Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0810G221 Amborella trichopoda HOM05D010257 ORTHO05D012299 3.5e-85 318.2 151 100.0
ATR0810G086 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.5e-48 196.4 108 88.0
ATR0810G078 Amborella trichopoda HOM05D010257 ORTHO05D012299 6.3e-34 147.9 100 76.0
ATR0810G251 Amborella trichopoda HOM05D010257 ORTHO05D012299 6.3e-34 147.9 86 84.9
ATR0810G003 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.4e-33 146.7 96 78.1
ATR0810G190 Amborella trichopoda HOM05D010257 ORTHO05D012299 2.2e-31 139.4 87 78.2
ATR0810G021 Amborella trichopoda HOM05D010257 ORTHO05D012299 2.5e-30 136.0 79 84.8
ATR0716G045 Amborella trichopoda HOM05D010257 ORTHO05D012299 6.9e-25 117.9 84 67.9
ATR0733G194 Amborella trichopoda HOM05D010257 ORTHO05D012299 4.5e-24 115.2 123 50.4
ATR0810G277 Amborella trichopoda HOM05D010257 ORTHO05D012299 5.0e-23 111.7 79 68.4
ATR0810G144 Amborella trichopoda HOM05D010257 ORTHO05D012299 6.5e-23 111.3 86 65.1
ATR0810G098 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.9e-22 109.8 101 58.4
ATR0810G131 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.0e-20 104.0 86 64.0
ATR0810G181 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.0e-20 104.0 79 67.1
ATR0810G136 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.5e-19 100.1 96 55.2
ATR0810G252 Amborella trichopoda HOM05D010257 ORTHO05D012299 7.4e-19 97.8 100 51.0
ATR0810G203 Amborella trichopoda HOM05D010257 ORTHO05D012299 2.2e-18 96.3 64 73.4
ATR0810G072 Amborella trichopoda HOM05D010257 ORTHO05D012299 3.7e-18 95.5 100 53.0
ATR0810G123 Amborella trichopoda HOM05D010257 ORTHO05D012299 9.1e-17 90.9 82 57.3
ATR0810G126 Amborella trichopoda HOM05D010257 ORTHO05D012299 9.1e-17 90.9 66 69.7
Peaxi162Scf00110g00146 Petunia axillaris HOM05D000542 ORTHO05D000202 7.0e-09 64.7 103 35.9
Manes.10G047800 Manihot esculenta HOM05D000542 ORTHO05D000202 5.9e-08 61.6 79 38.0
Solyc01g109500.4 Solanum lycopersicum HOM05D000542 ORTHO05D000202 5.9e-08 61.6 105 35.2
AUR62023032 Chenopodium quinoa HOM05D000542 ORTHO05D000202 7.7e-08 61.2 79 43.0
Cc00_g27510 Coffea canephora HOM05D000542 ORTHO05D000202 7.7e-08 61.2 84 44.0
Sopen01g051690 Solanum pennellii HOM05D000542 ORTHO05D000202 7.7e-08 61.2 105 35.2
Actinidia00510 Actinidia chinensis HOM05D000542 ORTHO05D000202 1.0e-07 60.8 83 37.3
CiPaw.06G136600 Carya illinoinensis HOM05D000542 ORTHO05D000202 1.0e-07 60.8 77 41.6
PGSC0003DMG400025192 Solanum tuberosum HOM05D000542 ORTHO05D000202 1.0e-07 60.8 105 35.2
SGA_v2.0_scaffold13G06557 Striga asiatica HOM05D000542 ORTHO05D000202 1.0e-07 60.8 78 39.7
Nitab4.5_0009466g0030 Nicotiana tabacum HOM05D000542 ORTHO05D000202 1.3e-07 60.5 84 39.3
Peaxi162Scf00016g00087 Petunia axillaris HOM05D000542 ORTHO05D000202 1.7e-07 60.1 83 36.1
TAR628G0639 Trochodendron aralioides HOM05D000542 ORTHO05D000202 2.2e-07 59.7 94 37.2
TAR628G1303 Trochodendron aralioides HOM05D000542 ORTHO05D000202 2.2e-07 59.7 74 40.5
