Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0820G069 Amborella trichopoda HOM05D000176 ORTHO05D000106 1.2e-114 416.4 198 100.0
ATR0602G201 Amborella trichopoda HOM05D000176 ORTHO05D008898 1.4e-17 94.0 88 55.7
ATR0681G174 Amborella trichopoda HOM05D007095 ORTHO05D000106 5.9e-16 88.6 87 55.2
ATR0980G006 Amborella trichopoda HOM05D007095 ORTHO05D008898 6.5e-15 85.1 87 54.0
ATR0807G030 Amborella trichopoda HOM05D007095 ORTHO05D008898 1.9e-14 83.6 87 52.9
ATR0609G083 Amborella trichopoda HOM05D007095 ORTHO05D000106 3.2e-14 82.8 78 56.4
ATR0171G045 Amborella trichopoda HOM05D007095 ORTHO05D008898 5.5e-14 82.0 87 50.6
ATR0594G218 Amborella trichopoda HOM05D007095 ORTHO05D000106 1.2e-13 80.9 88 51.1
ATR0743G249 Amborella trichopoda HOM05D007095 ORTHO05D008898 1.2e-13 80.9 87 54.0
ATR0314G038 Amborella trichopoda HOM05D000176 ORTHO05D008898 4.7e-13 79.0 88 50.0
ATR0326G005 Amborella trichopoda HOM05D000176 ORTHO05D000106 1.8e-12 77.0 88 48.9
ATR0568G225 Amborella trichopoda HOM05D000176 ORTHO05D008898 1.8e-12 77.0 87 49.4
Ciclev10014335m.g Citrus clementina HOM05D000176 ORTHO05D000106 2.6e-11 73.2 109 35.8
Prupe.3G169000 Prunus persica HOM05D000176 ORTHO05D000106 2.6e-11 73.2 109 36.7
Nitab4.5_0000476g0120 Nicotiana tabacum HOM05D000176 ORTHO05D000106 4.4e-11 72.4 109 36.7
GSVIVG01006780001 Vitis vinifera HOM05D000176 ORTHO05D000106 4.4e-11 72.4 109 34.9
Ah.16g107440 Amaranthus hybridus HOM05D000176 ORTHO05D000106 5.7e-11 72.0 109 36.7
Lj6g0005713 Lotus japonicus HOM05D000176 ORTHO05D000106 5.7e-11 72.0 109 35.8
Lalb_Chr20g0114151 Lupinus albus HOM05D000176 ORTHO05D000106 5.7e-11 72.0 109 35.8
Sopen05g034420 Solanum pennellii HOM05D000176 ORTHO05D000106 5.7e-11 72.0 109 35.8
EL10As19g24186 Beta vulgaris HOM05D000176 ORTHO05D000106 7.5e-11 71.6 109 35.8
Dinv18200 Davidia involucrata HOM05D000176 ORTHO05D000106 7.5e-11 71.6 109 35.8
PGR042G1331 Punica granatum HOM05D000176 ORTHO05D000106 7.5e-11 71.6 109 35.8
VMungo0540G2186 Vigna mungo HOM05D000176 ORTHO05D000106 7.5e-11 71.6 109 35.8
arahy.Tifrunner.gnm1.ann1.B0WW5W Arachis hypogaea HOM05D000176 ORTHO05D000106 9.8e-11 71.2 109 35.8
arahy.Tifrunner.gnm1.ann1.ZG7XLL Arachis hypogaea HOM05D000176 ORTHO05D000106 9.8e-11 71.2 109 35.8
MD09G1156100 Malus domestica HOM05D000176 ORTHO05D000106 9.8e-11 71.2 109 35.8
MD17G1142200 Malus domestica HOM05D000176 ORTHO05D000106 9.8e-11 71.2 109 35.8
Solyc05g056010.3 Solanum lycopersicum HOM05D000176 ORTHO05D000106 9.8e-11 71.2 109 35.8
ATR0144G006 Amborella trichopoda HOM05D007095 ORTHO05D008898 1.3e-10 70.9 74 48.6
