Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0820G064 Amborella trichopoda HOM05D006357 ORTHO05D007925 5.5e-94 347.8 200 100.0
ATR0820G202 Amborella trichopoda HOM05D006357 ORTHO05D007925 9.5e-46 187.6 200 58.0
Aa31LG4G13870 Aethionema arabicum HOM05D004825 ORTHO05D005415 1.5e-35 153.7 187 47.1
Aqoxy2G01095 Aquilegia oxysepala HOM05D006357 ORTHO05D007925 1.5e-35 153.7 192 43.2
Prupe.6G132600 Prunus persica HOM05D006357 ORTHO05D007925 2.0e-35 153.3 183 47.0
Rhsim01G0204700 Rhododendron simsii HOM05D006357 ORTHO05D007925 2.6e-35 152.9 182 46.2
Manes.11G162800 Manihot esculenta HOM05D006357 ORTHO05D007925 5.8e-35 151.8 183 46.4
TAR633G1946 Trochodendron aralioides HOM05D006357 ORTHO05D007925 1.7e-34 150.2 185 46.5
EL10Ac7g15835 Beta vulgaris HOM05D006357 ORTHO05D007925 2.2e-34 149.8 179 46.4
PGR119G0351 Punica granatum HOM05D006357 ORTHO05D007925 2.2e-34 149.8 181 48.1
Atru.chr3.3206 Acer truncatum HOM05D006357 ORTHO05D007925 3.7e-34 149.1 180 47.2
Aqoxy4G02740 Aquilegia oxysepala HOM05D006357 ORTHO05D007925 3.7e-34 149.1 182 50.5
QL01p012073 Quercus lobata HOM05D006357 ORTHO05D007925 3.7e-34 149.1 183 45.4
Atru.chr3.3208 Acer truncatum HOM05D006357 ORTHO05D007925 4.9e-34 148.7 180 47.2
unitig_699.g19178 Utricularia gibba HOM05D006357 ORTHO05D007925 4.9e-34 148.7 175 49.1
CSS0003287 Camellia sinensis var. sinensis HOM05D006357 ORTHO05D007925 1.1e-33 147.5 180 46.1
Gohir.D07G114400 Gossypium hirsutum HOM05D006357 ORTHO05D007925 1.1e-33 147.5 184 44.6
Nn6g34850 Nelumbo nucifera HOM05D006357 ORTHO05D007925 1.1e-33 147.5 178 47.2
Sp5g16810 Schrenkiella parvula HOM05D006357 ORTHO05D007925 1.4e-33 147.1 183 46.4
A06p22010 Brassica napus HOM05D006357 ORTHO05D007925 1.8e-33 146.7 183 45.4
BraA06t25289Z Brassica rapa HOM05D006357 ORTHO05D007925 1.8e-33 146.7 183 45.4
Sc06g0008780 Simmondsia chinensis HOM05D006357 ORTHO05D007925 2.4e-33 146.4 176 42.0
FvH4_3g25140 Fragaria vesca HOM05D006357 ORTHO05D007925 3.2e-33 146.0 180 47.2
Migut.N02483 Erythranthe guttata HOM05D006357 ORTHO05D007925 4.1e-33 145.6 174 46.6
Thecc.09G281200 Theobroma cacao HOM05D006357 ORTHO05D007925 4.1e-33 145.6 180 46.1
CARHR104480 Cardamine hirsuta HOM05D006357 ORTHO05D007925 7.0e-33 144.8 183 45.4
FAN21G3578 Fragaria x ananassa HOM05D006357 ORTHO05D007925 7.0e-33 144.8 180 47.2
FAN25G2095 Fragaria x ananassa HOM05D006357 ORTHO05D007925 7.0e-33 144.8 177 45.2
MBI01_g14623_MAGBIO Magnolia biondii HOM05D006357 ORTHO05D007925 7.0e-33 144.8 182 44.5
SalBow3G2384 Salvia bowleyana HOM05D006357 ORTHO05D007925 7.0e-33 144.8 175 45.1
Eucgr.J00502 Eucalyptus grandis HOM05D006357 ORTHO05D007925 9.2e-33 144.4 180 47.2
