Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0820G003 Amborella trichopoda HOM05D005926 ORTHO05D007001 0.0e+00 1406.3 937 100.0
TAR623G1319 Trochodendron aralioides HOM05D005926 ORTHO05D007001 3.1e-38 164.9 625 30.1
Actinidia18581 Actinidia chinensis HOM05D005926 ORTHO05D007001 1.3e-36 159.5 563 30.7
QL04p042256 Quercus lobata HOM05D005926 ORTHO05D007001 5.4e-35 154.1 593 28.8
Ciclev10030805m.g Citrus clementina HOM05D005926 ORTHO05D007001 1.6e-34 152.5 586 30.5
Rhsim03G0105700 Rhododendron simsii HOM05D005926 ORTHO05D007001 1.6e-34 152.5 597 30.8
Aqoxy2G01361 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 3.5e-34 151.4 590 28.5
Lj2C28T9 Lonicera japonica HOM05D005926 ORTHO05D007001 1.7e-33 149.1 568 31.2
Nn2g14047 Nelumbo nucifera HOM05D005926 ORTHO05D007001 1.7e-33 149.1 583 29.3
Aqoxy4G02869 Aquilegia oxysepala HOM05D005926 ORTHO05D007001 2.3e-33 148.7 597 30.7
ClCG08G008140 Citrullus lanatus HOM05D005926 ORTHO05D007001 5.6e-32 144.1 590 30.0
CsaV3_6G004110 Cucumis sativus L. HOM05D005926 ORTHO05D007001 1.3e-31 142.9 586 29.7
CSS0031564 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 2.1e-31 142.1 599 28.5
Duzib128G1763 Durio zibethinus HOM05D005926 ORTHO05D007001 6.2e-31 140.6 362 35.4
Glyma.10G202600 Glycine max HOM05D005926 ORTHO05D007001 1.1e-30 139.8 352 33.8
Manes.07G090100 Manihot esculenta HOM05D005926 ORTHO05D007001 1.4e-30 139.4 364 37.4
Nn6g35019 Nelumbo nucifera HOM05D005926 ORTHO05D007001 3.1e-30 138.3 610 27.7
Phvul.007G104500 Phaseolus vulgaris HOM05D005926 ORTHO05D007001 5.3e-30 137.5 565 27.8
vmacro07227 Vaccinium macrocarpon HOM05D005926 ORTHO05D007001 2.0e-29 135.6 586 29.9
Dinv30648 Davidia involucrata HOM05D005926 ORTHO05D007001 2.6e-29 135.2 396 35.1
COL.COLO4_06813 Corchorus olitorius HOM05D005926 ORTHO05D007001 4.5e-29 134.4 351 33.0
Gorai.012G020100 Gossypium raimondii HOM05D005926 ORTHO05D007001 9.9e-29 133.3 361 35.2
Sabra10G0182600 Salix brachista HOM05D005926 ORTHO05D007001 9.9e-29 133.3 363 35.0
TAR636G3019 Trochodendron aralioides HOM05D005926 ORTHO05D007001 1.7e-28 132.5 502 30.9
Hma1.2p1_0010F.1_g007030 Hydrangea macrophylla HOM05D005926 ORTHO05D007001 2.2e-28 132.1 361 35.2
Gohir.A05G398500 Gossypium hirsutum HOM05D005926 ORTHO05D007001 3.8e-28 131.3 361 35.2
Lj5g0002236 Lotus japonicus HOM05D005926 ORTHO05D007001 3.8e-28 131.3 589 28.4
CANSAT56G4130 Cannabis sativa HOM05D005926 ORTHO05D007001 4.9e-28 131.0 590 28.8
Gohir.D04G017400 Gossypium hirsutum HOM05D005926 ORTHO05D007001 4.9e-28 131.0 361 34.9
Migut.F00893 Erythranthe guttata HOM05D005926 ORTHO05D007001 8.4e-28 130.2 568 28.3
