Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0820G007 Amborella trichopoda HOM05D005298 ORTHO05D023441 4.3e-36 154.1 75 100.0
ATR0605G314 Amborella trichopoda HOM05D005298 ORTHO05D023441 5.3e-18 94.0 67 74.6
ATR0757G088 Amborella trichopoda HOM05D005298 ORTHO05D023441 5.3e-18 94.0 66 74.2
ATR0457G001 Amborella trichopoda HOM05D005298 ORTHO05D023441 6.5e-16 87.0 67 68.7
ATR0796G315 Amborella trichopoda HOM05D005298 ORTHO05D008015 1.2e-14 82.8 67 65.7
MBI18_g28901_MAGBIO Magnolia biondii HOM05D005298 ORTHO05D008015 1.6e-09 65.9 79 46.8
MD15G1386700 Malus domestica HOM05D005298 ORTHO05D008015 1.5e-07 59.3 79 44.3
MD16G1139700 Malus domestica HOM05D005298 ORTHO05D008015 1.5e-07 59.3 79 44.3
Nn3g21868 Nelumbo nucifera HOM05D005298 ORTHO05D008015 2.5e-07 58.5 68 50.0
TAR362G0426 Trochodendron aralioides HOM05D005298 ORTHO05D008015 2.5e-07 58.5 67 46.3
Rhsim04G0246500 Rhododendron simsii HOM05D005298 ORTHO05D008015 3.2e-07 58.2 67 44.8
FAN07G1807 Fragaria x ananassa HOM05D005298 ORTHO05D008015 7.2e-07 57.0 65 47.7
Aqoxy2G02567 Aquilegia oxysepala HOM05D005298 ORTHO05D008015 9.4e-07 56.6 66 50.0
FvH4_4g21110 Fragaria vesca HOM05D005298 ORTHO05D008015 9.4e-07 56.6 77 41.6
FAN17G0175 Fragaria x ananassa HOM05D005298 ORTHO05D008015 1.2e-06 56.2 65 46.2
Hma1.2p1_0013F.1_g008000 Hydrangea macrophylla HOM05D005298 ORTHO05D008015 1.6e-06 55.8 67 46.3
Manes.15G003700 Manihot esculenta HOM05D005298 ORTHO05D008015 2.1e-06 55.5 67 46.3
Prupe.1G109100 Prunus persica HOM05D005298 ORTHO05D008015 2.7e-06 55.1 64 48.4
Thecc.04G309800 Theobroma cacao HOM05D005298 ORTHO05D008015 2.7e-06 55.1 67 43.3
CSS0017624 Camellia sinensis var. sinensis HOM05D005298 ORTHO05D008015 4.7e-06 54.3 67 41.8
CSS0040584 Camellia sinensis var. sinensis HOM05D005298 ORTHO05D008015 4.7e-06 54.3 67 41.8
QL06p013696 Quercus lobata HOM05D005298 ORTHO05D008015 6.1e-06 53.9 67 44.8
ClCG06G004280 Citrullus lanatus HOM05D005298 ORTHO05D008015 8.0e-06 53.5 67 44.8
Lj4g0022536 Lotus japonicus HOM05D005298 ORTHO05D008015 8.0e-06 53.5 67 46.3
Medtr4g123670 Medicago truncatula HOM05D005298 ORTHO05D008015 8.0e-06 53.5 67 41.8
Potri.010G152700 Populus trichocarpa HOM05D005298 ORTHO05D008015 8.0e-06 53.5 67 43.3


User provided reference genes

Program Settings