Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0810G155 Amborella trichopoda HOM05D006598 ORTHO05D008132 1.2e-191 672.9 326 100.0
MBI16_g31005_MAGBIO Magnolia biondii HOM05D006598 ORTHO05D008132 1.0e-126 457.2 315 67.6
TAR625G1490 Trochodendron aralioides HOM05D006598 ORTHO05D008132 4.4e-125 451.8 317 68.5
GSVIVG01009711001 Vitis vinifera HOM05D006598 ORTHO05D008132 5.7e-125 451.4 316 68.0
Dinv36084 Davidia involucrata HOM05D006598 ORTHO05D008132 2.8e-124 449.1 316 66.5
Dinv39426 Davidia involucrata HOM05D006598 ORTHO05D008132 1.8e-123 446.4 316 66.5
Atru.chr13.478 Acer truncatum HOM05D006598 ORTHO05D008132 7.0e-123 444.5 317 66.2
Aqoxy6G01111 Aquilegia oxysepala HOM05D006598 ORTHO05D008132 5.9e-122 441.4 325 65.8
Cfa018154 Carpinus fangiana HOM05D006598 ORTHO05D008132 6.5e-121 438.0 316 66.5
FvH4_2g39790 Fragaria vesca HOM05D006598 ORTHO05D008132 6.5e-121 438.0 317 66.9
FAN27G1472 Fragaria x ananassa HOM05D006598 ORTHO05D008132 1.5e-120 436.8 317 66.6
PSO541G3348 Papaver somniferum HOM05D006598 ORTHO05D008132 1.9e-120 436.4 316 65.2
Prupe.1G379200 Prunus persica HOM05D006598 ORTHO05D008132 2.5e-120 436.0 317 66.9
Duzib116G0116 Durio zibethinus HOM05D006598 ORTHO05D008132 3.2e-120 435.6 315 65.7
Haze_17965 Corylus avellana HOM05D006598 ORTHO05D008132 4.2e-120 435.3 316 65.8
FAN15G1256 Fragaria x ananassa HOM05D006598 ORTHO05D008132 4.2e-120 435.3 317 66.6
QL02p008626 Quercus lobata HOM05D006598 ORTHO05D008132 4.2e-120 435.3 322 65.2
FAN20G2142 Fragaria x ananassa HOM05D006598 ORTHO05D008132 5.5e-120 434.9 317 66.6
PSO675G7094 Papaver somniferum HOM05D006598 ORTHO05D008132 1.2e-119 433.7 316 64.9
COL.COLO4_26313 Corchorus olitorius HOM05D006598 ORTHO05D008132 1.4e-118 430.3 317 65.0
BcaC06g31749 Brassica carinata HOM05D006598 ORTHO05D008132 5.2e-118 428.3 317 62.8
CiPaw.15G078300 Carya illinoinensis HOM05D006598 ORTHO05D008132 5.2e-118 428.3 316 65.2
BcaC02g10811 Brassica carinata HOM05D006598 ORTHO05D008132 1.2e-117 427.2 317 62.5
C04p24910 Brassica napus HOM05D006598 ORTHO05D008132 1.2e-117 427.2 317 62.5
BolC4t23991H Brassica oleracea HOM05D006598 ORTHO05D008132 1.2e-117 427.2 317 62.5
Lsat_1_v5_gn_4_119301 Lactuca sativa HOM05D006598 ORTHO05D008132 2.6e-117 426.0 315 63.8
CSS0023084 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 4.4e-117 425.2 316 62.7
A06p48250 Brassica napus HOM05D006598 ORTHO05D008132 1.3e-116 423.7 317 62.1
BraA06t27693Z Brassica rapa HOM05D006598 ORTHO05D008132 1.3e-116 423.7 317 62.1
CAN.G1226.16 Capsicum annuum HOM05D006598 ORTHO05D008132 1.3e-116 423.7 316 64.9
Glyma.04G032000 Glycine max HOM05D006598 ORTHO05D008132 1.7e-116 423.3 317 63.1
Potri.002G260300 Populus trichocarpa HOM05D006598 ORTHO05D008132 1.7e-116 423.3 319 63.9
arahy.Tifrunner.gnm1.ann1.9Y7K4V Arachis hypogaea HOM05D006598 ORTHO05D008132 3.7e-116 422.2 318 63.2
Thhalv10003240m.g Eutrema salsugineum HOM05D006598 ORTHO05D008132 3.7e-116 422.2 317 62.1
arahy.Tifrunner.gnm1.ann1.KF7WGB Arachis hypogaea HOM05D006598 ORTHO05D008132 6.3e-116 421.4 318 63.2
ECA232G3558 Erigeron canadensis HOM05D006598 ORTHO05D008132 6.3e-116 421.4 318 63.8
Sabra02G0198100 Salix brachista HOM05D006598 ORTHO05D008132 6.3e-116 421.4 319 63.9
HPP92_018806 Vanilla planifolia HOM05D006598 ORTHO05D008132 8.3e-116 421.0 320 61.9
Cpa.g.sc36.79 Carica papaya HOM05D006598 ORTHO05D008132 1.1e-115 420.6 324 61.4
Eucgr.F01894 Eucalyptus grandis HOM05D006598 ORTHO05D008132 1.1e-115 420.6 317 63.7