Cc09_g09700 Coffea canephora HOM05D000542 ORTHO05D012299 2.9e-07 59.3 76 44.7
Nitab4.5_0001794g0130 Nicotiana tabacum HOM05D000542 ORTHO05D000202 2.9e-07 59.3 84 39.3
ATR0810G092 Amborella trichopoda HOM05D010257 ORTHO05D012299 3.8e-07 58.9 55 56.4
CANSAT11G1682 Cannabis sativa HOM05D000542 ORTHO05D000202 3.8e-07 58.9 122 31.1
Cc06_g18690 Coffea canephora HOM05D000542 ORTHO05D000202 3.8e-07 58.9 84 42.9
MSTRG.27704 Avicennia marina HOM05D000542 ORTHO05D000202 5.0e-07 58.5 85 41.2
AUR62009353 Chenopodium quinoa HOM05D000542 ORTHO05D000202 5.0e-07 58.5 79 40.5
Duzib052G0326 Durio zibethinus HOM05D000542 ORTHO05D000202 6.5e-07 58.2 77 39.0
MD05G1068000 Malus domestica HOM05D000542 ORTHO05D000202 6.5e-07 58.2 81 37.0
Rhsim11G0175000 Rhododendron simsii HOM05D000542 ORTHO05D000202 6.5e-07 58.2 83 37.3
Rhsim11G0175700 Rhododendron simsii HOM05D000542 ORTHO05D000202 6.5e-07 58.2 83 37.3
TWI75G0539 Tripterygium wilfordii HOM05D000542 ORTHO05D000202 6.5e-07 58.2 74 40.5
CAN.G322.123 Capsicum annuum HOM05D000542 ORTHO05D000202 1.1e-06 57.4 83 37.3
HanXRQChr16g0505801 Helianthus annuus HOM05D000542 ORTHO05D000202 1.1e-06 57.4 79 43.0
Lj1g0008771 Lotus japonicus HOM05D000542 ORTHO05D000202 1.1e-06 57.4 110 30.9
COL.COLO4_25914 Corchorus olitorius HOM05D000542 ORTHO05D000202 1.5e-06 57.0 77 37.7
FvH4_2g08530 Fragaria vesca HOM05D000542 ORTHO05D000202 1.5e-06 57.0 83 37.3
FAN24G0974 Fragaria x ananassa HOM05D000542 ORTHO05D000202 1.5e-06 57.0 83 37.3
FAN24G1718 Fragaria x ananassa HOM05D000542 ORTHO05D000202 1.5e-06 57.0 83 37.3
FAN24G1871 Fragaria x ananassa HOM05D000542 ORTHO05D000202 1.5e-06 57.0 83 37.3
FAN24G2548 Fragaria x ananassa HOM05D000542 ORTHO05D000202 1.5e-06 57.0 83 37.3
FAN24G2825 Fragaria x ananassa HOM05D000542 ORTHO05D000202 1.5e-06 57.0 83 37.3
Manes.07G098200 Manihot esculenta HOM05D000542 ORTHO05D000202 1.5e-06 57.0 84 40.5
Cfa005017 Carpinus fangiana HOM05D000542 ORTHO05D000202 1.9e-06 56.6 77 37.7
MELO3C012542.2 Cucumis melo HOM05D000542 ORTHO05D000202 1.9e-06 56.6 76 42.1
Oeu027036.1 Olea europaea HOM05D000542 ORTHO05D000202 1.9e-06 56.6 98 42.9
CAN.G66.4 Capsicum annuum HOM05D000542 ORTHO05D000202 2.5e-06 56.2 103 35.9
COL.COLO4_21242 Corchorus olitorius HOM05D000542 ORTHO05D000202 2.5e-06 56.2 79 36.7
Hma1.2p1_0066F.1_g036520 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 2.5e-06 56.2 66 42.4
Hma1.2p1_0066F.1_g036565 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 2.5e-06 56.2 66 42.4
Oeu014339.1 Olea europaea HOM05D000542 ORTHO05D000202 2.5e-06 56.2 74 40.5
Os01g0733500 Oryza sativa ssp. japonica HOM05D000542 ORTHO05D000202 2.5e-06 56.2 79 40.5
TAR624G1414 Trochodendron aralioides HOM05D000542 ORTHO05D000202 2.5e-06 56.2 83 44.6
MSTRG.25897 Avicennia marina HOM05D000542 ORTHO05D000202 3.2e-06 55.8 79 45.6
CSS0020117 Camellia sinensis var. sinensis HOM05D000542 ORTHO05D000202 3.2e-06 55.8 103 36.9
Cfa005019 Carpinus fangiana HOM05D000542 ORTHO05D000202 3.2e-06 55.8 66 42.4