Thecc.10G111000 Theobroma cacao HOM05D005926 ORTHO05D007001 8.4e-28 130.2 609 27.8
TWI63G0673 Tripterygium wilfordii HOM05D005926 ORTHO05D007001 1.4e-27 129.4 562 28.6
Atru.chr12.975 Acer truncatum HOM05D005926 ORTHO05D007001 1.9e-27 129.0 591 28.6
Haze_02593 Corylus avellana HOM05D005926 ORTHO05D007001 1.9e-27 129.0 335 34.0
MELO3C019887.2 Cucumis melo HOM05D005926 ORTHO05D007001 3.2e-27 128.3 604 27.8
Eucgr.G02709 Eucalyptus grandis HOM05D005926 ORTHO05D007001 3.2e-27 128.3 376 32.4
Glyma.20G187800 Glycine max HOM05D005926 ORTHO05D007001 1.6e-26 125.9 589 27.7
CSS0031315 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 3.5e-26 124.8 580 28.8
SGA_v2.0_scaffold62G21348 Striga asiatica HOM05D005926 ORTHO05D007001 3.5e-26 124.8 529 28.0
Nitab4.5_0001027g0040 Nicotiana tabacum HOM05D005926 ORTHO05D007001 1.0e-25 123.2 351 32.2
Nitab4.5_0003396g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 1.0e-25 123.2 574 26.3
Medtr1g492840 Medicago truncatula HOM05D005926 ORTHO05D007001 2.3e-25 122.1 367 32.2
TAR369G1114 Trochodendron aralioides HOM05D005926 ORTHO05D007001 2.3e-25 122.1 379 35.1
GSVIVG01034734001 Vitis vinifera HOM05D005926 ORTHO05D007001 3.9e-25 121.3 381 31.2
Duzib106G0448 Durio zibethinus HOM05D005926 ORTHO05D007001 5.1e-25 120.9 366 33.6
RcHm_v2.0_Chr1g0333121 Rosa chinensis HOM05D005926 ORTHO05D007001 5.1e-25 120.9 610 26.1
EL10Ac4g08669 Beta vulgaris HOM05D005926 ORTHO05D007001 6.7e-25 120.6 569 26.7
MD07G1068100 Malus domestica HOM05D005926 ORTHO05D007001 6.7e-25 120.6 595 27.6
CSS0037332 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 1.5e-24 119.4 336 32.7
CiPaw.14G029200 Carya illinoinensis HOM05D005926 ORTHO05D007001 3.3e-24 118.2 635 25.5
PGR142G4330 Punica granatum HOM05D005926 ORTHO05D007001 3.3e-24 118.2 572 27.8
Ca_10497_v3 Cicer arietinum L. HOM05D005926 ORTHO05D007001 4.3e-24 117.9 574 27.2
MD02G1248000 Malus domestica HOM05D005926 ORTHO05D007001 5.6e-24 117.5 385 30.6
SalBow6G1645 Salvia bowleyana HOM05D005926 ORTHO05D007001 5.6e-24 117.5 569 28.5
TPR.G2562 Trifolium pratense HOM05D005926 ORTHO05D007001 7.4e-24 117.1 363 31.7
FAN03G1852 Fragaria x ananassa HOM05D005926 ORTHO05D007001 1.3e-23 116.3 367 32.2
Lalb_Chr03g0036371 Lupinus albus HOM05D005926 ORTHO05D007001 1.6e-23 115.9 614 27.2
Potri.008G025000 Populus trichocarpa HOM05D005926 ORTHO05D007001 1.6e-23 115.9 389 33.4
Prupe.2G085400 Prunus persica HOM05D005926 ORTHO05D007001 2.8e-23 115.2 585 27.7
AUR62041545 Chenopodium quinoa HOM05D005926 ORTHO05D007001 3.6e-23 114.8 566 26.0
Peaxi162Scf00004g00119 Petunia axillaris HOM05D005926 ORTHO05D007001 6.2e-23 114.0 582 26.6