CSS0013932 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 1.4e-115 420.2 311 64.6
CANSAT25G2965 Cannabis sativa HOM05D006598 ORTHO05D008132 1.4e-115 420.2 316 63.6
Ciclev10001322m.g Citrus clementina HOM05D006598 ORTHO05D008132 1.4e-115 420.2 319 62.4
Rhsim06G0033600 Rhododendron simsii HOM05D006598 ORTHO05D008132 1.4e-115 420.2 321 62.6
Aa31LG9G12810 Aethionema arabicum HOM05D006598 ORTHO05D008132 1.8e-115 419.9 317 62.8
Carub.0008s0618 Capsella rubella HOM05D006598 ORTHO05D008132 1.8e-115 419.9 318 61.6
Actinidia15332 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.4e-115 419.5 326 62.6
Sed0027447 Sechium edule HOM05D006598 ORTHO05D008132 2.4e-115 419.5 319 61.4
TWI36G0987 Tripterygium wilfordii HOM05D006598 ORTHO05D008132 2.4e-115 419.5 316 63.6
Nitab4.5_0010510g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 3.1e-115 419.1 317 63.1
PGSC0003DMG400003679 Solanum tuberosum HOM05D006598 ORTHO05D008132 4.1e-115 418.7 318 63.5
CARHR181720 Cardamine hirsuta HOM05D006598 ORTHO05D008132 5.4e-115 418.3 317 61.8
Migut.C00732 Erythranthe guttata HOM05D006598 ORTHO05D008132 9.2e-115 417.5 316 63.0
Lj4A39T66 Lonicera japonica HOM05D006598 ORTHO05D008132 9.2e-115 417.5 316 63.6
Glyma.06G032100 Glycine max HOM05D006598 ORTHO05D008132 1.2e-114 417.2 317 61.8
Phvul.009G057800 Phaseolus vulgaris HOM05D006598 ORTHO05D008132 1.2e-114 417.2 317 62.1
AL8G18360 Arabidopsis lyrata HOM05D006598 ORTHO05D008132 2.0e-114 416.4 317 61.2
vmacro21641 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 2.0e-114 416.4 315 62.9
THA.LOC104806941 Tarenaya hassleriana HOM05D006598 ORTHO05D008132 2.7e-114 416.0 318 61.6
Sp2g07390 Schrenkiella parvula HOM05D006598 ORTHO05D008132 3.5e-114 415.6 317 61.2
Ca_15516_v3 Cicer arietinum L. HOM05D006598 ORTHO05D008132 5.9e-114 414.8 316 62.0
Cc10_g02850 Coffea canephora HOM05D006598 ORTHO05D008132 5.9e-114 414.8 324 62.0
CDE04G2166 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 7.8e-114 414.5 322 60.6
Manes.18G026900 Manihot esculenta HOM05D006598 ORTHO05D008132 7.8e-114 414.5 321 62.6
Medtr3g111840 Medicago truncatula HOM05D006598 ORTHO05D008132 7.8e-114 414.5 316 62.0
VMungo1309G1899 Vigna mungo HOM05D006598 ORTHO05D008132 7.8e-114 414.5 317 62.1
Nitab4.5_0006280g0060 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.0e-113 414.1 317 62.8
PGR031G2630 Punica granatum HOM05D006598 ORTHO05D008132 1.7e-113 413.3 316 63.9
Actinidia38007 Actinidia chinensis HOM05D006598 ORTHO05D008132 2.3e-113 412.9 316 62.3
TPR.G12344 Trifolium pratense HOM05D006598 ORTHO05D008132 3.8e-113 412.1 316 61.4
Solyc04g080380.3 Solanum lycopersicum HOM05D006598 ORTHO05D008132 5.0e-113 411.8 318 63.2
Sopen04g033970 Solanum pennellii HOM05D006598 ORTHO05D008132 6.6e-113 411.4 318 63.2
Lj1g0003551 Lotus japonicus HOM05D006598 ORTHO05D008132 3.3e-112 409.1 317 61.8
SalBow7G0748 Salvia bowleyana HOM05D006598 ORTHO05D008132 3.3e-112 409.1 317 62.5
TAR628G1208 Trochodendron aralioides HOM05D006598 ORTHO05D008132 9.5e-112 407.5 300 64.7
AT5G42760 Arabidopsis thaliana HOM05D006598 ORTHO05D008132 1.6e-111 406.8 314 60.5
Rhsim07G0239600 Rhododendron simsii HOM05D006598 ORTHO05D008132 2.8e-111 406.0 318 60.7
Psat5g017160 Pisum sativum HOM05D006598 ORTHO05D008132 4.7e-111 405.2 321 60.4
Sc02g0006160 Simmondsia chinensis HOM05D006598 ORTHO05D008132 4.7e-111 405.2 316 61.4
SGA_v2.0_scaffold54G19518 Striga asiatica HOM05D006598 ORTHO05D008132 1.0e-110 404.1 317 61.5