Lj2P966T16 Lonicera japonica HOM05D006357 ORTHO05D007925 9.2e-33 144.4 180 45.0
PGR102G0344 Punica granatum HOM05D006357 ORTHO05D007925 9.2e-33 144.4 181 44.2
BcaB01g01165 Brassica carinata HOM05D006357 ORTHO05D007925 1.2e-32 144.1 181 45.9
Gohir.A07G110700 Gossypium hirsutum HOM05D006357 ORTHO05D007925 1.6e-32 143.7 184 43.5
Gohir.D08G016000 Gossypium hirsutum HOM05D006357 ORTHO05D007925 1.6e-32 143.7 184 43.5
Gorai.001G122700 Gossypium raimondii HOM05D006357 ORTHO05D007925 1.6e-32 143.7 184 43.5
Gorai.004G010300 Gossypium raimondii HOM05D006357 ORTHO05D007925 1.6e-32 143.7 184 43.5
RcHm_v2.0_Chr5g0046241 Rosa chinensis HOM05D006357 ORTHO05D007925 1.6e-32 143.7 183 43.2
Ah.08g215640 Amaranthus hybridus HOM05D006357 ORTHO05D007925 2.0e-32 143.3 184 45.7
Thhalv10010749m.g Eutrema salsugineum HOM05D006357 ORTHO05D007925 2.0e-32 143.3 183 45.4
FvH4_3g25160 Fragaria vesca HOM05D006357 ORTHO05D007925 2.0e-32 143.3 177 44.6
QL01p012091 Quercus lobata HOM05D006357 ORTHO05D007925 2.0e-32 143.3 183 44.3
VMungo1127G1055 Vigna mungo HOM05D006357 ORTHO05D007925 2.0e-32 143.3 180 46.1
GSVIVG01036107001 Vitis vinifera HOM05D006357 ORTHO05D007925 2.0e-32 143.3 184 46.2
Duzib150G0376 Durio zibethinus HOM05D006357 ORTHO05D007925 2.7e-32 142.9 180 43.9
MD11G1166600 Malus domestica HOM05D006357 ORTHO05D007925 2.7e-32 142.9 190 42.6
Gohir.A08G005700 Gossypium hirsutum HOM05D006357 ORTHO05D007925 3.5e-32 142.5 191 42.4
CiPaw.13G134700 Carya illinoinensis HOM05D006357 ORTHO05D007925 4.6e-32 142.1 180 43.9
THA.LOC104814785 Tarenaya hassleriana HOM05D006357 ORTHO05D007925 4.6e-32 142.1 184 46.7
Glyma.11G182400 Glycine max HOM05D006357 ORTHO05D007925 7.8e-32 141.4 180 44.4
PSO801G0234 Papaver somniferum HOM05D006357 ORTHO05D007925 7.8e-32 141.4 191 43.5
Sabra16G0125700 Salix brachista HOM05D006357 ORTHO05D007925 1.0e-31 141.0 184 44.6
BcaC01g02047 Brassica carinata HOM05D006357 ORTHO05D007925 1.3e-31 140.6 183 44.3
C03p69190 Brassica napus HOM05D006357 ORTHO05D007925 1.3e-31 140.6 183 44.3
BolC3t19173H Brassica oleracea HOM05D006357 ORTHO05D007925 1.3e-31 140.6 183 44.3
ClCG02G022220 Citrullus lanatus HOM05D006357 ORTHO05D007925 1.3e-31 140.6 183 45.9
Ciclev10029363m.g Citrus clementina HOM05D006357 ORTHO05D007925 1.7e-31 140.2 180 44.4
MD03G1147800 Malus domestica HOM05D006357 ORTHO05D007925 2.3e-31 139.8 180 42.8
Carub.0005s1011 Capsella rubella HOM05D006357 ORTHO05D007925 3.0e-31 139.4 183 43.2
AT3G44380 Arabidopsis thaliana HOM05D006357 ORTHO05D007925 3.9e-31 139.0 183 43.7
CsaV3_6G038350 Cucumis sativus L. HOM05D006357 ORTHO05D007925 3.9e-31 139.0 183 45.4