Sed0009709 Sechium edule HOM05D005926 ORTHO05D007001 6.2e-23 114.0 555 28.6
Cc02_g10060 Coffea canephora HOM05D005926 ORTHO05D007001 8.1e-23 113.6 588 26.5
FvH4_7g05860 Fragaria vesca HOM05D005926 ORTHO05D007001 2.4e-22 112.1 393 31.0
PSO384G0761 Papaver somniferum HOM05D005926 ORTHO05D007001 2.4e-22 112.1 347 31.1
Sc06g0002210 Simmondsia chinensis HOM05D005926 ORTHO05D007001 5.3e-22 110.9 528 27.5
ECA232G4290 Erigeron canadensis HOM05D005926 ORTHO05D007001 6.9e-22 110.5 522 28.9
FAN10G2760 Fragaria x ananassa HOM05D005926 ORTHO05D007001 9.0e-22 110.2 592 26.4
Sabra08G0016800 Salix brachista HOM05D005926 ORTHO05D007001 9.0e-22 110.2 364 32.7
Cpa.g.sc19.23 Carica papaya HOM05D005926 ORTHO05D007001 4.5e-21 107.8 360 31.1
Psat6g176680 Pisum sativum HOM05D005926 ORTHO05D007001 4.5e-21 107.8 589 27.0
arahy.Tifrunner.gnm1.ann1.J9ASUV Arachis hypogaea HOM05D005926 ORTHO05D007001 7.6e-21 107.1 383 30.8
DCAR_014349 Daucus carota HOM05D005926 ORTHO05D007001 7.6e-21 107.1 562 26.9
PGSC0003DMG400023487 Solanum tuberosum HOM05D005926 ORTHO05D007001 7.6e-21 107.1 577 27.4
Sopen05g033810 Solanum pennellii HOM05D005926 ORTHO05D007001 9.9e-21 106.7 572 26.9
CSS0015422 Camellia sinensis var. sinensis HOM05D005926 ORTHO05D007001 1.7e-20 105.9 343 31.5
PSO339G4155 Papaver somniferum HOM05D005926 ORTHO05D007001 2.2e-20 105.5 570 25.4
Ah.04g163700 Amaranthus hybridus HOM05D005926 ORTHO05D007001 6.4e-20 104.0 567 24.9
Nitab4.5_0012334g0010 Nicotiana tabacum HOM05D005926 ORTHO05D007001 1.1e-19 103.2 361 31.9
SEGI_23583 Sequoiadendron giganteum HOM05D005926 ORTHO05D007001 1.1e-19 103.2 384 27.1
HanXRQChr05g0147041 Helianthus annuus HOM05D005926 ORTHO05D007001 1.4e-19 102.8 529 27.4
Nitab4.5_0002878g0030 Nicotiana tabacum HOM05D005926 ORTHO05D007001 3.2e-19 101.7 359 31.5
CAN.G1550.12 Capsicum annuum HOM05D005926 ORTHO05D007001 7.1e-19 100.5 561 27.1
PGSC0003DMG400027309 Solanum tuberosum HOM05D005926 ORTHO05D007001 2.1e-18 99.0 372 30.4
Os05g0445800 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 1.0e-17 96.7 331 27.5
Solyc05g055360.4 Solanum lycopersicum HOM05D005926 ORTHO05D007001 1.0e-17 96.7 579 26.3
Solyc11g007510.2 Solanum lycopersicum HOM05D005926 ORTHO05D007001 1.3e-17 96.3 372 30.1
Sopen11g003350 Solanum pennellii HOM05D005926 ORTHO05D007001 2.3e-17 95.5 375 28.8
THA.LOC104814724 Tarenaya hassleriana HOM05D005926 ORTHO05D007001 3.0e-17 95.1 207 36.2
Lsat_1_v5_gn_6_90261 Lactuca sativa HOM05D005926 ORTHO05D007001 3.9e-17 94.7 583 25.4
PSO443G0029 Papaver somniferum HOM05D005926 ORTHO05D007001 1.1e-16 93.2 356 30.3
