Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0810G252 Amborella trichopoda HOM05D010257 ORTHO05D012299 5.8e-94 347.4 162 100.0
ATR0810G144 Amborella trichopoda HOM05D010257 ORTHO05D012299 5.1e-50 201.4 120 79.2
ATR0810G136 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.7e-40 169.9 133 60.2
ATR0810G251 Amborella trichopoda HOM05D010257 ORTHO05D012299 2.8e-40 169.1 134 61.9
ATR0810G003 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.8e-39 166.4 143 58.0
ATR0810G098 Amborella trichopoda HOM05D010257 ORTHO05D012299 3.8e-37 158.7 136 58.1
ATR0733G194 Amborella trichopoda HOM05D010257 ORTHO05D012299 7.9e-35 151.0 147 50.3
ATR0810G123 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.0e-34 150.6 107 70.1
ATR0810G190 Amborella trichopoda HOM05D010257 ORTHO05D012299 3.7e-32 142.1 117 58.1
ATR0810G131 Amborella trichopoda HOM05D010257 ORTHO05D012299 3.1e-31 139.0 143 49.0
ATR0810G078 Amborella trichopoda HOM05D010257 ORTHO05D012299 5.0e-29 131.7 117 54.7
ATR0810G072 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.9e-28 129.8 121 51.2
ATR0810G086 Amborella trichopoda HOM05D010257 ORTHO05D012299 3.2e-28 129.0 128 52.3
ATR0810G277 Amborella trichopoda HOM05D010257 ORTHO05D012299 4.0e-26 122.1 106 55.7
ATR0810G021 Amborella trichopoda HOM05D010257 ORTHO05D012299 5.2e-26 121.7 104 57.7
ATR0810G203 Amborella trichopoda HOM05D010257 ORTHO05D012299 3.5e-22 109.0 100 55.0
ATR0810G075 Amborella trichopoda HOM05D010257 ORTHO05D012299 4.5e-22 108.6 89 62.9
ATR0810G181 Amborella trichopoda HOM05D010257 ORTHO05D012299 5.5e-20 101.7 160 37.5
ATR0810G126 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.2e-19 100.5 100 53.0
ATR0810G221 Amborella trichopoda HOM05D010257 ORTHO05D012299 4.0e-18 95.5 100 51.0
ATR0716G045 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.2e-14 84.0 95 46.3
ATR0810G092 Amborella trichopoda HOM05D010257 ORTHO05D012299 3.8e-13 79.0 58 72.4
AUR62023032 Chenopodium quinoa HOM05D000542 ORTHO05D000202 3.0e-10 69.3 110 36.4
Sabra09G0087700 Salix brachista HOM05D000542 ORTHO05D000202 4.0e-10 68.9 126 35.7
CiPaw.08G022900 Carya illinoinensis HOM05D000542 ORTHO05D000202 6.8e-10 68.2 138 33.3
Potri.009G114300 Populus trichocarpa HOM05D000542 ORTHO05D000202 8.8e-10 67.8 126 34.9
Hund23043 Selenicereus undatus HOM05D000542 ORTHO05D000202 2.0e-09 66.6 113 36.3
Ah.16g105070 Amaranthus hybridus HOM05D000542 ORTHO05D000202 2.6e-09 66.2 110 36.4
Potri.004G153100 Populus trichocarpa HOM05D000542 ORTHO05D000202 4.4e-09 65.5 125 35.2
Atru.chr5.2994 Acer truncatum HOM05D000542 ORTHO05D000202 5.7e-09 65.1 113 34.5
Glyma.04G013500 Glycine max HOM05D000542 ORTHO05D000202 5.7e-09 65.1 103 35.9
Duzib052G0326 Durio zibethinus HOM05D000542 ORTHO05D000202 7.5e-09 64.7 112 36.6
FAN15G1897 Fragaria x ananassa HOM05D000542 ORTHO05D000202 7.5e-09 64.7 113 37.2
Manes.10G047800 Manihot esculenta HOM05D000542 ORTHO05D000202 7.5e-09 64.7 108 34.3
Cc08_g08450 Coffea canephora HOM05D000542 ORTHO05D000202 1.3e-08 63.9 113 34.5
