Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0810G277 Amborella trichopoda HOM05D010257 ORTHO05D012299 3.3e-83 311.6 151 100.0
ATR0733G194 Amborella trichopoda HOM05D010257 ORTHO05D012299 5.7e-43 177.9 150 61.3
ATR0810G136 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.3e-42 176.8 150 60.0
ATR0810G144 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.8e-41 172.9 123 67.5
ATR0810G003 Amborella trichopoda HOM05D010257 ORTHO05D012299 3.4e-40 168.7 147 61.9
ATR0810G078 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.4e-38 163.3 128 63.3
ATR0810G098 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.6e-37 159.8 122 63.9
ATR0810G086 Amborella trichopoda HOM05D010257 ORTHO05D012299 2.1e-37 159.5 121 63.6
ATR0810G021 Amborella trichopoda HOM05D010257 ORTHO05D012299 4.6e-37 158.3 122 63.9
ATR0810G190 Amborella trichopoda HOM05D010257 ORTHO05D012299 5.7e-35 151.4 128 59.4
ATR0810G181 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.6e-34 149.8 149 55.7
ATR0810G251 Amborella trichopoda HOM05D010257 ORTHO05D012299 3.7e-34 148.7 106 67.9
ATR0810G131 Amborella trichopoda HOM05D010257 ORTHO05D012299 6.3e-34 147.9 149 55.0
ATR0810G123 Amborella trichopoda HOM05D010257 ORTHO05D012299 2.6e-32 142.5 123 58.5
ATR0810G252 Amborella trichopoda HOM05D010257 ORTHO05D012299 9.7e-27 124.0 106 55.7
ATR0810G203 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.3e-26 123.6 122 54.1
ATR0810G221 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.1e-22 110.5 79 68.4
ATR0810G126 Amborella trichopoda HOM05D010257 ORTHO05D012299 5.2e-20 101.7 143 44.8
ATR0810G072 Amborella trichopoda HOM05D010257 ORTHO05D012299 6.7e-20 101.3 88 56.8
ATR0716G045 Amborella trichopoda HOM05D010257 ORTHO05D012299 5.9e-16 88.2 86 52.3
ATR0810G092 Amborella trichopoda HOM05D010257 ORTHO05D012299 9.7e-11 70.9 58 65.5
Dinv14219 Davidia involucrata HOM05D000542 ORTHO05D000202 9.7e-11 70.9 147 34.0
Actinidia15724 Actinidia chinensis HOM05D000542 ORTHO05D000202 3.7e-10 68.9 143 30.8
COL.COLO4_18705 Corchorus olitorius HOM05D000542 ORTHO05D000202 8.2e-10 67.8 137 32.1
vmacro05355 Vaccinium macrocarpon HOM05D000542 ORTHO05D000202 1.1e-09 67.4 144 32.6
arahy.Tifrunner.gnm1.ann1.04D7UL Arachis hypogaea HOM05D000542 ORTHO05D000202 1.8e-09 66.6 125 32.8
Oeu027036.1 Olea europaea HOM05D000542 ORTHO05D000202 1.8e-09 66.6 148 31.8
Lsat_1_v5_gn_1_59360 Lactuca sativa HOM05D000542 ORTHO05D000202 5.3e-09 65.1 126 36.5
vmacro23259 Vaccinium macrocarpon HOM05D000542 ORTHO05D000202 1.2e-08 63.9 126 34.9
MELO3C003592.2 Cucumis melo HOM05D000542 ORTHO05D000202 2.0e-08 63.2 71 43.7
CSS0015194 Camellia sinensis var. sinensis HOM05D000542 ORTHO05D000202 2.7e-08 62.8 143 29.4
Actinidia14658 Actinidia chinensis HOM05D000542 ORTHO05D000202 3.5e-08 62.4 159 27.7
Atru.chr7.2289 Acer truncatum HOM05D000542 ORTHO05D000202 4.5e-08 62.0 136 32.4
