Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0820G083 Amborella trichopoda HOM05D007994 ORTHO05D010092 7.6e-65 250.4 128 100.0
Migut.N02511 Erythranthe guttata HOM05D007994 ORTHO05D010092 2.1e-14 82.8 56 57.1
MD03G1135900 Malus domestica HOM05D007994 ORTHO05D010092 8.0e-14 80.9 61 54.1
Aqoxy4G02880 Aquilegia oxysepala HOM05D007994 ORTHO05D010092 1.8e-13 79.7 51 54.9
PSO339G3278 Papaver somniferum HOM05D007994 ORTHO05D010092 1.8e-13 79.7 42 66.7
QL01p013577 Quercus lobata HOM05D007994 ORTHO05D010092 1.8e-13 79.7 45 64.4
Nn2g14036 Nelumbo nucifera HOM05D007994 ORTHO05D010092 2.3e-13 79.3 57 50.9
Cfa010076 Carpinus fangiana HOM05D007994 ORTHO05D010092 8.8e-13 77.4 45 62.2
CiPaw.13G140400 Carya illinoinensis HOM05D007994 ORTHO05D010092 2.0e-12 76.3 72 45.8
Eucgr.J00433 Eucalyptus grandis HOM05D007994 ORTHO05D010092 2.6e-12 75.9 96 39.6
MSTRG.12356 Avicennia marina HOM05D007994 ORTHO05D010092 3.4e-12 75.5 61 50.8
Dinv12515 Davidia involucrata HOM05D007994 ORTHO05D010092 3.4e-12 75.5 45 57.8
CANSAT54G1189 Cannabis sativa HOM05D007994 ORTHO05D010092 5.7e-12 74.7 57 47.4
vmacro14359 Vaccinium macrocarpon HOM05D007994 ORTHO05D010092 5.7e-12 74.7 128 35.2
Potri.009G148200 Populus trichocarpa HOM05D007994 ORTHO05D010092 7.5e-12 74.3 57 47.4
TAR623G0693 Trochodendron aralioides HOM05D007994 ORTHO05D010092 7.5e-12 74.3 102 38.2
MELO3C004786.2 Cucumis melo HOM05D007994 ORTHO05D010092 1.3e-11 73.6 57 47.4
Prupe.6G120200 Prunus persica HOM05D007994 ORTHO05D010092 1.3e-11 73.6 62 45.2
THA.LOC104814803 Tarenaya hassleriana HOM05D007994 ORTHO05D010092 1.7e-11 73.2 60 50.0
TWI75G1300 Tripterygium wilfordii HOM05D007994 ORTHO05D010092 1.7e-11 73.2 61 45.9
Sabra09G0116600 Salix brachista HOM05D007994 ORTHO05D010092 2.2e-11 72.8 57 45.6
Manes.11G158100 Manihot esculenta HOM05D007994 ORTHO05D010092 2.8e-11 72.4 44 56.8
ClCG01G012620 Citrullus lanatus HOM05D007994 ORTHO05D010092 3.7e-11 72.0 57 47.4
Duzib168G2077 Durio zibethinus HOM05D007994 ORTHO05D010092 3.7e-11 72.0 43 55.8
Gohir.D09G093400 Gossypium hirsutum HOM05D007994 ORTHO05D010092 4.8e-11 71.6 43 55.8
GSVIVG01031390001 Vitis vinifera HOM05D007994 ORTHO05D010092 4.8e-11 71.6 49 51.0
COL.COLO4_19306 Corchorus olitorius HOM05D007994 ORTHO05D010092 6.3e-11 71.2 61 45.9
Ciclev10029500m.g Citrus clementina HOM05D007994 ORTHO05D010092 1.1e-10 70.5 38 63.2
Gohir.A09G093700 Gossypium hirsutum HOM05D007994 ORTHO05D010092 1.1e-10 70.5 43 55.8
Gorai.006G110000 Gossypium raimondii HOM05D007994 ORTHO05D010092 1.1e-10 70.5 43 55.8
Actinidia35451 Actinidia chinensis HOM05D000078 ORTHO05D010092 1.4e-10 70.1 63 44.4
CsaV3_1G014550 Cucumis sativus L. HOM05D007994 ORTHO05D010092 1.4e-10 70.1 57 45.6
Oeu058281.1 Olea europaea HOM05D007994 ORTHO05D010092 1.4e-10 70.1 103 37.9