Gorai.012G152100 Gossypium raimondii HOM05D000542 ORTHO05D000202 1.3e-08 63.9 104 34.6
FAN15G1534 Fragaria x ananassa HOM05D000542 ORTHO05D000202 1.7e-08 63.5 113 32.7
Cpa.g.sc205.1 Carica papaya HOM05D000542 ORTHO05D000202 2.2e-08 63.2 131 32.8
Ciclev10028994m.g Citrus clementina HOM05D000542 ORTHO05D000202 2.2e-08 63.2 125 32.0
MBI16_g15414_MAGBIO Magnolia biondii HOM05D000542 ORTHO05D000202 2.2e-08 63.2 107 35.5
MD15G1098800 Malus domestica HOM05D000542 ORTHO05D000202 2.2e-08 63.2 113 35.4
Cc00_g24050 Coffea canephora HOM05D000542 ORTHO05D000202 2.8e-08 62.8 110 35.5
DCAR_004246 Daucus carota HOM05D000542 ORTHO05D000202 2.8e-08 62.8 110 36.4
FvH4_2g36250 Fragaria vesca HOM05D000542 ORTHO05D000202 2.8e-08 62.8 113 36.3
FAN27G2567 Fragaria x ananassa HOM05D000542 ORTHO05D000202 2.8e-08 62.8 113 36.3
vmacro22207 Vaccinium macrocarpon HOM05D000542 ORTHO05D000202 2.8e-08 62.8 146 33.6
vmacro23258 Vaccinium macrocarpon HOM05D000542 ORTHO05D000202 2.8e-08 62.8 146 33.6
MELO3C003592.2 Cucumis melo HOM05D000542 ORTHO05D000202 3.7e-08 62.4 113 31.9
MSTRG.25897 Avicennia marina HOM05D000542 ORTHO05D000202 4.9e-08 62.0 113 34.5
Manes.17G100000 Manihot esculenta HOM05D000542 ORTHO05D000202 4.9e-08 62.0 112 33.0
Actinidia00510 Actinidia chinensis HOM05D000542 ORTHO05D000202 6.3e-08 61.6 127 30.7
CSS0039882 Camellia sinensis var. sinensis HOM05D000542 ORTHO05D000202 6.3e-08 61.6 121 36.4
Ciclev10008742m.g Citrus clementina HOM05D000542 ORTHO05D000202 6.3e-08 61.6 110 35.5
DCAR_022111 Daucus carota HOM05D000542 ORTHO05D000202 6.3e-08 61.6 119 34.5
Nitab4.5_0001133g0020 Nicotiana tabacum HOM05D000542 ORTHO05D000202 6.3e-08 61.6 101 36.6
TPR.G11983 Trifolium pratense HOM05D000542 ORTHO05D000202 6.3e-08 61.6 101 35.6
HanXRQChr08g0216631 Helianthus annuus HOM05D000542 ORTHO05D000202 8.3e-08 61.2 107 37.4
Prupe.4G169000 Prunus persica HOM05D000542 ORTHO05D000202 8.3e-08 61.2 118 33.1
Ah.01g019510 Amaranthus hybridus HOM05D000542 ORTHO05D000202 1.1e-07 60.8 116 35.3
Lsat_1_v5_gn_1_48880 Lactuca sativa HOM05D000542 ORTHO05D000202 1.1e-07 60.8 101 38.6
Potri.006G243600 Populus trichocarpa HOM05D000542 ORTHO05D000202 1.1e-07 60.8 113 36.3
Potri.006G243700 Populus trichocarpa HOM05D000542 ORTHO05D000202 1.1e-07 60.8 113 36.3
Prupe.1G476200 Prunus persica HOM05D000542 ORTHO05D000202 1.1e-07 60.8 101 35.6
Prupe.1G477200 Prunus persica HOM05D000542 ORTHO05D000202 1.1e-07 60.8 101 35.6
Prupe.1G477400 Prunus persica HOM05D000542 ORTHO05D000202 1.1e-07 60.8 101 35.6
Gohir.A03G212300 Gossypium hirsutum HOM05D000542 ORTHO05D000202 1.4e-07 60.5 109 34.9
Gohir.A04G121142 Gossypium hirsutum HOM05D000542 ORTHO05D000202 1.4e-07 60.5 104 32.7
Lsat_1_v5_gn_1_59360 Lactuca sativa HOM05D000542 ORTHO05D000202 1.4e-07 60.5 133 31.6
PGSC0003DMG400015052 Solanum tuberosum HOM05D000542 ORTHO05D000202 1.4e-07 60.5 112 34.8
PGSC0003DMG400015054 Solanum tuberosum HOM05D000542 ORTHO05D000202 1.4e-07 60.5 112 34.8
