Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0820G021 Amborella trichopoda HOM05D005065 ORTHO05D005944 3.0e-98 362.1 214 100.0
ATR0003G028 Amborella trichopoda HOM05D005065 ORTHO05D005944 3.3e-89 332.0 214 91.6
Nn5g27677 Nelumbo nucifera HOM05D005065 ORTHO05D005944 4.9e-16 89.0 156 39.1
Nn1g08370 Nelumbo nucifera HOM05D005065 ORTHO05D005944 4.1e-15 85.9 185 39.5
Manes.18G101500 Manihot esculenta HOM05D005065 ORTHO05D005944 9.2e-15 84.7 179 38.5
QL02p033454 Quercus lobata HOM05D005065 ORTHO05D005944 1.2e-14 84.3 219 34.2
Cfa013844 Carpinus fangiana HOM05D005065 ORTHO05D005944 1.6e-14 84.0 218 33.0
CAN.G199.8 Capsicum annuum HOM05D005065 ORTHO05D005944 2.1e-14 83.6 162 35.2
CiPaw.07G160300 Carya illinoinensis HOM05D005065 ORTHO05D005944 2.1e-14 83.6 226 34.5
Ca_10622_v3 Cicer arietinum L. HOM05D005065 ORTHO05D005944 2.1e-14 83.6 209 34.0
PGSC0003DMG400026113 Solanum tuberosum HOM05D005065 ORTHO05D005944 2.7e-14 83.2 181 36.5
Haze_22517 Corylus avellana HOM05D005065 ORTHO05D005944 4.6e-14 82.4 219 32.9
Solyc06g065340.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 4.6e-14 82.4 164 36.6
Gohir.A05G275300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 7.8e-14 81.6 193 34.7
TPR.G8826 Trifolium pratense HOM05D005065 ORTHO05D005944 7.8e-14 81.6 209 34.0
Duzib177G1167 Durio zibethinus HOM05D005065 ORTHO05D005944 1.0e-13 81.3 215 38.6
Gohir.A13G121100 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.0e-13 81.3 177 42.9
Gohir.D05G277400 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.0e-13 81.3 165 36.4
Gorai.009G290400 Gossypium raimondii HOM05D005065 ORTHO05D005944 1.0e-13 81.3 165 36.4
Aqoxy5G02380 Aquilegia oxysepala HOM05D005065 ORTHO05D005944 1.7e-13 80.5 154 39.6
Potri.013G111700 Populus trichocarpa HOM05D005065 ORTHO05D005944 2.3e-13 80.1 221 33.5
Glyma.10G217400 Glycine max HOM05D005065 ORTHO05D005944 3.9e-13 79.3 192 35.9
Gohir.D13G125200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 3.9e-13 79.3 176 41.5
Gorai.013G140100 Gossypium raimondii HOM05D005065 ORTHO05D005944 3.9e-13 79.3 176 41.5
Phvul.007G088700 Phaseolus vulgaris HOM05D005065 ORTHO05D005944 1.5e-12 77.4 205 40.5
Psat6g187880 Pisum sativum HOM05D005065 ORTHO05D005944 1.5e-12 77.4 200 34.5
Duzib211G0507 Durio zibethinus HOM05D005065 ORTHO05D005944 1.9e-12 77.0 209 34.4
Oeu029996.1 Olea europaea HOM05D005065 ORTHO05D005944 2.5e-12 76.6 200 33.0
VMungo0720G1099 Vigna mungo HOM05D005065 ORTHO05D005944 3.3e-12 76.3 207 39.1
Sopen06g023830 Solanum pennellii HOM05D005065 ORTHO05D005944 4.3e-12 75.9 192 36.5
Lalb_Chr21g0305721 Lupinus albus HOM05D005065 ORTHO05D005944 5.6e-12 75.5 197 33.0