Phvul.011G095000 Phaseolus vulgaris HOM05D006357 ORTHO05D007925 3.9e-31 139.0 184 44.0
Dinv22833 Davidia involucrata HOM05D006357 ORTHO05D007925 5.0e-31 138.7 191 40.8
PSO339G3266 Papaver somniferum HOM05D006357 ORTHO05D007925 5.0e-31 138.7 191 42.4
Prupe.6G132700 Prunus persica HOM05D006357 ORTHO05D007925 5.0e-31 138.7 183 42.6
arahy.Tifrunner.gnm1.ann1.5186VC Arachis hypogaea HOM05D006357 ORTHO05D007925 6.6e-31 138.3 188 43.1
MSTRG.12374 Avicennia marina HOM05D006357 ORTHO05D007925 6.6e-31 138.3 175 42.9
Cc01_g08980 Coffea canephora HOM05D006357 ORTHO05D007925 6.6e-31 138.3 180 45.0
arahy.Tifrunner.gnm1.ann1.JXBE2X Arachis hypogaea HOM05D006357 ORTHO05D007925 8.6e-31 137.9 188 43.1
MELO3C014499.2 Cucumis melo HOM05D006357 ORTHO05D007925 8.6e-31 137.9 183 45.4
CANSAT54G2809 Cannabis sativa HOM05D006357 ORTHO05D007925 1.1e-30 137.5 180 42.8
Lsat_1_v5_gn_1_59200 Lactuca sativa HOM05D006357 ORTHO05D007925 1.1e-30 137.5 180 44.4
Potri.001G218400 Populus trichocarpa HOM05D006357 ORTHO05D007925 1.1e-30 137.5 184 42.4
Sc21g0007020 Simmondsia chinensis HOM05D006357 ORTHO05D007925 1.5e-30 137.1 183 43.7
TWI75G1708 Tripterygium wilfordii HOM05D006357 ORTHO05D007925 1.5e-30 137.1 183 43.2
TWI79G0514 Tripterygium wilfordii HOM05D006357 ORTHO05D007925 1.5e-30 137.1 180 44.4
FAN11G2870 Fragaria x ananassa HOM05D006357 ORTHO05D007925 1.9e-30 136.7 171 43.9
Lalb_Chr01g0004891 Lupinus albus HOM05D006357 ORTHO05D007925 1.9e-30 136.7 180 43.9
Nitab4.5_0006120g0030 Nicotiana tabacum HOM05D006357 ORTHO05D007925 1.9e-30 136.7 180 43.3
Actinidia37077 Actinidia chinensis HOM05D006357 ORTHO05D007925 2.5e-30 136.3 182 45.1
AL5G22540 Arabidopsis lyrata HOM05D006357 ORTHO05D007925 3.3e-30 136.0 183 42.6
Os08g0558300 Oryza sativa ssp. japonica HOM05D006357 ORTHO05D007925 3.3e-30 136.0 178 42.1
Solyc11g068550.1 Solanum lycopersicum HOM05D006357 ORTHO05D007925 5.6e-30 135.2 180 42.8
Sopen11g027270 Solanum pennellii HOM05D006357 ORTHO05D007925 5.6e-30 135.2 180 42.8
SGA_v2.0_scaffold177G39425 Striga asiatica HOM05D006357 ORTHO05D007925 9.5e-30 134.4 185 43.8
Medtr4g052840 Medicago truncatula HOM05D006357 ORTHO05D007925 1.2e-29 134.0 180 44.4
Nitab4.5_0005641g0010 Nicotiana tabacum HOM05D006357 ORTHO05D007925 1.2e-29 134.0 180 42.2
Lalb_Chr03g0028161 Lupinus albus HOM05D006357 ORTHO05D007925 1.6e-29 133.7 182 45.6
Ca_26666_v3 Cicer arietinum L. HOM05D006357 ORTHO05D007925 2.8e-29 132.9 180 43.3
Ca_19414_v3 Cicer arietinum L. HOM05D006357 ORTHO05D007925 4.7e-29 132.1 183 42.6
Lj3g0017887 Lotus japonicus HOM05D006357 ORTHO05D007925 1.1e-28 131.0 180 42.8
Psat7g187640 Pisum sativum HOM05D006357 ORTHO05D007925 1.1e-28 131.0 188 42.6
