Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0820G081 Amborella trichopoda HOM05D000803 ORTHO05D007008 8.5e-45 183.3 95 100.0
ClCG08G002220 Citrullus lanatus HOM05D000803 ORTHO05D007008 2.8e-11 72.0 95 52.6
Dinv41069 Davidia involucrata HOM05D000803 ORTHO05D007008 8.0e-11 70.5 71 56.3
Dinv25877 Davidia involucrata HOM05D000803 ORTHO05D007008 2.3e-10 68.9 71 57.7
Sed0014094 Sechium edule HOM05D000803 ORTHO05D007008 2.3e-10 68.9 95 52.6
Ciclev10002691m.g Citrus clementina HOM05D000803 ORTHO05D007008 3.0e-10 68.6 92 53.3
Cfa018313 Carpinus fangiana HOM05D000803 ORTHO05D007008 5.2e-10 67.8 93 51.6
Hma1.2p1_0105F.1_g050550 Hydrangea macrophylla HOM05D000803 ORTHO05D007008 5.2e-10 67.8 91 46.2
Cpa.g.sc1027.2 Carica papaya HOM05D000803 ORTHO05D007008 6.8e-10 67.4 93 49.5
Ca_10681_v3 Cicer arietinum L. HOM05D000803 ORTHO05D007008 8.8e-10 67.0 88 50.0
CiPaw.15G015200 Carya illinoinensis HOM05D000803 ORTHO05D007008 1.2e-09 66.6 90 47.8
RcHm_v2.0_Chr6g0275081 Rosa chinensis HOM05D000803 ORTHO05D007008 1.2e-09 66.6 81 51.9
TAR381G0004 Trochodendron aralioides HOM05D000803 ORTHO05D007008 1.2e-09 66.6 80 53.8
MBI09_g13284_MAGBIO Magnolia biondii HOM05D000803 ORTHO05D007008 1.5e-09 66.2 91 49.5
Nn1g06068 Nelumbo nucifera HOM05D000803 ORTHO05D007008 2.0e-09 65.9 88 51.1
Actinidia10643 Actinidia chinensis HOM05D000803 ORTHO05D007008 2.6e-09 65.5 89 47.2
Aqoxy5G00856 Aquilegia oxysepala HOM05D000803 ORTHO05D007008 2.6e-09 65.5 84 51.2
CSS0028056 Camellia sinensis var. sinensis HOM05D000803 ORTHO05D007008 2.6e-09 65.5 97 48.5
vmacro12407 Vaccinium macrocarpon HOM05D000803 ORTHO05D007008 2.6e-09 65.5 71 57.7
COL.COLO4_29854 Corchorus olitorius HOM05D000803 ORTHO05D007008 3.4e-09 65.1 90 48.9
Haze_17764 Corylus avellana HOM05D000803 ORTHO05D007008 3.4e-09 65.1 108 45.4
MELO3C025023.2 Cucumis melo HOM05D000803 ORTHO05D007008 3.4e-09 65.1 95 49.5
Nn5g28767 Nelumbo nucifera HOM05D000803 ORTHO05D007008 9.8e-09 63.5 80 52.5
Gohir.A05G244100 Gossypium hirsutum HOM05D000803 ORTHO05D007008 1.3e-08 63.2 91 47.3
Gohir.D05G245100 Gossypium hirsutum HOM05D000803 ORTHO05D007008 1.3e-08 63.2 91 47.3
Gorai.009G254900 Gossypium raimondii HOM05D000803 ORTHO05D007008 1.3e-08 63.2 91 47.3
Thecc.08G154400 Theobroma cacao HOM05D000803 ORTHO05D007008 1.3e-08 63.2 95 50.5
CANSAT25G2976 Cannabis sativa HOM05D000803 ORTHO05D007008 1.7e-08 62.8 98 51.0
Psat1g027360 Pisum sativum HOM05D000803 ORTHO05D007008 1.7e-08 62.8 92 47.8
Actinidia17785 Actinidia chinensis HOM05D000803 ORTHO05D007008 2.2e-08 62.4 89 46.1
CiPaw.16G011100 Carya illinoinensis HOM05D000803 ORTHO05D007008 2.2e-08 62.4 50 60.0
Mapoly0166s0016 Marchantia polymorpha HOM05D000803 ORTHO05D007008 2.2e-08 62.4 40 67.5
CDE08G1588 Ceratophyllum demersum HOM05D000803 ORTHO05D007008 3.7e-08 61.6 52 61.5
PSO675G7586 Papaver somniferum HOM05D000803 ORTHO05D007008 3.7e-08 61.6 93 49.5
Medtr1g098660 Medicago truncatula HOM05D000803 ORTHO05D007008 4.9e-08 61.2 94 46.8