Oeu017883.1 Olea europaea HOM05D005065 ORTHO05D005944 5.6e-12 75.5 147 34.7
Prupe.8G058900 Prunus persica HOM05D005065 ORTHO05D005944 5.6e-12 75.5 170 33.5
Thecc.08G184600 Theobroma cacao HOM05D005065 ORTHO05D005944 7.3e-12 75.1 165 37.0
CiPaw.08G058800 Carya illinoinensis HOM05D005065 ORTHO05D005944 9.6e-12 74.7 224 31.2
Dinv41716 Davidia involucrata HOM05D005065 ORTHO05D005944 9.6e-12 74.7 160 37.5
Dinv15081 Davidia involucrata HOM05D005065 ORTHO05D005944 1.2e-11 74.3 206 35.0
Migut.C01259 Erythranthe guttata HOM05D005065 ORTHO05D005944 2.1e-11 73.6 185 33.0
Cc00_g13630 Coffea canephora HOM05D005065 ORTHO05D005944 3.6e-11 72.8 215 35.8
DCAR_011533 Daucus carota HOM05D005065 ORTHO05D005944 3.6e-11 72.8 186 34.9
Potri.019G082866 Populus trichocarpa HOM05D005065 ORTHO05D005944 3.6e-11 72.8 163 33.7
Peaxi162Scf00268g00105 Petunia axillaris HOM05D005065 ORTHO05D005944 4.7e-11 72.4 211 32.2
MSTRG.25443 Avicennia marina HOM05D005065 ORTHO05D005944 1.4e-10 70.9 153 34.0
ClCG11G008090 Citrullus lanatus HOM05D005065 ORTHO05D005944 1.4e-10 70.9 159 33.3
Rhsim06G0094100 Rhododendron simsii HOM05D005065 ORTHO05D005944 1.4e-10 70.9 174 40.8
TAR624G0039 Trochodendron aralioides HOM05D005065 ORTHO05D005944 1.4e-10 70.9 158 32.3
Lj5g0001381 Lotus japonicus HOM05D005065 ORTHO05D005944 1.8e-10 70.5 211 38.9
Lalb_Chr02g0141751 Lupinus albus HOM05D005065 ORTHO05D005944 2.4e-10 70.1 156 34.0
Lalb_Chr03g0036131 Lupinus albus HOM05D005065 ORTHO05D005944 2.4e-10 70.1 204 32.8
Cpa.g.sc66.33 Carica papaya HOM05D005065 ORTHO05D005944 5.2e-10 68.9 220 30.9
Glyma.20G174600 Glycine max HOM05D005065 ORTHO05D005944 5.2e-10 68.9 161 34.8
Eucgr.F02608 Eucalyptus grandis HOM05D005065 ORTHO05D005944 6.9e-10 68.6 169 32.0
Actinidia23336 Actinidia chinensis HOM05D005065 ORTHO05D005944 1.2e-09 67.8 152 32.9
Manes.02G192500 Manihot esculenta HOM05D005065 ORTHO05D005944 1.2e-09 67.8 176 33.0
CSS0016137 Camellia sinensis var. sinensis HOM05D005065 ORTHO05D005944 1.5e-09 67.4 149 35.6
MELO3C008125.2 Cucumis melo HOM05D005065 ORTHO05D005944 1.5e-09 67.4 159 32.7
Lalb_Chr06g0162001 Lupinus albus HOM05D005065 ORTHO05D005944 1.5e-09 67.4 191 33.0
SalBow7G0321 Salvia bowleyana HOM05D005065 ORTHO05D005944 1.5e-09 67.4 152 32.2
Actinidia02576 Actinidia chinensis HOM05D005065 ORTHO05D005944 2.0e-09 67.0 170 32.9
PGSC0003DMG400014033 Solanum tuberosum HOM05D005065 ORTHO05D005944 2.0e-09 67.0 173 34.1
MSTRG.22454 Avicennia marina HOM05D005065 ORTHO05D005944 2.6e-09 66.6 200 34.5
Ciclev10002433m.g Citrus clementina HOM05D005065 ORTHO05D005944 3.4e-09 66.2 157 32.5
PGR042G0986 Punica granatum HOM05D005065 ORTHO05D005944 3.4e-09 66.2 150 32.0