Actinidia00510 Actinidia chinensis HOM05D000542 ORTHO05D000202 4.5e-08 62.0 75 40.0
vmacro05356 Vaccinium macrocarpon HOM05D000542 ORTHO05D000202 4.5e-08 62.0 71 46.5
CSS0020117 Camellia sinensis var. sinensis HOM05D000542 ORTHO05D000202 5.9e-08 61.6 68 45.6
Cc08_g08450 Coffea canephora HOM05D000542 ORTHO05D000202 5.9e-08 61.6 129 31.0
Lj1g0008771 Lotus japonicus HOM05D000542 ORTHO05D000202 7.7e-08 61.2 74 40.5
RcHm_v2.0_Chr5g0051031 Rosa chinensis HOM05D000542 ORTHO05D000202 7.7e-08 61.2 66 45.5
Hma1.2p1_0003F.1_g003730 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 1.0e-07 60.8 147 32.0
Rhsim11G0175000 Rhododendron simsii HOM05D000542 ORTHO05D000202 1.0e-07 60.8 119 30.3
CARHR187730 Cardamine hirsuta HOM05D000542 ORTHO05D000202 1.7e-07 60.1 133 32.3
Cc09_g09700 Coffea canephora HOM05D000542 ORTHO05D012299 2.2e-07 59.7 68 48.5
Psat6g034000 Pisum sativum HOM05D000542 ORTHO05D000202 2.2e-07 59.7 119 33.6
CiPaw.08G022900 Carya illinoinensis HOM05D000542 ORTHO05D000202 2.9e-07 59.3 69 40.6
MD05G1068000 Malus domestica HOM05D000542 ORTHO05D000202 2.9e-07 59.3 83 39.8
Os01g0733500 Oryza sativa ssp. japonica HOM05D000542 ORTHO05D000202 2.9e-07 59.3 73 42.5
PGR044G1623 Punica granatum HOM05D000542 ORTHO05D000202 2.9e-07 59.3 190 29.5
AUR62023032 Chenopodium quinoa HOM05D000542 ORTHO05D000202 3.8e-07 58.9 68 44.1
Cc00_g27510 Coffea canephora HOM05D000542 ORTHO05D000202 3.8e-07 58.9 68 48.5
FvH4_2g36250 Fragaria vesca HOM05D000542 ORTHO05D000202 3.8e-07 58.9 71 42.3
FAN15G1897 Fragaria x ananassa HOM05D000542 ORTHO05D000202 3.8e-07 58.9 71 42.3
FAN20G0120 Fragaria x ananassa HOM05D000542 ORTHO05D000202 3.8e-07 58.9 71 42.3
FAN27G2567 Fragaria x ananassa HOM05D000542 ORTHO05D000202 3.8e-07 58.9 71 42.3
TAR624G1414 Trochodendron aralioides HOM05D000542 ORTHO05D000202 3.8e-07 58.9 136 31.6
MSTRG.25897 Avicennia marina HOM05D000542 ORTHO05D000202 5.0e-07 58.5 71 45.1
Medtr3g109490 Medicago truncatula HOM05D000542 ORTHO05D000202 5.0e-07 58.5 142 31.7
Nitab4.5_0009466g0030 Nicotiana tabacum HOM05D000542 ORTHO05D000202 5.0e-07 58.5 70 41.4
Oeu014339.1 Olea europaea HOM05D000542 ORTHO05D000202 5.0e-07 58.5 68 44.1
TAR628G1303 Trochodendron aralioides HOM05D000542 ORTHO05D000202 5.0e-07 58.5 68 39.7
VMungo1309G2113 Vigna mungo HOM05D000542 ORTHO05D000202 5.0e-07 58.5 69 39.1
Hma1.2p1_0066F.1_g036520 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 6.5e-07 58.2 68 41.2
Hma1.2p1_0066F.1_g036565 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 6.5e-07 58.2 68 41.2
Hma1.2p1_0066F.1_g036585 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 6.5e-07 58.2 69 39.1
MD08G1119600 Malus domestica HOM05D000542 ORTHO05D000202 6.5e-07 58.2 71 40.8
Nitab4.5_0001794g0130 Nicotiana tabacum HOM05D000542 ORTHO05D000202 6.5e-07 58.2 70 41.4
