007000 ORTHO05D009020 8.4e-202 708.0 769 48.2
TPR.G32364 Trifolium pratense HOM05D007000 ORTHO05D009020 6.0e-200 701.8 801 50.8
Ca_01679_v3 Cicer arietinum L. HOM05D007000 ORTHO05D009020 4.3e-198 695.7 697 55.1
Psat5g254800 Pisum sativum HOM05D007000 ORTHO05D009020 1.1e-190 671.0 780 49.5
Thecc.09G291900 Theobroma cacao HOM05D007000 ORTHO05D009020 5.9e-171 605.5 617 55.1
Mapoly0021s0145 Marchantia polymorpha HOM05D007000 ORTHO05D009020 4.0e-159 566.2 539 51.9
Peaxi162Scf00789g00534 Petunia axillaris HOM05D007000 ORTHO05D009020 2.4e-156 557.0 525 54.1
Pp3c14_2260 Physcomitrium patens HOM05D007000 ORTHO05D009020 1.7e-154 550.8 459 56.6
HPP92_011511 Vanilla planifolia HOM05D007000 ORTHO05D009020 5.5e-153 545.8 321 74.8
SEGI_23936 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 6.0e-139 499.2 435 55.2
Haze_23451 Corylus avellana HOM05D007000 ORTHO05D009020 1.7e-138 497.7 389 61.2
Gohir.D07G111100 Gossypium hirsutum HOM05D007000 ORTHO05D009020 3.9e-138 496.5 326 69.6
ScUNg0001440 Simmondsia chinensis HOM05D007000 ORTHO05D009020 2.3e-127 460.7 276 74.6
Actinidia37100 Actinidia chinensis HOM05D007000 ORTHO05D009020 3.4e-126 456.8 744 38.2
Atru.chr3.3385 Acer truncatum HOM05D007000 ORTHO05D009020 2.2e-125 454.1 495 52.1
HPP92_011563 Vanilla planifolia HOM05D007000 ORTHO05D009020 2.9e-125 453.8 266 75.6
AagrBONN_evm.TU.Sc2ySwM_344.1665 Anthoceros agrestis HOM05D007000 ORTHO05D009020 6.6e-114 416.0 345 56.8
HPP92_011520 Vanilla planifolia HOM05D007000 ORTHO05D009020 2.4e-103 380.9 367 53.1
Atru.chr3.3384 Acer truncatum HOM05D007000 ORTHO05D009020 6.1e-83 313.2 196 70.9
MD11G1157100 Malus domestica HOM05D007000 ORTHO05D009020 2.2e-77 294.7 261 57.5
Peaxi162Scf00789g00535 Petunia axillaris HOM05D007000 ORTHO05D009020 2.1e-75 288.1 196 68.9
Cpa.g.sc47.64 Carica papaya HOM05D007000 ORTHO05D009020 6.7e-74 283.1 335 45.1
Oeu050178.1 Olea europaea HOM05D007000 ORTHO05D009020 8.8e-74 282.7 346 53.5
BcaC04g19594 Brassica carinata HOM05D007000 ORTHO05D009020 6.1e-59 233.4 169 63.9
Cpa.g.sc47.63 Carica papaya HOM05D007000 ORTHO05D009020 1.4e-42 179.1 120 72.5
CBR_g22485 Chara braunii HOM05D000019 ORTHO05D000048 2.8e-35 154.8 380 31.8
Actinidia35447 Actinidia chinensis HOM05D007000 ORTHO05D009020 5.6e-28 130.6 83 73.5
TWI75G1888 Tripterygium wilfordii HOM05D007893 ORTHO05D010042 2.1e-27 128.6 109 56.9
HPP92_011562 Vanilla planifolia HOM05D007000 ORTHO05D009020 6.6e-21 107.1 124 44.4
Aqoxy5G03114 Aquilegia oxysepala HOM05D003707 ORTHO05D004309 3.1e-18 98.2 77 62.3
SEGI_03022 Sequoiadendron giganteum HOM05D007000 ORTHO05D009020 2.1e-14 85.5 72 47.2
ECA247G2464 Erigeron canadensis HOM05D011992 ORTHO05D008321 1.6e-06 59.3 110 33.6


User provided reference genes

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