Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0820G076 Amborella trichopoda HOM05D002879 ORTHO05D002930 4.7e-39 164.9 143 100.0
Dinv41066 Davidia involucrata HOM05D002879 ORTHO05D002930 1.7e-17 93.2 128 63.3
TAR625G0538 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.6e-15 86.7 143 52.4
Duzib116G0596 Durio zibethinus HOM05D002879 ORTHO05D002930 1.8e-14 83.2 126 54.0
Dinv25878 Davidia involucrata HOM05D002879 ORTHO05D002930 3.1e-14 82.4 130 66.9
Ciclev10002747m.g Citrus clementina HOM05D002879 ORTHO05D002930 8.9e-14 80.9 123 65.0
TAR625G0963 Trochodendron aralioides HOM05D002879 ORTHO05D002930 1.5e-13 80.1 124 44.4
Lalb_Chr03g0035371 Lupinus albus HOM05D002879 ORTHO05D002930 2.4e-11 72.8 88 55.7
vmacro01468 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.4e-11 72.8 78 52.6
Hma1.2p1_0240F.1_g100350 Hydrangea macrophylla HOM05D002879 ORTHO05D002930 7.1e-11 71.2 67 82.1
Eucgr.E02058 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.2e-10 70.5 95 68.4
Rhsim11G0085100 Rhododendron simsii HOM05D002879 ORTHO05D002930 1.2e-10 70.5 121 51.2
TPR.G31183 Trifolium pratense HOM05D002879 ORTHO05D002930 1.6e-10 70.1 85 65.9
QL02p029929 Quercus lobata HOM05D002879 ORTHO05D002930 6.0e-10 68.2 145 44.8
Nitab4.5_0001187g0090 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.0e-09 67.4 89 55.1
Nitab4.5_0002764g0010 Nicotiana tabacum HOM05D002879 ORTHO05D002930 1.7e-09 66.6 89 55.1
vmacro01469 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 2.3e-09 66.2 125 52.8
THA.LOC104809205 Tarenaya hassleriana HOM05D002879 ORTHO05D002930 3.0e-09 65.9 92 51.1
Rhsim11G0084200 Rhododendron simsii HOM05D002879 ORTHO05D002930 6.6e-09 64.7 124 46.8
Actinidia29538 Actinidia chinensis HOM05D002879 ORTHO05D002930 1.1e-08 63.9 89 50.6
AUR62026683 Chenopodium quinoa HOM05D002879 ORTHO05D002930 1.9e-08 63.2 127 59.1
Rhsim11G0085000 Rhododendron simsii HOM05D002879 ORTHO05D002930 2.5e-08 62.8 78 48.7
Thecc.08G154600 Theobroma cacao HOM05D002879 ORTHO05D002930 2.5e-08 62.8 128 49.2
MSTRG.25309 Avicennia marina HOM05D002879 ORTHO05D002930 3.3e-08 62.4 127 58.3
MBI09_g23868_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 3.3e-08 62.4 117 52.1
Atru.chr13.2082 Acer truncatum HOM05D002879 ORTHO05D002930 4.3e-08 62.0 117 51.3
Ah.05g168060 Amaranthus hybridus HOM05D002879 ORTHO05D002930 5.6e-08 61.6 121 48.8
GSVIVG01034550001 Vitis vinifera HOM05D002879 ORTHO05D002930 1.2e-07 60.5 94 62.8
CiPaw.16G010900 Carya illinoinensis HOM05D002879 ORTHO05D002930 1.6e-07 60.1 118 60.2
Cfa018310 Carpinus fangiana HOM05D002879 ORTHO05D002930 2.1e-07 59.7 89 56.2
Eucgr.E02063 Eucalyptus grandis HOM05D002879 ORTHO05D002930 2.1e-07 59.7 74 58.1
COL.COLO4_29858 Corchorus olitorius HOM05D002879 ORTHO05D002930 2.8e-07 59.3 124 60.5
MBI09_g23867_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 2.8e-07 59.3 124 58.9
arahy.Tifrunner.gnm1.ann1.HFKS8W Arachis hypogaea HOM05D002879 ORTHO05D002930 3.6e-07 58.9 93 69.9
arahy.Tifrunner.gnm1.ann1.MR10IA Arachis hypogaea HOM05D002879 ORTHO05D002930 3.6e-07 58.9 93 71.0
Glyma.10G224300 Glycine max HOM05D002879 ORTHO05D002930 3.6e-07 58.9 102 53.9
EL10Ac1g01577 Beta vulgaris HOM05D002879 ORTHO05D002930 4.7e-07 58.5 125 52.0
Eucgr.E02071 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.7e-07 58.5 95 51.6
FvH4_2g13410 Fragaria vesca HOM05D002879 ORTHO05D002930 4.7e-07 58.5 193 36.3
vmacro01464 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.7e-07 58.5 127 46.5
vmacro23419 Vaccinium macrocarpon HOM05D002879 ORTHO05D002930 4.7e-07 58.5 127 46.5
AUR62040592 Chenopodium quinoa HOM05D002879 ORTHO05D002930 6.2e-07 58.2 119 63.9
Ciclev10002749m.g Citrus clementina HOM05D002879 ORTHO05D002930 6.2e-07 58.2 123 57.7
MBI09_g20569_MAGBIO Magnolia biondii HOM05D002879 ORTHO05D002930 6.2e-07 58.2 124 58.9
MD10G1029000 Malus domestica HOM05D002879 ORTHO05D002930 8.1e-07 57.8 63 68.3
arahy.Tifrunner.gnm1.ann1.4FY7U3 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.4e-06 57.0 88 65.9
arahy.Tifrunner.gnm1.ann1.HS8YG8 Arachis hypogaea HOM05D002879 ORTHO05D002930 1.4e-06 57.0 88 52.3
Eucgr.F02697 Eucalyptus grandis HOM05D002879 ORTHO05D002930 1.4e-06 57.0 126 54.8
FAN15G0525 Fragaria x ananassa HOM05D002879 ORTHO05D002930 1.8e-06 56.6 193 43.0
FAN24G2761 Fragaria x ananassa HOM05D002879 ORTHO05D002930 2.4e-06 56.2 193 40.4
Aqoxy5G02058 Aquilegia oxysepala HOM05D002879 ORTHO05D002930 3.1e-06 55.8 99 38.4
CAN.G264.4 Capsicum annuum HOM05D002879 ORTHO05D002930 3.1e-06 55.8 119 49.6
Eucgr.E02064 Eucalyptus grandis HOM05D002879 ORTHO05D002930 4.0e-06 55.5 98 55.1
Eucgr.D00723 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.8e-06 54.7 132 53.8
Eucgr.E02065 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.8e-06 54.7 84 54.8
Eucgr.E02069 Eucalyptus grandis HOM05D002879 ORTHO05D002930 6.8e-06 54.7 84 54.8
Sc26g0002530 Simmondsia chinensis HOM05D002879 ORTHO05D002930 6.8e-06 54.7 61 49.2
Haze_17773 Corylus avellana HOM05D002879 ORTHO05D002930 8.9e-06 54.3 89 42.7


User provided reference genes

Program Settings