MSTRG.10797 Avicennia marina HOM05D000176 ORTHO05D000106 1.3e-10 70.9 164 29.3
Psat5g183880 Pisum sativum HOM05D000176 ORTHO05D000106 1.3e-10 70.9 109 34.9
Hund07743 Selenicereus undatus HOM05D000176 ORTHO05D000106 1.3e-10 70.9 109 35.8
PGSC0003DMG400023346 Solanum tuberosum HOM05D000176 ORTHO05D000106 1.3e-10 70.9 109 35.8
Actinidia11188 Actinidia chinensis HOM05D000176 ORTHO05D000106 1.7e-10 70.5 109 34.9
QL08p043592 Quercus lobata HOM05D000176 ORTHO05D000106 1.7e-10 70.5 109 35.8
TPR.G1842 Trifolium pratense HOM05D000176 ORTHO05D000106 1.7e-10 70.5 109 34.9
Atru.chr6.3350 Acer truncatum HOM05D000176 ORTHO05D000106 2.2e-10 70.1 109 35.8
Ciclev10025397m.g Citrus clementina HOM05D000176 ORTHO05D000106 2.2e-10 70.1 109 35.8
Lalb_Chr15g0080531 Lupinus albus HOM05D000176 ORTHO05D000106 2.2e-10 70.1 109 34.9
Cpa.g.sc136.13 Carica papaya HOM05D000176 ORTHO05D000106 2.8e-10 69.7 109 34.9
Lj3C925T6 Lonicera japonica HOM05D000176 ORTHO05D000106 2.8e-10 69.7 109 34.9
CSS0002500 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.7e-10 69.3 109 34.9
CSS0014815 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 3.7e-10 69.3 109 34.9
Peaxi162Scf00384g01218 Petunia axillaris HOM05D000176 ORTHO05D000106 3.7e-10 69.3 119 33.6
RcHm_v2.0_Chr2g0150841 Rosa chinensis HOM05D000176 ORTHO05D000106 3.7e-10 69.3 109 34.9
Ca_14624_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 4.9e-10 68.9 110 34.5
MELO3C019704.2 Cucumis melo HOM05D000176 ORTHO05D000106 4.9e-10 68.9 109 34.9
CsaV3_6G015670 Cucumis sativus L. HOM05D000176 ORTHO05D000106 4.9e-10 68.9 109 34.9
Duzib211G0089 Durio zibethinus HOM05D000176 ORTHO05D000106 4.9e-10 68.9 109 34.9
Eucgr.A01958 Eucalyptus grandis HOM05D000176 ORTHO05D000106 4.9e-10 68.9 109 34.9
MD17G1142300 Malus domestica HOM05D000176 ORTHO05D000106 4.9e-10 68.9 109 35.8
Sed0012746 Sechium edule HOM05D000176 ORTHO05D000106 4.9e-10 68.9 109 34.9
THA.LOC104808853 Tarenaya hassleriana HOM05D000176 ORTHO05D000106 4.9e-10 68.9 109 36.7
Cc03_g14530 Coffea canephora HOM05D000176 ORTHO05D000106 6.3e-10 68.6 109 33.9
Duzib138G0102 Durio zibethinus HOM05D000176 ORTHO05D000106 6.3e-10 68.6 109 34.9
HanXRQChr09g0246821 Helianthus annuus HOM05D000176 ORTHO05D000106 6.3e-10 68.6 109 34.9
A04p19430 Brassica napus HOM05D000176 ORTHO05D000106 8.3e-10 68.2 109 33.9
BraA04t17538Z Brassica rapa HOM05D000176 ORTHO05D000106 8.3e-10 68.2 109 33.9
CANSAT56G1843 Cannabis sativa HOM05D000176 ORTHO05D000106 8.3e-10 68.2 109 34.9
ECA240G4387 Erigeron canadensis HOM05D000176 ORTHO05D000106 8.3e-10 68.2 109 33.9
Oeu063771.2 Olea europaea HOM05D000176 ORTHO05D000106 8.3e-10 68.2 109 33.9
