Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0820G036 Amborella trichopoda HOM05D024769 ORTHO05D010553 1.6e-198 696.0 388 100.0
TAR633G2541 Trochodendron aralioides HOM05D011404 ORTHO05D010553 2.3e-19 100.9 378 32.0
Nn2g13996 Nelumbo nucifera HOM05D011404 ORTHO05D010553 1.6e-17 94.7 115 49.6
Nn6g35047 Nelumbo nucifera HOM05D011404 ORTHO05D010553 4.7e-17 93.2 319 32.9
TAR623G0178 Trochodendron aralioides HOM05D011404 ORTHO05D010553 1.8e-16 91.3 399 35.8
Haze_23449 Corylus avellana HOM05D011404 ORTHO05D010553 1.2e-15 88.6 99 47.5
Aqoxy1G00938 Aquilegia oxysepala HOM05D011404 ORTHO05D010553 3.4e-15 87.0 118 45.8
Cfa010082 Carpinus fangiana HOM05D011404 ORTHO05D010553 2.4e-13 80.9 100 43.0
CsaV3_6G014740 Cucumis sativus L. HOM05D024769 ORTHO05D010553 3.9e-11 73.6 110 40.9
MELO3C021450.2 Cucumis melo HOM05D024769 ORTHO05D010553 1.5e-10 71.6 110 40.0
Dinv12524 Davidia involucrata HOM05D011404 ORTHO05D010553 1.9e-10 71.2 369 28.7
ClCG02G021920 Citrullus lanatus HOM05D024769 ORTHO05D010553 3.3e-10 70.5 108 40.7
HanXRQChr14g0451971 Helianthus annuus HOM05D011877 ORTHO05D010553 4.3e-10 70.1 103 41.7
Potri.004G188300 Populus trichocarpa HOM05D011404 ORTHO05D010553 2.1e-09 67.8 101 43.6
Phvul.011G090200 Phaseolus vulgaris HOM05D011197 ORTHO05D010553 3.6e-09 67.0 101 44.6
Potri.009G149000 Populus trichocarpa HOM05D011404 ORTHO05D010553 3.6e-09 67.0 289 28.4
Nitab4.5_0001453g0080 Nicotiana tabacum HOM05D011877 ORTHO05D010553 8.1e-09 65.9 103 38.8
Lsat_1_v5_gn_2_96940 Lactuca sativa HOM05D011877 ORTHO05D010553 1.1e-08 65.5 103 42.7
QL01p013727 Quercus lobata HOM05D011404 ORTHO05D010553 1.8e-08 64.7 112 42.0
Manes.11G157000 Manihot esculenta HOM05D011404 ORTHO05D010553 3.1e-08 63.9 349 26.6
Sabra04G0127300 Salix brachista HOM05D011404 ORTHO05D010553 6.8e-08 62.8 304 30.3
Sabra09G0117600 Salix brachista HOM05D011404 ORTHO05D010553 8.9e-08 62.4 303 27.1
Eucgr.J00427 Eucalyptus grandis HOM05D024769 ORTHO05D010553 1.5e-07 61.6 123 37.4
Nitab4.5_0009666g0020 Nicotiana tabacum HOM05D011877 ORTHO05D010553 2.6e-07 60.8 97 41.2
Thecc.09G291600 Theobroma cacao HOM05D011197 ORTHO05D010553 2.6e-07 60.8 104 39.4
Psat7g190520 Pisum sativum HOM05D011197 ORTHO05D010553 4.4e-07 60.1 100 39.0
VMungo1127G2265 Vigna mungo HOM05D011197 ORTHO05D010553 4.4e-07 60.1 99 40.4
Manes.04G008500 Manihot esculenta HOM05D011404 ORTHO05D010553 5.8e-07 59.7 102 40.2
Peaxi162Scf00789g00061 Petunia axillaris HOM05D011877 ORTHO05D010553 7.5e-07 59.3 106 41.5
Sopen06g031020 Solanum pennellii HOM05D011877 ORTHO05D010553 9.8e-07 58.9 96 39.6
PGSC0003DMG400007124 Solanum tuberosum HOM05D011877 ORTHO05D010553 9.8e-07 58.9 97 40.2
Lsat_1_v5_gn_1_61941 Lactuca sativa HOM05D011877 ORTHO05D010553 1.7e-06 58.2 107 33.6
Glyma.12G085100 Glycine max HOM05D011197 ORTHO05D010553 2.2e-06 57.8 100 36.0
Lj3g0007201 Lotus japonicus HOM05D011197 ORTHO05D010553 2.2e-06 57.8 103 39.8
Gohir.D05G086600 Gossypium hirsutum HOM05D011197 ORTHO05D010553 2.9e-06 57.4 102 38.2
Gorai.009G088300 Gossypium raimondii HOM05D011197 ORTHO05D010553 3.7e-06 57.0 101 37.6
Lj2P994T14 Lonicera japonica HOM05D011877 ORTHO05D010553 3.7e-06 57.0 102 36.3
Solyc06g074550.3 Solanum lycopersicum HOM05D011877 ORTHO05D010553 3.7e-06 57.0 96 38.5
Gohir.A05G083700 Gossypium hirsutum HOM05D011197 ORTHO05D010553 8.3e-06 55.8 102 37.3
TPR.G15575 Trifolium pratense HOM05D011197 ORTHO05D010553 8.3e-06 55.8 100 37.0


User provided reference genes

Program Settings