Dinv23537 Davidia involucrata HOM05D000542 ORTHO05D000202 3.2e-06 55.8 74 40.5
Hma1.2p1_0066F.1_g036585 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 3.2e-06 55.8 69 39.1
PGR142G0428 Punica granatum HOM05D000542 ORTHO05D000202 3.2e-06 55.8 74 39.2
RcHm_v2.0_Chr5g0051031 Rosa chinensis HOM05D000542 ORTHO05D000202 3.2e-06 55.8 74 43.2
VMungo1309G2113 Vigna mungo HOM05D000542 ORTHO05D000202 3.2e-06 55.8 90 34.4
CAN.G322.125 Capsicum annuum HOM05D000542 ORTHO05D000202 4.2e-06 55.5 103 33.0
CsaV3_2G014610 Cucumis sativus L. HOM05D000542 ORTHO05D000202 4.2e-06 55.5 86 36.0
ECA236G1757 Erigeron canadensis HOM05D000542 ORTHO05D000202 4.2e-06 55.5 79 38.0
FAN15G1897 Fragaria x ananassa HOM05D000542 ORTHO05D000202 4.2e-06 55.5 99 38.4
Lsat_1_v5_gn_1_59360 Lactuca sativa HOM05D000542 ORTHO05D000202 4.2e-06 55.5 94 41.5
Rhsim11G0175300 Rhododendron simsii HOM05D000542 ORTHO05D000202 4.2e-06 55.5 85 35.3
Sc18g0004590 Simmondsia chinensis HOM05D000542 ORTHO05D000202 4.2e-06 55.5 74 40.5
SGA_v2.0_scaffold243G44299 Striga asiatica HOM05D000542 ORTHO05D000202 4.2e-06 55.5 79 44.3
CiPaw.05G063100 Carya illinoinensis HOM05D000542 ORTHO05D000202 5.5e-06 55.1 91 30.8
FAN15G2010 Fragaria x ananassa HOM05D000542 ORTHO05D000202 5.5e-06 55.1 83 36.1
FAN27G3093 Fragaria x ananassa HOM05D000542 ORTHO05D000202 5.5e-06 55.1 77 39.0
Hma1.2p1_0066F.1_g036550 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 5.5e-06 55.1 69 39.1
Manes.17G100000 Manihot esculenta HOM05D000542 ORTHO05D000202 5.5e-06 55.1 81 34.6
Rhsim11G0175500 Rhododendron simsii HOM05D000542 ORTHO05D000202 5.5e-06 55.1 83 36.1
Ah.01g019510 Amaranthus hybridus HOM05D000542 ORTHO05D000202 7.2e-06 54.7 82 36.6
Aqoxy6G01077 Aquilegia oxysepala HOM05D000542 ORTHO05D000202 7.2e-06 54.7 74 37.8
CSS0038670 Camellia sinensis var. sinensis HOM05D000542 ORTHO05D000202 7.2e-06 54.7 74 37.8
CSS0046303 Camellia sinensis var. sinensis HOM05D000542 ORTHO05D000202 7.2e-06 54.7 74 37.8
ClCG02G005150 Citrullus lanatus HOM05D000542 ORTHO05D000202 7.2e-06 54.7 74 41.9
Cc02_g17700 Coffea canephora HOM05D000542 ORTHO05D000202 7.2e-06 54.7 84 38.1
QL11p043294 Quercus lobata HOM05D000542 ORTHO05D000202 7.2e-06 54.7 77 39.0
RcHm_v2.0_Chr6g0263891 Rosa chinensis HOM05D000542 ORTHO05D000202 7.2e-06 54.7 75 38.7
SalBow6G6229 Salvia bowleyana HOM05D000542 ORTHO05D000202 7.2e-06 54.7 83 34.9
CiPaw.08G022900 Carya illinoinensis HOM05D000542 ORTHO05D000202 9.4e-06 54.3 74 40.5
ClCG11G004500 Citrullus lanatus HOM05D000542 ORTHO05D000202 9.4e-06 54.3 77 39.0
FvH4_2g36250 Fragaria vesca HOM05D000542 ORTHO05D000202 9.4e-06 54.3 99 37.4
FAN15G1534 Fragaria x ananassa HOM05D000542 ORTHO05D000202 9.4e-06 54.3 77 36.4
FAN27G2567 Fragaria x ananassa HOM05D000542 ORTHO05D000202 9.4e-06 54.3 99 37.4
Nitab4.5_0001403g0020 Nicotiana tabacum HOM05D000542 ORTHO05D000202 9.4e-06 54.3 124 35.5


User provided reference genes

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