CSS0028049 Camellia sinensis var. sinensis HOM05D001875 ORTHO05D000106 1.1e-09 67.8 109 33.0
CSS0045164 Camellia sinensis var. sinensis HOM05D000176 ORTHO05D000106 1.1e-09 67.8 109 33.0
AUR62038386 Chenopodium quinoa HOM05D000176 ORTHO05D000106 1.1e-09 67.8 109 33.9
AUR62038389 Chenopodium quinoa HOM05D000176 ORTHO05D000106 1.1e-09 67.8 109 33.9
FvH4_6g37771 Fragaria vesca HOM05D000176 ORTHO05D000106 1.1e-09 67.8 109 33.9
Gorai.001G193000 Gossypium raimondii HOM05D000176 ORTHO05D000106 1.1e-09 67.8 109 33.9
Aa31sc83G70 Aethionema arabicum HOM05D000176 ORTHO05D000106 1.4e-09 67.4 109 33.9
arahy.Tifrunner.gnm1.ann1.PINR01 Arachis hypogaea HOM05D000176 ORTHO05D000106 1.8e-09 67.0 109 36.7
Rhsim06G0121800 Rhododendron simsii HOM05D000176 ORTHO05D000106 1.8e-09 67.0 109 32.1
ATR1100G024 Amborella trichopoda HOM05D007095 ORTHO05D008898 2.4e-09 66.6 59 57.6
AT2G25010 Arabidopsis thaliana HOM05D000176 ORTHO05D000106 2.4e-09 66.6 109 32.1
BolC4t27041H Brassica oleracea HOM05D000176 ORTHO05D000106 2.4e-09 66.6 109 33.0
RcHm_v2.0_Chr5g0052481 Rosa chinensis HOM05D000176 ORTHO05D000106 2.4e-09 66.6 109 34.9
arahy.Tifrunner.gnm1.ann1.6TXF5J Arachis hypogaea HOM05D000176 ORTHO05D000106 3.1e-09 66.2 109 35.8
Migut.K00126 Erythranthe guttata HOM05D000176 ORTHO05D000106 3.1e-09 66.2 109 33.0
FvH4_3g28611 Fragaria vesca HOM05D000176 ORTHO05D000106 3.1e-09 66.2 109 34.9
Sabra02G0169600 Salix brachista HOM05D000176 ORTHO05D000106 3.1e-09 66.2 109 33.0
Ca_23329_v3 Cicer arietinum L. HOM05D000176 ORTHO05D000106 4.1e-09 65.9 109 35.8
Thhalv10002429m.g Eutrema salsugineum HOM05D000176 ORTHO05D000106 4.1e-09 65.9 109 33.9
Sp4g03990 Schrenkiella parvula HOM05D000176 ORTHO05D000106 4.1e-09 65.9 109 33.0
Aa31sc575G20 Aethionema arabicum HOM05D000176 ORTHO05D000106 5.4e-09 65.5 109 33.9
CARHR102890 Cardamine hirsuta HOM05D000176 ORTHO05D000106 5.4e-09 65.5 109 33.0
Thhalv10000135m.g Eutrema salsugineum HOM05D000176 ORTHO05D000106 5.4e-09 65.5 109 33.0
Lsat_1_v5_gn_7_67341 Lactuca sativa HOM05D000176 ORTHO05D000106 5.4e-09 65.5 109 33.0
THA.LOC104823099 Tarenaya hassleriana HOM05D000176 ORTHO05D000106 5.4e-09 65.5 109 31.2
Atru.chr6.3553_Atru.chr6.3554 Acer truncatum HOM05D000176 ORTHO05D000106 7.0e-09 65.1 109 32.1
ATR0629G103 Amborella trichopoda HOM05D007095 ORTHO05D008898 7.0e-09 65.1 56 58.9
Psat4g187840 Pisum sativum HOM05D000176 ORTHO05D000106 7.0e-09 65.1 109 34.9
FvH4_6g33711 Fragaria vesca HOM05D000176 ORTHO05D000106 9.2e-09 64.7 109 36.7
QL05p010466 Quercus lobata HOM05D000176 ORTHO05D000106 9.2e-09 64.7 109 35.8
Sp3g23470 Schrenkiella parvula HOM05D000176 ORTHO05D000106 9.2e-09 64.7 109 33.0