unitig_37.g12220 Utricularia gibba HOM05D000542 ORTHO05D000202 1.4e-07 60.5 101 36.6
Migut.B00248 Erythranthe guttata HOM05D000542 ORTHO05D000202 1.8e-07 60.1 101 34.7
Gohir.D02G233700 Gossypium hirsutum HOM05D000542 ORTHO05D000202 1.8e-07 60.1 109 34.9
Prupe.1G453500 Prunus persica HOM05D000542 ORTHO05D000202 1.8e-07 60.1 113 36.3
TAR383G0864 Trochodendron aralioides HOM05D000542 ORTHO05D000202 1.8e-07 60.1 110 36.4
CAN.G66.4 Capsicum annuum HOM05D000542 ORTHO05D000202 2.4e-07 59.7 115 32.2
Hma1.2p1_0066F.1_g036585 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 2.4e-07 59.7 133 30.1
Prupe.1G475300 Prunus persica HOM05D000542 ORTHO05D000202 2.4e-07 59.7 101 35.6
Hund00281 Selenicereus undatus HOM05D000542 ORTHO05D000202 2.4e-07 59.7 110 32.7
TAR624G0341 Trochodendron aralioides HOM05D000542 ORTHO05D000202 2.4e-07 59.7 110 34.5
CAN.G322.125 Capsicum annuum HOM05D000542 ORTHO05D000202 3.1e-07 59.3 108 32.4
Eucgr.C02887 Eucalyptus grandis HOM05D000542 ORTHO05D000202 3.1e-07 59.3 101 38.6
HanXRQChr01g0029491 Helianthus annuus HOM05D000542 ORTHO05D000202 3.1e-07 59.3 101 38.6
Lsat_1_v5_gn_1_48900 Lactuca sativa HOM05D000542 ORTHO05D000202 3.1e-07 59.3 101 38.6
Manes.03G126100 Manihot esculenta HOM05D000542 ORTHO05D000202 3.1e-07 59.3 111 38.7
Medtr1g008500 Medicago truncatula HOM05D000542 ORTHO05D000202 3.1e-07 59.3 133 30.8
Solyc05g015300.4 Solanum lycopersicum HOM05D000542 ORTHO05D000202 3.1e-07 59.3 113 33.6
PGSC0003DMG400025192 Solanum tuberosum HOM05D000542 ORTHO05D000202 3.1e-07 59.3 112 30.4
TAR624G1414 Trochodendron aralioides HOM05D000542 ORTHO05D000202 3.1e-07 59.3 101 36.6
vmacro05355 Vaccinium macrocarpon HOM05D000542 ORTHO05D000202 3.1e-07 59.3 101 36.6
CAN.G322.123 Capsicum annuum HOM05D000542 ORTHO05D000202 4.1e-07 58.9 108 30.6
Gorai.005G261700 Gossypium raimondii HOM05D000542 ORTHO05D000202 4.1e-07 58.9 109 33.9
Hma1.2p1_0066F.1_g036565 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 4.1e-07 58.9 107 32.7
Prupe.1G475900 Prunus persica HOM05D000542 ORTHO05D000202 4.1e-07 58.9 101 34.7
Sopen01g051690 Solanum pennellii HOM05D000542 ORTHO05D000202 4.1e-07 58.9 108 30.6
TWI75G0539 Tripterygium wilfordii HOM05D000542 ORTHO05D000202 4.1e-07 58.9 103 34.0
Ah.16g105060 Amaranthus hybridus HOM05D000542 ORTHO05D000202 5.4e-07 58.5 91 36.3
Hma1.2p1_0066F.1_g036520 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 5.4e-07 58.5 107 33.6
Hma1.2p1_0066F.1_g036550 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 5.4e-07 58.5 133 30.1
Prupe.1G465600 Prunus persica HOM05D000542 ORTHO05D000202 5.4e-07 58.5 104 33.7
Prupe.1G475100 Prunus persica HOM05D000542 ORTHO05D000202 5.4e-07 58.5 101 35.6
SGA_v2.0_scaffold243G44299 Striga asiatica HOM05D000542 ORTHO05D000202 5.4e-07 58.5 113 34.5
EL10Ac9g21740 Beta vulgaris HOM05D000542 ORTHO05D000202 7.0e-07 58.2 110 33.6
Cc02_g17720 Coffea canephora HOM05D000542 ORTHO05D000202 7.0e-07 58.2 104 33.7
Duzib248G1233 Durio zibethinus HOM05D000542 ORTHO05D000202 7.0e-07 58.2 111 32.4