C08p27480 Brassica napus HOM05D005926 ORTHO05D007001 1.5e-16 92.8 587 25.6
BolC8t50365H Brassica oleracea HOM05D005926 ORTHO05D007001 1.5e-16 92.8 587 25.6
VMungo0720G0267 Vigna mungo HOM05D005926 ORTHO05D007001 4.3e-16 91.3 546 23.8
BraA09t39993Z Brassica rapa HOM05D005926 ORTHO05D007001 5.6e-16 90.9 566 25.1
A09p45300 Brassica napus HOM05D005926 ORTHO05D007001 7.4e-16 90.5 584 25.2
Actinidia28534 Actinidia chinensis HOM05D005926 ORTHO05D007001 2.8e-15 88.6 658 23.9
CARHR161990 Cardamine hirsuta HOM05D005926 ORTHO05D007001 4.8e-15 87.8 576 24.1
Os05g0446500 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 1.8e-14 85.9 340 26.8
Zm00001eb147390 Zea mays HOM05D005926 ORTHO05D007001 9.0e-14 83.6 328 28.7
HPP92_002057 Vanilla planifolia HOM05D005926 ORTHO05D007001 2.6e-13 82.0 219 32.4
Aa31LG10G7340 Aethionema arabicum HOM05D005926 ORTHO05D007001 5.8e-13 80.9 554 25.3
Thhalv10010215m.g Eutrema salsugineum HOM05D005926 ORTHO05D007001 1.0e-12 80.1 557 23.9
CDE04G2986 Ceratophyllum demersum HOM05D005926 ORTHO05D007001 2.2e-12 79.0 355 28.2
Zm00001eb289020 Zea mays HOM05D005926 ORTHO05D007001 2.2e-12 79.0 384 27.9
A04p07120 Brassica napus HOM05D005926 ORTHO05D007001 8.4e-12 77.0 588 23.8
BcaB02g08582 Brassica carinata HOM05D005926 ORTHO05D007001 1.4e-11 76.3 574 22.6
Carub.0005s1860 Capsella rubella HOM05D005926 ORTHO05D007001 1.4e-11 76.3 579 24.5
unitig_0.g760 Utricularia gibba HOM05D005926 ORTHO05D007001 1.9e-11 75.9 227 35.2
BcaC07g39594 Brassica carinata HOM05D005926 ORTHO05D007001 3.2e-11 75.1 575 24.5
BraA04t16409Z Brassica rapa HOM05D005926 ORTHO05D007001 4.2e-11 74.7 589 24.8
Sed0000046 Sechium edule HOM05D005926 ORTHO05D007001 7.1e-11 73.9 518 25.5
Sp5g10020 Schrenkiella parvula HOM05D005926 ORTHO05D007001 9.3e-11 73.6 571 23.1
AL5G32830 Arabidopsis lyrata HOM05D005926 ORTHO05D007001 1.6e-10 72.8 588 25.0
BcaC02g09269 Brassica carinata HOM05D005926 ORTHO05D007001 1.6e-10 72.8 580 25.5
BolC4t25653H Brassica oleracea HOM05D005926 ORTHO05D007001 7.9e-10 70.5 566 25.1
Os04g0646050 Oryza sativa ssp. japonica HOM05D005926 ORTHO05D007001 5.1e-09 67.8 152 38.2
AagrBONN_evm.TU.Sc2ySwM_228.4811 Anthoceros agrestis HOM05D005926 ORTHO05D007001 6.7e-09 67.4 262 32.1
AT3G52240 Arabidopsis thaliana HOM05D005926 ORTHO05D007001 2.5e-08 65.5 590 23.9
C04p40700 Brassica napus HOM05D005926 ORTHO05D007001 6.3e-07 60.8 131 41.2
GSVIVG01031385001 Vitis vinifera HOM05D005926 ORTHO05D007001 4.1e-06 58.2 93 47.3
arahy.Tifrunner.gnm1.ann1.9BC44J Arachis hypogaea HOM05D005926 ORTHO05D007001 6.9e-06 57.4 308 26.0


User provided reference genes

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