Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0815G056 Amborella trichopoda HOM05D008288 ORTHO05D010469 4.7e-154 548.1 341 100.0
QL02p022482 Quercus lobata HOM05D008288 ORTHO05D010469 3.4e-43 179.9 271 43.9
TAR625G1133 Trochodendron aralioides HOM05D008288 ORTHO05D010469 3.4e-43 179.9 270 42.6
PGR031G1353 Punica granatum HOM05D008288 ORTHO05D010469 2.8e-42 176.8 273 41.8
MBI04_g10412_MAGBIO Magnolia biondii HOM05D008288 ORTHO05D010469 3.7e-42 176.4 274 43.1
Peaxi162Scf00341g00011 Petunia axillaris HOM05D008288 ORTHO05D010469 4.9e-42 176.0 274 41.6
Hma1.2p1_0000F.1_g000730 Hydrangea macrophylla HOM05D008288 ORTHO05D010469 6.3e-42 175.6 293 38.6
CSS0049569 Camellia sinensis var. sinensis HOM05D008288 ORTHO05D010469 9.2e-41 171.8 271 40.6
Sopen08g021110 Solanum pennellii HOM05D008288 ORTHO05D010469 9.2e-41 171.8 275 39.6
Aqoxy7G02071 Aquilegia oxysepala HOM05D008288 ORTHO05D010469 1.2e-40 171.4 274 42.3
CAN.G348.1 Capsicum annuum HOM05D008288 ORTHO05D010469 4.5e-40 169.5 275 40.4
Nitab4.5_0015147g0010 Nicotiana tabacum HOM05D008288 ORTHO05D010469 5.9e-40 169.1 275 40.4
PSO455G0067 Papaver somniferum HOM05D008288 ORTHO05D010469 5.9e-40 169.1 274 39.8
Potri.006G251000 Populus trichocarpa HOM05D008288 ORTHO05D010469 5.9e-40 169.1 275 40.7
Solyc08g067170.3 Solanum lycopersicum HOM05D008288 ORTHO05D010469 5.9e-40 169.1 275 40.0
Thecc.09G149300 Theobroma cacao HOM05D008288 ORTHO05D010469 1.3e-39 167.9 274 40.1
Actinidia22367 Actinidia chinensis HOM05D008288 ORTHO05D010469 2.3e-39 167.2 283 38.5
COL.COLO4_23981 Corchorus olitorius HOM05D008288 ORTHO05D010469 3.8e-39 166.4 275 40.4
Gohir.D05G048766 Gossypium hirsutum HOM05D008288 ORTHO05D010469 3.8e-39 166.4 272 40.8
Gorai.009G050100 Gossypium raimondii HOM05D008288 ORTHO05D010469 5.0e-39 166.0 275 40.4
Gohir.A05G047000 Gossypium hirsutum HOM05D008288 ORTHO05D010469 1.1e-38 164.9 275 40.4
TWI34G1005 Tripterygium wilfordii HOM05D008288 ORTHO05D010469 2.5e-38 163.7 278 40.3
Ciclev10010324m.g Citrus clementina HOM05D008288 ORTHO05D010469 5.6e-38 162.5 287 38.3
PSO170G5425 Papaver somniferum HOM05D008288 ORTHO05D010469 9.5e-38 161.8 274 40.1
Atru.chr7.2381 Acer truncatum HOM05D008288 ORTHO05D010469 1.6e-37 161.0 271 40.6
MD15G1120900 Malus domestica HOM05D008288 ORTHO05D010469 2.1e-37 160.6 274 39.1
RcHm_v2.0_Chr6g0298581 Rosa chinensis HOM05D008288 ORTHO05D010469 2.1e-37 160.6 269 40.1
Nitab4.5_0000151g0060 Nicotiana tabacum HOM05D008288 ORTHO05D010469 2.8e-37 160.2 259 40.9
FvH4_2g29591 Fragaria vesca HOM05D008288 ORTHO05D010469 1.0e-36 158.3 274 39.8
Duzib150G0406 Durio zibethinus HOM05D008288 ORTHO05D010469 3.0e-36 156.8 271 39.9
FAN15G2470 Fragaria x ananassa HOM05D008288 ORTHO05D010469 5.2e-36 156.0 274 39.1
Cpa.g.sc91.46 Carica papaya HOM05D008288 ORTHO05D010469 2.0e-35 154.1 264 40.2
FAN27G1450 Fragaria x ananassa HOM05D008288 ORTHO05D010469 2.0e-35 154.1 274 39.1