Cfa010003 Carpinus fangiana HOM05D006357 ORTHO05D007925 1.4e-28 130.6 175 40.6
HanXRQChr01g0024501 Helianthus annuus HOM05D006357 ORTHO05D007925 3.1e-28 129.4 181 42.0
Pp3c2_16750 Physcomitrium patens HOM05D006357 ORTHO05D007925 5.2e-28 128.6 194 39.7
Hma1.2p1_0587F.1_g184180 Hydrangea macrophylla HOM05D006357 ORTHO05D007925 8.9e-28 127.9 180 41.1
TPR.G17225 Trifolium pratense HOM05D006357 ORTHO05D007925 8.9e-28 127.9 197 42.1
ATR0820G128 Amborella trichopoda HOM05D006357 ORTHO05D007925 2.0e-27 126.7 160 57.5
Sed0020794 Sechium edule HOM05D006357 ORTHO05D007925 2.2e-26 123.2 178 42.7
Haze_23361 Corylus avellana HOM05D006357 ORTHO05D007925 2.9e-26 122.9 168 43.5
DCAR_006168 Daucus carota HOM05D006357 ORTHO05D007925 6.4e-26 121.7 183 38.3
AagrBONN_evm.TU.Sc2ySwM_117.3687 Anthoceros agrestis HOM05D006357 ORTHO05D007925 1.1e-25 120.9 186 38.7
Dinv42541 Davidia involucrata HOM05D006357 ORTHO05D007925 5.4e-25 118.6 168 42.3
SEGI_40876 Sequoiadendron giganteum HOM05D006357 ORTHO05D007925 7.0e-25 118.2 177 39.0
SMO347G0335 Selaginella moellendorffii HOM05D006357 ORTHO05D007925 9.2e-25 117.9 121 47.1
Pp3c21_10640 Physcomitrium patens HOM05D006357 ORTHO05D007925 1.2e-24 117.5 198 38.4
Mapoly0079s0020 Marchantia polymorpha HOM05D006357 ORTHO05D007925 1.6e-24 117.1 185 38.4
Nn6g34849 Nelumbo nucifera HOM05D006357 ORTHO05D007925 1.3e-23 114.0 175 40.6
Ah.15g095880 Amaranthus hybridus HOM05D006357 ORTHO05D007925 3.0e-23 112.8 192 37.5
AUR62009745 Chenopodium quinoa HOM05D006357 ORTHO05D007925 1.9e-22 110.2 192 36.5
AUR62036192 Chenopodium quinoa HOM05D006357 ORTHO05D007925 1.9e-22 110.2 193 36.3
PSO339G1489 Papaver somniferum HOM05D006357 ORTHO05D007925 2.5e-22 109.8 158 42.4
PSO384G0917 Papaver somniferum HOM05D006357 ORTHO05D007925 5.6e-22 108.6 160 41.9
Actinidia35469 Actinidia chinensis HOM05D006357 ORTHO05D007925 2.3e-20 103.2 93 55.9
ECA248G3754 Erigeron canadensis HOM05D006357 ORTHO05D007925 5.2e-20 102.1 141 43.3
PGSC0003DMG400026335 Solanum tuberosum HOM05D006357 ORTHO05D007925 1.5e-19 100.5 104 51.0
AUR62036201 Chenopodium quinoa HOM05D006357 ORTHO05D007925 2.2e-18 96.7 149 40.9
Pp3c9_9450 Physcomitrium patens HOM05D006357 ORTHO05D007925 1.2e-16 90.9 161 33.5
RcHm_v2.0_Chr5g0046191 Rosa chinensis HOM05D006357 ORTHO05D007925 2.1e-13 80.1 122 38.5
AUR62036200 Chenopodium quinoa HOM05D006357 ORTHO05D007925 2.8e-13 79.7 91 42.9
Cpa.g.sc195.8 Carica papaya HOM05D006357 ORTHO05D007925 1.8e-12 77.0 111 44.1
AUR62044742 Chenopodium quinoa HOM05D006357 ORTHO05D007925 3.0e-07 59.7 71 47.9


User provided reference genes

Program Settings