PGR119G1356 Punica granatum HOM05D007994 ORTHO05D010092 1.4e-10 70.1 40 55.0
Thecc.09G290600 Theobroma cacao HOM05D007994 ORTHO05D010092 1.4e-10 70.1 56 44.6
TPR.G15591 Trifolium pratense HOM05D007994 ORTHO05D010092 1.8e-10 69.7 66 43.9
Duzib170G0069 Durio zibethinus HOM05D007994 ORTHO05D010092 2.4e-10 69.3 38 60.5
Haze_23442 Corylus avellana HOM05D007994 ORTHO05D010092 3.1e-10 68.9 34 67.6
Cc01_g09740 Coffea canephora HOM05D007994 ORTHO05D010092 4.1e-10 68.6 57 43.9
PSO384G4503 Papaver somniferum HOM05D007994 ORTHO05D010092 4.1e-10 68.6 32 71.9
Atru.chr3.3364 Acer truncatum HOM05D007994 ORTHO05D010092 7.0e-10 67.8 48 50.0
RcHm_v2.0_Chr5g0054991 Rosa chinensis HOM05D007994 ORTHO05D010092 7.0e-10 67.8 53 47.2
Sed0020093 Sechium edule HOM05D007994 ORTHO05D010092 7.0e-10 67.8 45 53.3
PGSC0003DMG400026538 Solanum tuberosum HOM05D007994 ORTHO05D010092 9.1e-10 67.4 72 43.1
Solyc11g066940.2 Solanum lycopersicum HOM05D007994 ORTHO05D010092 1.2e-09 67.0 54 51.9
Sopen11g026660 Solanum pennellii HOM05D007994 ORTHO05D010092 1.2e-09 67.0 54 51.9
SalBow3G1236 Salvia bowleyana HOM05D007994 ORTHO05D010092 2.0e-09 66.2 62 45.2
FAN16G1405 Fragaria x ananassa HOM05D007994 ORTHO05D010092 2.7e-09 65.9 78 38.5
Medtr4g055130 Medicago truncatula HOM05D007994 ORTHO05D010092 4.5e-09 65.1 86 34.9
Peaxi162Scf00002g05422 Petunia axillaris HOM05D007994 ORTHO05D010092 1.0e-08 63.9 54 50.0
Rhsim01G0207500 Rhododendron simsii HOM05D007994 ORTHO05D010092 2.2e-08 62.8 89 39.3
Glyma.11G188500 Glycine max HOM05D007994 ORTHO05D010092 3.8e-08 62.0 64 42.2
VMungo1080G0008 Vigna mungo HOM05D007994 ORTHO05D010092 5.0e-08 61.6 73 35.6
Carub.0005s1038 Capsella rubella HOM05D007994 ORTHO05D010092 6.5e-08 61.2 42 50.0
Carub.0015s0006 Capsella rubella HOM05D007994 ORTHO05D010092 1.1e-07 60.5 42 50.0
AT3G44716 Arabidopsis thaliana HOM05D007994 ORTHO05D010092 1.5e-07 60.1 42 50.0
SEGI_15329 Sequoiadendron giganteum HOM05D007994 ORTHO05D010092 1.5e-07 60.1 47 48.9
Phvul.005G126500 Phaseolus vulgaris HOM05D007994 ORTHO05D010092 2.5e-07 59.3 62 37.1
Sp5g16480 Schrenkiella parvula HOM05D007994 ORTHO05D010092 2.5e-07 59.3 42 47.6
VMungo1127G0625 Vigna mungo HOM05D007994 ORTHO05D010092 2.5e-07 59.3 52 48.1
BcaB01g01144 Brassica carinata HOM05D007994 ORTHO05D010092 5.5e-07 58.2 40 47.5
A06p21760 Brassica napus HOM05D007994 ORTHO05D010092 5.5e-07 58.2 67 38.8
BraA06t25263Z Brassica rapa HOM05D007994 ORTHO05D010092 5.5e-07 58.2 67 38.8
Phvul.011G091200 Phaseolus vulgaris HOM05D007994 ORTHO05D010092 7.2e-07 57.8 64 42.2
AL5G22890 Arabidopsis lyrata HOM05D007994 ORTHO05D010092 1.2e-06 57.0 84 38.1
Lalb_Chr19g0136731 Lupinus albus HOM05D007994 ORTHO05D010092 2.1e-06 56.2 62 33.9


User provided reference genes

Program Settings