vmacro04528 Vaccinium macrocarpon HOM05D006598 ORTHO05D008132 3.0e-110 402.5 317 60.3
MSTRG.25174 Avicennia marina HOM05D006598 ORTHO05D008132 1.8e-107 393.3 322 59.6
Hund26575 Selenicereus undatus HOM05D006598 ORTHO05D008132 2.4e-107 392.9 323 58.5
Thecc.08G027000 Theobroma cacao HOM05D006598 ORTHO05D008132 1.9e-104 383.3 317 60.6
Lalb_Chr11g0062331 Lupinus albus HOM05D006598 ORTHO05D008132 4.7e-103 378.6 316 58.5
AUR62035446 Chenopodium quinoa HOM05D006598 ORTHO05D008132 1.4e-102 377.1 316 57.3
Ah.11g043150 Amaranthus hybridus HOM05D006598 ORTHO05D008132 3.1e-102 375.9 318 57.2
Os03g0775000 Oryza sativa ssp. japonica HOM05D006598 ORTHO05D008132 3.7e-100 369.0 309 59.9
Nitab4.5_0005730g0030 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.1e-99 367.5 327 56.9
SEGI_39292 Sequoiadendron giganteum HOM05D006598 ORTHO05D008132 5.4e-99 365.2 327 57.8
Zm00001eb059150 Zea mays HOM05D006598 ORTHO05D008132 2.3e-97 359.8 309 57.3
Oeu049953.1 Olea europaea HOM05D006598 ORTHO05D008132 1.2e-93 347.4 316 54.4
CDE06G0448 Ceratophyllum demersum HOM05D006598 ORTHO05D008132 2.6e-93 346.3 280 58.6
Pp3c4_6590 Physcomitrium patens HOM05D006598 ORTHO05D008132 3.2e-83 312.8 313 54.0
AagrBONN_evm.TU.Sc2ySwM_228.3129 Anthoceros agrestis HOM05D006598 ORTHO05D008132 1.2e-82 310.8 314 51.0
Pp3c8_2950 Physcomitrium patens HOM05D006598 ORTHO05D008132 9.6e-80 301.2 308 52.6
HPP92_018704 Vanilla planifolia HOM05D006598 ORTHO05D008132 2.1e-79 300.1 238 58.8
TAR381G1379 Trochodendron aralioides HOM05D006598 ORTHO05D008132 9.9e-77 291.2 204 68.6
Nitab4.5_0001091g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 2.2e-68 263.5 202 63.4
Nn5g29606 Nelumbo nucifera HOM05D006598 ORTHO05D008132 2.7e-66 256.5 197 62.4
HPP92_018786 Vanilla planifolia HOM05D006598 ORTHO05D008132 2.6e-61 240.0 157 70.7
HanXRQChr16g0508491 Helianthus annuus HOM05D006598 ORTHO05D008132 1.3e-60 237.7 192 57.3
CSS0023478 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 7.9e-58 228.4 157 69.4
Pp3c12_23400 Physcomitrium patens HOM05D006598 ORTHO05D008132 1.1e-54 218.0 281 46.3
unitig_46.g17936 Utricularia gibba HOM05D006598 ORTHO05D008132 9.0e-54 214.9 180 57.8
FAN20G3016 Fragaria x ananassa HOM05D006598 ORTHO05D008132 7.9e-50 201.8 131 73.3
Actinidia29823 Actinidia chinensis HOM05D006598 ORTHO05D008132 1.8e-46 190.7 156 61.5
AUR62039547 Chenopodium quinoa HOM05D006598 ORTHO05D008132 5.0e-44 182.6 240 43.3
HPP92_018785 Vanilla planifolia HOM05D006598 ORTHO05D008132 1.6e-42 177.6 138 58.0
TAR381G0844 Trochodendron aralioides HOM05D006598 ORTHO05D008132 9.1e-38 161.8 115 66.1
Actinidia22543 Actinidia chinensis HOM05D006598 ORTHO05D008132 3.0e-33 146.7 125 56.0
MD15G1027400 Malus domestica HOM05D006598 ORTHO05D008132 1.5e-32 144.4 74 83.8
CSS0032599 Camellia sinensis var. sinensis HOM05D006598 ORTHO05D008132 3.7e-23 113.2 111 51.4
Actinidia29824 Actinidia chinensis HOM05D006598 ORTHO05D008132 7.5e-16 89.0 92 45.7
MCO09G151 Micromonas commoda HOM05D006598 ORTHO05D008132 1.7e-15 87.8 215 35.3
Nitab4.5_0000457g0120 Nicotiana tabacum HOM05D006598 ORTHO05D008132 1.1e-14 85.1 72 58.3
HanXRQChr09g0268921 Helianthus annuus HOM05D006598 ORTHO05D008132 9.1e-14 82.0 95 44.2
Cre17.g737650 Chlamydomonas reinhardtii HOM05D038115 ORTHO05D008132 1.5e-11 74.7 177 33.3
CBR_g22328 Chara braunii HOM05D006598 ORTHO05D008132 2.1e-10 70.9 118 36.4


User provided reference genes

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