Lalb_Chr19g0129461 Lupinus albus HOM05D005065 ORTHO05D005944 4.4e-09 65.9 192 38.0
Atru.chr13.1737 Acer truncatum HOM05D005065 ORTHO05D005944 5.8e-09 65.5 169 31.4
A07p30470 Brassica napus HOM05D005065 ORTHO05D005944 9.9e-09 64.7 179 34.1
BraA07t30683Z Brassica rapa HOM05D005065 ORTHO05D005944 9.9e-09 64.7 179 34.1
Peaxi162Scf01013g00001 Petunia axillaris HOM05D005065 ORTHO05D005944 1.3e-08 64.3 209 29.2
Solyc11g018710.1 Solanum lycopersicum HOM05D005065 ORTHO05D005944 1.3e-08 64.3 171 32.7
Sopen11g009740 Solanum pennellii HOM05D005065 ORTHO05D005944 1.3e-08 64.3 171 32.7
SGA_v2.0_scaffold24G10554 Striga asiatica HOM05D005065 ORTHO05D005944 1.3e-08 64.3 171 41.5
Hma1.2p1_0937F.1_g239030 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 1.7e-08 63.9 192 31.2
MSTRG.1526 Avicennia marina HOM05D005065 ORTHO05D005944 2.2e-08 63.5 200 32.5
Sed0021334 Sechium edule HOM05D005065 ORTHO05D005944 2.2e-08 63.5 166 34.9
TWI60G1480 Tripterygium wilfordii HOM05D005065 ORTHO05D005944 2.2e-08 63.5 199 33.7
FAN15G3279 Fragaria x ananassa HOM05D005065 ORTHO05D005944 3.8e-08 62.8 190 32.1
MD05G1042300 Malus domestica HOM05D005065 ORTHO05D005944 1.9e-07 60.5 222 30.6
BcaB03g14918 Brassica carinata HOM05D005065 ORTHO05D005944 2.4e-07 60.1 194 32.0
Gorai.006G130800 Gossypium raimondii HOM05D005065 ORTHO05D005944 2.4e-07 60.1 185 39.5
Hma1.2p1_0060F.1_g032900 Hydrangea macrophylla HOM05D005065 ORTHO05D005944 2.4e-07 60.1 216 30.1
Gohir.D09G113300 Gossypium hirsutum HOM05D005065 ORTHO05D005944 4.2e-07 59.3 181 39.2
HanXRQChr05g0150531 Helianthus annuus HOM05D005065 ORTHO05D005944 7.1e-07 58.5 177 33.3
Rhsim11G0058500 Rhododendron simsii HOM05D005065 ORTHO05D005944 7.1e-07 58.5 149 30.9
Lalb_Chr01g0010191 Lupinus albus HOM05D005065 ORTHO05D005944 9.3e-07 58.2 193 31.1
Sabra13G0095100 Salix brachista HOM05D005065 ORTHO05D005944 9.3e-07 58.2 182 31.9
Eucgr.F04121 Eucalyptus grandis HOM05D005065 ORTHO05D005944 1.2e-06 57.8 160 31.9
Gohir.A09G116200 Gossypium hirsutum HOM05D005065 ORTHO05D005944 1.6e-06 57.4 179 39.1
Sc23g0001280 Simmondsia chinensis HOM05D005065 ORTHO05D005944 1.6e-06 57.4 143 33.6
CDE06G2798 Ceratophyllum demersum HOM05D005065 ORTHO05D005944 3.5e-06 56.2 143 33.6
A02p17610 Brassica napus HOM05D005065 ORTHO05D005944 4.6e-06 55.8 172 34.3
BraA02t06807Z Brassica rapa HOM05D005065 ORTHO05D005944 4.6e-06 55.8 172 34.3
RcHm_v2.0_Chr6g0270871 Rosa chinensis HOM05D005065 ORTHO05D005944 4.6e-06 55.8 149 34.2
Carub.0001s2220 Capsella rubella HOM05D005065 ORTHO05D005944 7.8e-06 55.1 196 31.1
MBI09_g14012_MAGBIO Magnolia biondii HOM05D005065 ORTHO05D005944 7.8e-06 55.1 184 33.2


User provided reference genes

Program Settings