Peaxi162Scf00110g00146 Petunia axillaris HOM05D000542 ORTHO05D000202 6.5e-07 58.2 69 37.7
Cpa.g.sc205.1 Carica papaya HOM05D000542 ORTHO05D000202 8.5e-07 57.8 89 36.0
Rhsim11G0175700 Rhododendron simsii HOM05D000542 ORTHO05D000202 8.5e-07 57.8 69 40.6
Sed0010077 Sechium edule HOM05D000542 ORTHO05D000202 8.5e-07 57.8 68 42.6
Hund03445 Selenicereus undatus HOM05D000542 ORTHO05D000202 8.5e-07 57.8 71 42.3
TAR628G0639 Trochodendron aralioides HOM05D000542 ORTHO05D000202 8.5e-07 57.8 68 39.7
Hma1.2p1_0450F.1_g155650 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 1.1e-06 57.4 149 31.5
Peaxi162Scf00276g00093 Petunia axillaris HOM05D000542 ORTHO05D000202 1.1e-06 57.4 126 31.7
AUR62009353 Chenopodium quinoa HOM05D000542 ORTHO05D000202 1.5e-06 57.0 68 42.6
Cc08_g08860 Coffea canephora HOM05D000542 ORTHO05D000202 1.5e-06 57.0 129 30.2
Peaxi162Scf00016g00087 Petunia axillaris HOM05D000542 ORTHO05D000202 1.5e-06 57.0 69 37.7
Atru.chr7.2290 Acer truncatum HOM05D000542 ORTHO05D000202 1.9e-06 56.6 166 27.1
Actinidia14657 Actinidia chinensis HOM05D000542 ORTHO05D000202 1.9e-06 56.6 68 42.6
arahy.Tifrunner.gnm1.ann1.39ZYJP Arachis hypogaea HOM05D000542 ORTHO05D000202 1.9e-06 56.6 167 29.3
CiPaw.06G136600 Carya illinoinensis HOM05D000542 ORTHO05D000202 1.9e-06 56.6 69 40.6
Cc06_g18690 Coffea canephora HOM05D000542 ORTHO05D000202 1.9e-06 56.6 68 47.1
Glyma.04G079600 Glycine max HOM05D000542 ORTHO05D000202 1.9e-06 56.6 71 43.7
MD15G1098800 Malus domestica HOM05D000542 ORTHO05D000202 1.9e-06 56.6 71 39.4
Manes.10G047800 Manihot esculenta HOM05D000542 ORTHO05D000202 1.9e-06 56.6 69 39.1
Prupe.4G257600 Prunus persica HOM05D000542 ORTHO05D000202 1.9e-06 56.6 161 29.8
Lalb_Chr24g0402641 Lupinus albus HOM05D000542 ORTHO05D000202 2.5e-06 56.2 140 32.1
Manes.17G100000 Manihot esculenta HOM05D000542 ORTHO05D000202 2.5e-06 56.2 73 38.4
Psat6g033960 Pisum sativum HOM05D000542 ORTHO05D000202 2.5e-06 56.2 71 40.8
TPR.G12129 Trifolium pratense HOM05D000542 ORTHO05D000202 2.5e-06 56.2 126 31.7
A06p03890 Brassica napus HOM05D000542 ORTHO05D000202 3.2e-06 55.8 69 37.7
BraA06t23598Z Brassica rapa HOM05D000542 ORTHO05D000202 3.2e-06 55.8 69 37.7
Ciclev10008742m.g Citrus clementina HOM05D000542 ORTHO05D000202 3.2e-06 55.8 68 42.6
CsaV3_3G047340 Cucumis sativus L. HOM05D002580 ORTHO05D002811 3.2e-06 55.8 71 42.3
MD08G1199500 Malus domestica HOM05D000542 ORTHO05D000202 3.2e-06 55.8 114 31.6
TWI32G1221 Tripterygium wilfordii HOM05D000542 ORTHO05D000202 3.2e-06 55.8 68 39.7
MSTRG.27704 Avicennia marina HOM05D000542 ORTHO05D000202 4.2e-06 55.5 71 38.0
ECA233G4799 Erigeron canadensis HOM05D000542 ORTHO05D000202 4.2e-06 55.5 136 30.9
Glyma.04G013500 Glycine max HOM05D000542 ORTHO05D000202 4.2e-06 55.5 69 40.6
Hma1.2p1_0066F.1_g036550 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 4.2e-06 55.5 69 37.7