PSO541G3025 Papaver somniferum HOM05D000803 ORTHO05D007008 6.3e-08 60.8 48 62.5
FAN27G3502 Fragaria x ananassa HOM05D000803 ORTHO05D007008 8.3e-08 60.5 95 44.2
PSO734G0001 Papaver somniferum HOM05D000803 ORTHO05D007008 8.3e-08 60.5 33 78.8
GSVIVG01034548001 Vitis vinifera HOM05D000803 ORTHO05D007008 8.3e-08 60.5 74 54.1
A07p42400 Brassica napus HOM05D000803 ORTHO05D007008 1.1e-07 60.1 55 56.4
FAN15G1904 Fragaria x ananassa HOM05D000803 ORTHO05D007008 1.1e-07 60.1 96 43.8
C06p50970 Brassica napus HOM05D000803 ORTHO05D007008 1.4e-07 59.7 55 56.4
BolC6t40121H Brassica oleracea HOM05D000803 ORTHO05D007008 1.4e-07 59.7 55 56.4
FvH4_2g13460 Fragaria vesca HOM05D000803 ORTHO05D007008 1.4e-07 59.7 52 59.6
Atru.chr13.2085 Acer truncatum HOM05D000803 ORTHO05D007008 1.8e-07 59.3 92 47.8
TPR.G17024 Trifolium pratense HOM05D000803 ORTHO05D007008 1.8e-07 59.3 39 74.4
Duzib116G0573 Durio zibethinus HOM05D000803 ORTHO05D007008 2.4e-07 58.9 90 44.4
HanXRQChr11g0320301 Helianthus annuus HOM05D000803 ORTHO05D007008 2.4e-07 58.9 81 46.9
Sp5g31910 Schrenkiella parvula HOM05D000803 ORTHO05D007008 2.4e-07 58.9 94 40.4
BraA07t31766Z Brassica rapa HOM05D000803 ORTHO05D007008 3.1e-07 58.5 55 54.5
Solyc04g071560.4 Solanum lycopersicum HOM05D000803 ORTHO05D007008 3.1e-07 58.5 55 56.4
Sopen04g027540 Solanum pennellii HOM05D000803 ORTHO05D007008 3.1e-07 58.5 55 56.4
arahy.Tifrunner.gnm1.ann1.12I364 Arachis hypogaea HOM05D000803 ORTHO05D007008 4.1e-07 58.2 30 86.7
FAN24G3234 Fragaria x ananassa HOM05D000803 ORTHO05D007008 4.1e-07 58.2 96 41.7
Lj4A698T61 Lonicera japonica HOM05D000803 ORTHO05D007008 4.1e-07 58.2 83 49.4
Oeu046045.2 Olea europaea HOM05D000803 ORTHO05D007008 4.1e-07 58.2 30 86.7
Prupe.4G234300 Prunus persica HOM05D006298 ORTHO05D007008 4.1e-07 58.2 66 54.5
QL02p038779 Quercus lobata HOM05D000803 ORTHO05D007008 4.1e-07 58.2 30 86.7
SalBow7G1797 Salvia bowleyana HOM05D000803 ORTHO05D007008 4.1e-07 58.2 52 55.8
SalBow7G3643 Salvia bowleyana HOM05D000803 ORTHO05D007008 4.1e-07 58.2 52 55.8
Sc20g0003590 Simmondsia chinensis HOM05D000803 ORTHO05D007008 4.1e-07 58.2 38 73.7
PGSC0003DMG400024095 Solanum tuberosum HOM05D000803 ORTHO05D007008 4.1e-07 58.2 50 60.0
Zm00001eb140270 Zea mays HOM05D000803 ORTHO05D007008 4.1e-07 58.2 46 60.9
CDE06G0325 Ceratophyllum demersum HOM05D000803 ORTHO05D007008 5.4e-07 57.8 31 83.9
VMungo0720G0237 Vigna mungo HOM05D000803 ORTHO05D007008 5.4e-07 57.8 39 69.2
Carub.0001s3456 Capsella rubella HOM05D000803 ORTHO05D007008 7.0e-07 57.4 94 40.4
CAN.G1215.9 Capsicum annuum HOM05D000803 ORTHO05D007008 7.0e-07 57.4 95 44.2
Glyma.20G167700 Glycine max HOM05D000803 ORTHO05D007008 7.0e-07 57.4 90 40.0
Prupe.8G033500 Prunus persica HOM05D000803 ORTHO05D007008 7.0e-07 57.4 65 55.4
AL1G51610 Arabidopsis lyrata HOM05D000803 ORTHO05D007008 9.2e-07 57.0 82 43.9
arahy.Tifrunner.gnm1.ann1.8B02PA Arachis hypogaea HOM05D000803 ORTHO05D007008 9.2e-07 57.0 30 83.3