Eucgr.C01784 Eucalyptus grandis HOM05D008288 ORTHO05D010469 4.4e-35 152.9 273 38.8
VMungo1309G1559 Vigna mungo HOM05D008288 ORTHO05D010469 5.7e-35 152.5 288 35.1
MD08G1145200 Malus domestica HOM05D008288 ORTHO05D010469 7.5e-35 152.1 274 38.3
DCAR_007695 Daucus carota HOM05D008288 ORTHO05D010469 2.2e-34 150.6 248 38.3
Migut.A00319 Erythranthe guttata HOM05D008288 ORTHO05D010469 2.2e-34 150.6 268 39.2
Phvul.009G095100 Phaseolus vulgaris HOM05D008288 ORTHO05D010469 4.9e-34 149.4 290 34.5
Prupe.1G473500 Prunus persica HOM05D008288 ORTHO05D010469 5.4e-33 146.0 269 38.7
Ca_15724_v3 Cicer arietinum L. HOM05D008288 ORTHO05D010469 3.5e-32 143.3 280 36.4
Medtr3g107650 Medicago truncatula HOM05D008288 ORTHO05D010469 3.5e-32 143.3 281 37.0
SalBow4G3001 Salvia bowleyana HOM05D008288 ORTHO05D010469 1.0e-31 141.7 264 36.4
CsaV3_3G046560 Cucumis sativus L. HOM05D008288 ORTHO05D010469 1.3e-31 141.4 268 37.7
Manes.16G119800 Manihot esculenta HOM05D008288 ORTHO05D010469 1.3e-31 141.4 267 45.3
Psat0ss3186g0240 Pisum sativum HOM05D008288 ORTHO05D010469 1.7e-31 141.0 280 35.7
Sed0020459 Sechium edule HOM05D008288 ORTHO05D010469 1.7e-31 141.0 303 35.3
TPR.G31773 Trifolium pratense HOM05D008288 ORTHO05D010469 5.0e-31 139.4 297 35.0
ClCG05G017080 Citrullus lanatus HOM05D008288 ORTHO05D010469 1.5e-30 137.9 303 35.6
Haze_21560 Corylus avellana HOM05D008288 ORTHO05D010469 6.8e-28 129.0 269 36.4
Glyma.04G068600 Glycine max HOM05D008288 ORTHO05D010469 3.4e-27 126.7 217 37.3
Lj1g0026401 Lotus japonicus HOM05D008288 ORTHO05D010469 5.8e-27 125.9 224 36.6
Dinv11620 Davidia involucrata HOM05D008288 ORTHO05D010469 1.4e-25 121.3 197 38.1
Lsat_1_v5_gn_1_45101 Lactuca sativa HOM05D008288 ORTHO05D010469 6.6e-23 112.5 184 41.3
MELO3C003683.2 Cucumis melo HOM05D008288 ORTHO05D010469 8.6e-23 112.1 156 42.9
CANSAT54G0155 Cannabis sativa HOM05D008288 ORTHO05D010469 4.3e-22 109.8 148 40.5
Dinv30173 Davidia involucrata HOM05D008288 ORTHO05D010469 2.8e-21 107.1 274 41.2
SEGI_16453 Sequoiadendron giganteum HOM05D008288 ORTHO05D010469 4.9e-18 96.3 273 39.2
Cfa013175 Carpinus fangiana HOM05D008288 ORTHO05D010469 4.1e-17 93.2 192 39.1
Pp3c24_15640 Physcomitrium patens HOM05D000215 ORTHO05D008904 1.1e-09 68.6 265 29.8
Eucgr.B00358 Eucalyptus grandis HOM05D000215 ORTHO05D003454 1.7e-07 61.2 146 30.8
Pp3c9_17040 Physcomitrium patens HOM05D000215 ORTHO05D008904 3.9e-07 60.1 135 31.1
Pp3c9_17047 Physcomitrium patens HOM05D000215 ORTHO05D008904 3.9e-07 60.1 135 31.1
Pp3c26_8290 Physcomitrium patens HOM05D006338 ORTHO05D007946 2.5e-06 57.4 279 26.9
VMungo1215G2056 Vigna mungo HOM05D000215 ORTHO05D003454 3.3e-06 57.0 272 25.4
VMungo1215G2548 Vigna mungo HOM05D000215 ORTHO05D003454 3.3e-06 57.0 156 30.1
Gohir.A10G239100 Gossypium hirsutum HOM05D000215 ORTHO05D008904 7.3e-06 55.8 233 35.2


User provided reference genes

Program Settings