Psat6g033920 Pisum sativum HOM05D000542 ORTHO05D000202 4.2e-06 55.5 151 27.2
Ah.16g105070 Amaranthus hybridus HOM05D000542 ORTHO05D000202 5.5e-06 55.1 103 36.9
CSS0026940 Camellia sinensis var. sinensis HOM05D000542 ORTHO05D000202 5.5e-06 55.1 100 33.0
Cc07_g14580 Coffea canephora HOM05D000542 ORTHO05D000202 5.5e-06 55.1 67 40.3
ECA248G3861 Erigeron canadensis HOM05D000542 ORTHO05D000202 5.5e-06 55.1 66 43.9
Manes.03G128100 Manihot esculenta HOM05D000542 ORTHO05D000202 5.5e-06 55.1 153 32.7
SGA_v2.0_scaffold243G44299 Striga asiatica HOM05D000542 ORTHO05D000202 5.5e-06 55.1 71 43.7
vmacro17187 Vaccinium macrocarpon HOM05D000542 ORTHO05D000202 5.5e-06 55.1 69 37.7
Actinidia12835 Actinidia chinensis HOM05D000542 ORTHO05D000202 7.2e-06 54.7 68 41.2
Actinidia14660 Actinidia chinensis HOM05D000542 ORTHO05D000202 7.2e-06 54.7 68 41.2
arahy.Tifrunner.gnm1.ann1.NG4XB7 Arachis hypogaea HOM05D000542 ORTHO05D000202 7.2e-06 54.7 91 36.3
EL10Ac9g21745 Beta vulgaris HOM05D000542 ORTHO05D000202 7.2e-06 54.7 75 38.7
BcaC08g43130 Brassica carinata HOM05D000542 ORTHO05D000202 7.2e-06 54.7 69 37.7
C06p04050 Brassica napus HOM05D000542 ORTHO05D000202 7.2e-06 54.7 69 37.7
BolC6t35537H Brassica oleracea HOM05D000542 ORTHO05D000202 7.2e-06 54.7 69 37.7
ClCG02G005150 Citrullus lanatus HOM05D000542 ORTHO05D000202 7.2e-06 54.7 68 38.2
Migut.A00237 Erythranthe guttata HOM05D000542 ORTHO05D000202 7.2e-06 54.7 71 43.7
Eucgr.C02887 Eucalyptus grandis HOM05D000542 ORTHO05D000202 7.2e-06 54.7 71 42.3
Lsat_1_v5_gn_1_49041 Lactuca sativa HOM05D000542 ORTHO05D000202 7.2e-06 54.7 66 45.5
QL12p026208 Quercus lobata HOM05D000542 ORTHO05D000202 7.2e-06 54.7 68 44.1
Rhsim11G0175500 Rhododendron simsii HOM05D000542 ORTHO05D000202 7.2e-06 54.7 69 39.1
Sabra09G0087700 Salix brachista HOM05D000542 ORTHO05D000202 7.2e-06 54.7 69 40.6
AL1G56190 Arabidopsis lyrata HOM05D000542 ORTHO05D000202 9.4e-06 54.3 62 38.7
Cfa005017 Carpinus fangiana HOM05D000542 ORTHO05D000202 9.4e-06 54.3 69 40.6
CiPaw.05G063100 Carya illinoinensis HOM05D000542 ORTHO05D000202 9.4e-06 54.3 69 39.1
CsaV3_2G014610 Cucumis sativus L. HOM05D000542 ORTHO05D000202 9.4e-06 54.3 109 31.2
Duzib052G0326 Durio zibethinus HOM05D000542 ORTHO05D000202 9.4e-06 54.3 69 39.1
FAN15G1534 Fragaria x ananassa HOM05D000542 ORTHO05D000202 9.4e-06 54.3 70 37.1
Manes.03G125551 Manihot esculenta HOM05D000542 ORTHO05D000202 9.4e-06 54.3 154 32.5
Rhsim11G0175300 Rhododendron simsii HOM05D000542 ORTHO05D000202 9.4e-06 54.3 69 39.1
SalBow6G5032 Salvia bowleyana HOM05D000542 ORTHO05D000202 9.4e-06 54.3 76 35.5
Hund19556 Selenicereus undatus HOM05D000542 ORTHO05D000202 9.4e-06 54.3 71 42.3
Sopen01g051690 Solanum pennellii HOM05D000542 ORTHO05D000202 9.4e-06 54.3 61 37.7


User provided reference genes

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