C06p00210 Brassica napus HOM05D000803 ORTHO05D007008 9.2e-07 57.0 72 48.6
Lj5g0019278 Lotus japonicus HOM05D000803 ORTHO05D007008 9.2e-07 57.0 94 50.0
Os01g0963400 Oryza sativa ssp. japonica HOM05D000803 ORTHO05D007008 9.2e-07 57.0 38 65.8
Aa31LG6G9940 Aethionema arabicum HOM05D006715 ORTHO05D008345 1.2e-06 56.6 96 43.8
EL10Ac1g01567 Beta vulgaris HOM05D000803 ORTHO05D007008 1.2e-06 56.6 45 60.0
BcaB07g33985 Brassica carinata HOM05D000803 ORTHO05D007008 1.2e-06 56.6 73 47.9
Cc10_g14920 Coffea canephora HOM05D000803 ORTHO05D007008 1.2e-06 56.6 97 44.3
Lalb_Chr02g0141441 Lupinus albus HOM05D000803 ORTHO05D007008 1.2e-06 56.6 96 43.8
MD10G1028500 Malus domestica HOM05D000803 ORTHO05D007008 1.2e-06 56.6 37 73.0
PGR044G2288 Punica granatum HOM05D000803 ORTHO05D007008 1.2e-06 56.6 36 69.4
PGR100G0008 Punica granatum HOM05D000803 ORTHO05D007008 1.2e-06 56.6 36 69.4
THA.LOC104812033 Tarenaya hassleriana HOM05D000803 ORTHO05D007008 1.2e-06 56.6 93 36.6
AL2G36910 Arabidopsis lyrata HOM05D000803 ORTHO05D007008 1.6e-06 56.2 60 50.0
AT1G76760 Arabidopsis thaliana HOM05D000803 ORTHO05D007008 1.6e-06 56.2 92 42.4
Carub.0002s2367 Capsella rubella HOM05D000803 ORTHO05D007008 1.6e-06 56.2 97 39.2
Manes.02G180500 Manihot esculenta HOM05D000803 ORTHO05D007008 1.6e-06 56.2 98 45.9
Phvul.007G080600 Phaseolus vulgaris HOM05D000803 ORTHO05D007008 1.6e-06 56.2 96 43.8
Rhsim06G0091500 Rhododendron simsii HOM05D000803 ORTHO05D007008 1.6e-06 56.2 30 83.3
BcaC08g42810 Brassica carinata HOM05D000803 ORTHO05D007008 2.0e-06 55.8 32 75.0
Thhalv10019218m.g Eutrema salsugineum HOM05D000803 ORTHO05D007008 2.0e-06 55.8 93 43.0
Glyma.10G224100 Glycine max HOM05D000803 ORTHO05D007008 2.0e-06 55.8 81 46.9
Manes.18G093000 Manihot esculenta HOM05D000803 ORTHO05D007008 2.0e-06 55.8 30 83.3
Potri.002G066800 Populus trichocarpa HOM05D000803 ORTHO05D007008 2.0e-06 55.8 97 45.4
Sp1g32430 Schrenkiella parvula HOM05D000803 ORTHO05D007008 2.0e-06 55.8 38 68.4
Aa31LG4G6830 Aethionema arabicum HOM05D000803 ORTHO05D007008 3.5e-06 55.1 94 38.3
AT1G43560 Arabidopsis thaliana HOM05D000803 ORTHO05D007008 3.5e-06 55.1 34 73.5
CARHR070300 Cardamine hirsuta HOM05D000803 ORTHO05D007008 3.5e-06 55.1 93 43.0
ECA232G0506 Erigeron canadensis HOM05D000803 ORTHO05D007008 3.5e-06 55.1 34 70.6
Eucgr.F04223 Eucalyptus grandis HOM05D000803 ORTHO05D007008 3.5e-06 55.1 30 80.0
Eucgr.F04229 Eucalyptus grandis HOM05D000803 ORTHO05D007008 3.5e-06 55.1 30 80.0
HPP92_004410 Vanilla planifolia HOM05D000803 ORTHO05D007008 3.5e-06 55.1 40 65.0
MD05G1027800 Malus domestica HOM05D000803 ORTHO05D007008 4.5e-06 54.7 64 53.1
THA.LOC104809204 Tarenaya hassleriana HOM05D000803 ORTHO05D007008 4.5e-06 54.7 94 40.4
DCAR_010094 Daucus carota HOM05D000803 ORTHO05D007008 5.9e-06 54.3 39 64.1
Sabra05G0147800 Salix brachista HOM05D000803 ORTHO05D007008 5.9e-06 54.3 30 80.0
TWI32G0734 Tripterygium wilfordii HOM05D000803 ORTHO05D007008 5.9e-06 54.3 30 80.0


User provided reference genes

Program Settings