Lsat_1_v5_gn_1_48980 Lactuca sativa HOM05D000542 ORTHO05D000202 7.0e-07 58.2 101 37.6
Peaxi162Scf00016g00087 Petunia axillaris HOM05D000542 ORTHO05D000202 7.0e-07 58.2 107 30.8
Prupe.1G476500 Prunus persica HOM05D000542 ORTHO05D000202 7.0e-07 58.2 101 34.7
Solyc01g109500.4 Solanum lycopersicum HOM05D000542 ORTHO05D000202 7.0e-07 58.2 108 30.6
TPR.G1345 Trifolium pratense HOM05D000542 ORTHO05D000202 7.0e-07 58.2 113 35.4
vmacro23259 Vaccinium macrocarpon HOM05D000542 ORTHO05D000202 7.0e-07 58.2 113 34.5
Medtr3g109490 Medicago truncatula HOM05D000542 ORTHO05D000202 9.2e-07 57.8 113 35.4
Peaxi162Scf00105g00026 Petunia axillaris HOM05D000542 ORTHO05D000202 9.2e-07 57.8 126 31.0
Prupe.4G257600 Prunus persica HOM05D000542 ORTHO05D000202 9.2e-07 57.8 97 36.1
Cc02_g17700 Coffea canephora HOM05D000542 ORTHO05D000202 1.2e-06 57.4 109 33.9
MELO3C020983.2 Cucumis melo HOM05D000542 ORTHO05D000202 1.2e-06 57.4 102 37.3
CsaV3_3G047340 Cucumis sativus L. HOM05D002580 ORTHO05D002811 1.2e-06 57.4 106 32.1
HanXRQChr13g0420961 Helianthus annuus HOM05D000542 ORTHO05D000202 1.2e-06 57.4 101 35.6
MD04G1018200 Malus domestica HOM05D000542 ORTHO05D000202 1.2e-06 57.4 104 36.5
Manes.03G125200 Manihot esculenta HOM05D000542 ORTHO05D000202 1.2e-06 57.4 106 36.8
Manes.03G125700 Manihot esculenta HOM05D000542 ORTHO05D000202 1.2e-06 57.4 106 36.8
Potri.018G036700 Populus trichocarpa HOM05D000542 ORTHO05D000202 1.2e-06 57.4 113 33.6
PGR044G1623 Punica granatum HOM05D000542 ORTHO05D000202 1.2e-06 57.4 101 35.6
Sabra06G0190800 Salix brachista HOM05D000542 ORTHO05D000202 1.2e-06 57.4 145 29.0
Sc09g0009050 Simmondsia chinensis HOM05D000542 ORTHO05D000202 1.2e-06 57.4 113 35.4
ClCG11G004500 Citrullus lanatus HOM05D000542 ORTHO05D000202 1.6e-06 57.0 102 36.3
Peaxi162Scf00110g00146 Petunia axillaris HOM05D000542 ORTHO05D000202 1.6e-06 57.0 107 31.8
Prupe.1G475800 Prunus persica HOM05D000542 ORTHO05D000202 1.6e-06 57.0 101 33.7
Prupe.1G477000 Prunus persica HOM05D000542 ORTHO05D000202 1.6e-06 57.0 101 34.7
Prupe.1G477800 Prunus persica HOM05D000542 ORTHO05D000202 1.6e-06 57.0 101 34.7
Sed0000459 Sechium edule HOM05D000542 ORTHO05D000202 1.6e-06 57.0 106 33.0
vmacro05356 Vaccinium macrocarpon HOM05D000542 ORTHO05D000202 1.6e-06 57.0 113 33.6
VMungo1127G2251 Vigna mungo HOM05D000542 ORTHO05D000202 1.6e-06 57.0 104 33.7
CSS0032418 Camellia sinensis var. sinensis HOM05D000542 ORTHO05D000202 2.0e-06 56.6 105 35.2
COL.COLO4_17855 Corchorus olitorius HOM05D000542 ORTHO05D000202 2.0e-06 56.6 113 33.6
MD08G1125700 Malus domestica HOM05D000542 ORTHO05D000202 2.0e-06 56.6 102 35.3
MD15G1105500 Malus domestica HOM05D000542 ORTHO05D000202 2.0e-06 56.6 102 35.3
Nitab4.5_0001133g0040 Nicotiana tabacum HOM05D000542 ORTHO05D000202 2.0e-06 56.6 130 28.5
Oeu027036.1 Olea europaea HOM05D000542 ORTHO05D000202 2.0e-06 56.6 110 34.5
Prupe.1G475200 Prunus persica HOM05D000542 ORTHO05D000202 2.0e-06 56.6 104 33.7
CAN.G1060.2 Capsicum annuum HOM05D000542 ORTHO05D000202 2.7e-06 56.2 94 38.3