BcaC02g08378 Brassica carinata HOM05D000176 ORTHO05D000106 1.2e-08 64.3 109 32.1
A03p44500 Brassica napus HOM05D000176 ORTHO05D000106 1.2e-08 64.3 109 32.1
C03p55310 Brassica napus HOM05D000176 ORTHO05D000106 1.2e-08 64.3 109 32.1
C04p55010 Brassica napus HOM05D000176 ORTHO05D000106 1.2e-08 64.3 109 32.1
BolC3t17803H Brassica oleracea HOM05D000176 ORTHO05D000106 1.2e-08 64.3 109 32.1
BraA03t13583Z Brassica rapa HOM05D000176 ORTHO05D000106 1.2e-08 64.3 109 32.1
ClCG09G020530 Citrullus lanatus HOM05D000176 ORTHO05D000106 1.2e-08 64.3 112 33.9
MELO3C002881.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.2e-08 64.3 112 33.9
CsaV3_5G025870 Cucumis sativus L. HOM05D000176 ORTHO05D000106 1.2e-08 64.3 112 33.9
RcHm_v2.0_Chr2g0143601 Rosa chinensis HOM05D000176 ORTHO05D000106 1.2e-08 64.3 109 35.8
Prupe.4G252400 Prunus persica HOM05D000176 ORTHO05D000106 1.6e-08 63.9 109 33.9
BcaB06g28031 Brassica carinata HOM05D000176 ORTHO05D000106 2.0e-08 63.5 109 31.2
Lj3g0023710 Lotus japonicus HOM05D000176 ORTHO05D000106 2.7e-08 63.2 109 35.8
GSVIVG01017117001 Vitis vinifera HOM05D000176 ORTHO05D003511 2.7e-08 63.2 109 37.6
AL3G42490 Arabidopsis lyrata HOM05D000176 ORTHO05D000106 3.5e-08 62.8 109 32.1
AT2G04865 Arabidopsis thaliana HOM05D000176 ORTHO05D000106 3.5e-08 62.8 109 32.1
Sabra01G0157300 Salix brachista HOM05D000176 ORTHO05D000106 3.5e-08 62.8 109 32.1
TWI36G1460 Tripterygium wilfordii HOM05D000176 ORTHO05D000106 3.5e-08 62.8 109 32.1
Sed0026480 Sechium edule HOM05D000176 ORTHO05D000106 4.5e-08 62.4 112 34.8
AL4G16100 Arabidopsis lyrata HOM05D000176 ORTHO05D000106 1.3e-07 60.8 109 30.3
MD09G1191600 Malus domestica HOM05D000176 ORTHO05D000106 1.3e-07 60.8 109 34.9
ATR0782G156 Amborella trichopoda HOM05D007095 ORTHO05D008898 1.7e-07 60.5 64 43.8
Prupe.3G047800 Prunus persica HOM05D000176 ORTHO05D000106 6.6e-07 58.5 105 33.3
MELO3C022946.2 Cucumis melo HOM05D000176 ORTHO05D000106 1.5e-06 57.4 110 32.7
VMungo1309G0077 Vigna mungo HOM05D000176 ORTHO05D000106 1.5e-06 57.4 109 33.0
CsaV3_5G015580 Cucumis sativus L. HOM05D000176 ORTHO05D000106 1.9e-06 57.0 110 32.7
Sed0014738 Sechium edule HOM05D000176 ORTHO05D000106 2.5e-06 56.6 126 29.4
ATR0629G047 Amborella trichopoda HOM05D000176 ORTHO05D008898 5.6e-06 55.5 44 61.4
ECA234G2551 Erigeron canadensis HOM05D000002 ORTHO05D000001 5.6e-06 55.5 193 25.9
ClCG11G000230 Citrullus lanatus HOM05D000176 ORTHO05D000106 7.3e-06 55.1 110 32.7
THA.LOC104799018 Tarenaya hassleriana HOM05D000176 ORTHO05D000106 9.5e-06 54.7 105 32.4


User provided reference genes

Program Settings