Dinv42076 Davidia involucrata HOM05D000542 ORTHO05D000202 2.7e-06 56.2 135 28.9
Migut.A00237 Erythranthe guttata HOM05D000542 ORTHO05D000202 2.7e-06 56.2 113 34.5
QL11p043155 Quercus lobata HOM05D000542 ORTHO05D000202 2.7e-06 56.2 104 32.7
Sabra04G0081900 Salix brachista HOM05D000542 ORTHO05D000202 2.7e-06 56.2 129 32.6
CsaV3_2G014610 Cucumis sativus L. HOM05D000542 ORTHO05D000202 3.5e-06 55.8 102 36.3
FvH4_2g08510 Fragaria vesca HOM05D000542 ORTHO05D000202 3.5e-06 55.8 113 31.0
HanXRQChr01g0029521 Helianthus annuus HOM05D000542 ORTHO05D000202 3.5e-06 55.8 101 37.6
Lsat_1_v5_gn_1_49041 Lactuca sativa HOM05D000542 ORTHO05D000202 3.5e-06 55.8 145 30.3
Nitab4.5_0001337g0010 Nicotiana tabacum HOM05D000542 ORTHO05D000202 3.5e-06 55.8 101 33.7
Nitab4.5_0008809g0030 Nicotiana tabacum HOM05D000542 ORTHO05D000202 3.5e-06 55.8 100 34.0
QL01p017908 Quercus lobata HOM05D000542 ORTHO05D000202 3.5e-06 55.8 105 33.3
Atru.chr7.2175 Acer truncatum HOM05D000542 ORTHO05D000202 4.5e-06 55.5 113 33.6
Atru.chr7.2292 Acer truncatum HOM05D000542 ORTHO05D000202 4.5e-06 55.5 113 33.6
Actinidia14658 Actinidia chinensis HOM05D000542 ORTHO05D000202 4.5e-06 55.5 102 34.3
CANSAT25G3434 Cannabis sativa HOM05D000542 ORTHO05D000202 4.5e-06 55.5 102 37.3
AUR62009356 Chenopodium quinoa HOM05D000542 ORTHO05D000202 4.5e-06 55.5 99 34.3
Nitab4.5_0000250g0250 Nicotiana tabacum HOM05D000542 ORTHO05D000202 4.5e-06 55.5 94 37.2
Sopen08g022010 Solanum pennellii HOM05D000542 ORTHO05D000202 4.5e-06 55.5 94 37.2
TPR.G918 Trifolium pratense HOM05D000542 ORTHO05D000202 4.5e-06 55.5 103 37.9
CSS0026040 Camellia sinensis var. sinensis HOM05D000542 ORTHO05D000202 5.9e-06 55.1 111 33.3
Dinv42080 Davidia involucrata HOM05D000542 ORTHO05D000202 5.9e-06 55.1 108 32.4
Potri.009G114600 Populus trichocarpa HOM05D000542 ORTHO05D000202 5.9e-06 55.1 101 34.7
Solyc08g068150.4 Solanum lycopersicum HOM05D000542 ORTHO05D000202 5.9e-06 55.1 94 37.2
TWI32G1221 Tripterygium wilfordii HOM05D000542 ORTHO05D000202 5.9e-06 55.1 110 30.9
VMungo1309G0525 Vigna mungo HOM05D000542 ORTHO05D000202 5.9e-06 55.1 113 33.6
CSS0020117 Camellia sinensis var. sinensis HOM05D000542 ORTHO05D000202 7.7e-06 54.7 102 32.4
Carub.0001s3850 Capsella rubella HOM05D000542 ORTHO05D000202 7.7e-06 54.7 101 31.7
CAN.G291.6 Capsicum annuum HOM05D000542 ORTHO05D000202 7.7e-06 54.7 100 34.0
Ca_15374_v3 Cicer arietinum L. HOM05D000542 ORTHO05D000202 7.7e-06 54.7 110 32.7
COL.COLO4_18705 Corchorus olitorius HOM05D000542 ORTHO05D000202 7.7e-06 54.7 101 33.7
ECA233G6163 Erigeron canadensis HOM05D000542 ORTHO05D000202 7.7e-06 54.7 110 33.6
Manes.03G126301 Manihot esculenta HOM05D000542 ORTHO05D000202 7.7e-06 54.7 111 36.0
Medtr4g069570 Medicago truncatula HOM05D000542 ORTHO05D000202 7.7e-06 54.7 111 29.7
Phvul.008G158600 Phaseolus vulgaris HOM05D000542 ORTHO05D000202 7.7e-06 54.7 101 34.7


User provided reference genes

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