Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0810G135 Amborella trichopoda HOM05D006469 ORTHO05D008034 4.1e-167 591.3 292 100.0
TAR376G0066 Trochodendron aralioides HOM05D006469 ORTHO05D008034 7.6e-44 181.8 188 54.3
Dinv33650 Davidia involucrata HOM05D006469 ORTHO05D008034 9.9e-44 181.4 180 52.2
PSO170G4882 Papaver somniferum HOM05D006469 ORTHO05D008034 6.4e-43 178.7 191 51.8
VMungo0251G1912 Vigna mungo HOM05D006469 ORTHO05D008034 8.4e-43 178.3 180 52.2
Gohir.A02G171200 Gossypium hirsutum HOM05D006469 ORTHO05D008034 1.9e-42 177.2 188 53.2
Migut.L00672 Erythranthe guttata HOM05D006469 ORTHO05D008034 3.2e-42 176.4 187 52.9
Gorai.003G009100 Gossypium raimondii HOM05D006469 ORTHO05D008034 4.2e-42 176.0 188 52.7
Lj4A220G94 Lonicera japonica HOM05D006469 ORTHO05D008034 4.2e-42 176.0 183 51.9
GSVIVG01018765001 Vitis vinifera HOM05D006469 ORTHO05D008034 4.2e-42 176.0 183 49.2
CiPaw.07G059900 Carya illinoinensis HOM05D006469 ORTHO05D008034 1.6e-41 174.1 195 49.2
Gohir.D03G008900 Gossypium hirsutum HOM05D006469 ORTHO05D008034 1.6e-41 174.1 188 52.1
TPR.G24083 Trifolium pratense HOM05D006469 ORTHO05D008034 3.5e-41 172.9 183 49.7
Thecc.01G016800 Theobroma cacao HOM05D006469 ORTHO05D008034 4.6e-41 172.6 186 53.2
Medtr8g075480 Medicago truncatula HOM05D006469 ORTHO05D008034 6.0e-41 172.2 184 50.5
Haze_03751 Corylus avellana HOM05D006469 ORTHO05D008034 1.3e-40 171.0 192 48.4
Glyma.02G047300 Glycine max HOM05D006469 ORTHO05D008034 1.7e-40 170.6 179 50.8
CAN.G1817.1 Capsicum annuum HOM05D006469 ORTHO05D008034 3.0e-40 169.9 186 48.9
Prupe.7G169600 Prunus persica HOM05D006469 ORTHO05D008034 5.1e-40 169.1 182 49.5
Potri.007G057000 Populus trichocarpa HOM05D006469 ORTHO05D008034 6.6e-40 168.7 181 49.7
QL06p050760 Quercus lobata HOM05D006469 ORTHO05D008034 6.6e-40 168.7 184 51.6
A01p02720 Brassica napus HOM05D006469 ORTHO05D008034 8.7e-40 168.3 183 51.4
C01p03020 Brassica napus HOM05D006469 ORTHO05D008034 8.7e-40 168.3 183 50.3
MELO3C007914.2 Cucumis melo HOM05D006469 ORTHO05D008034 1.1e-39 167.9 177 50.8
Phvul.003G263600 Phaseolus vulgaris HOM05D006469 ORTHO05D008034 1.1e-39 167.9 180 50.0
Ciclev10026134m.g Citrus clementina HOM05D006469 ORTHO05D008034 1.5e-39 167.5 188 48.4
MD02G1130100 Malus domestica HOM05D006469 ORTHO05D008034 1.5e-39 167.5 175 52.0
BraA01t00258Z Brassica rapa HOM05D006469 ORTHO05D008034 1.9e-39 167.2 183 50.8
PSO700G0153 Papaver somniferum HOM05D006469 ORTHO05D008034 1.9e-39 167.2 149 55.0
Migut.L00699 Erythranthe guttata HOM05D006469 ORTHO05D008034 3.3e-39 166.4 187 51.3
BcaNung00773 Brassica carinata HOM05D006469 ORTHO05D008034 4.3e-39 166.0 183 49.2
BolC1t00288H Brassica oleracea HOM05D006469 ORTHO05D008034 4.3e-39 166.0 183 49.2
Manes.02G105600 Manihot esculenta HOM05D006469 ORTHO05D008034 4.3e-39 166.0 180 50.6
Nn6g32040 Nelumbo nucifera HOM05D006469 ORTHO05D008034 4.3e-39 166.0 186 50.0
QL06p050655 Quercus lobata HOM05D006469 ORTHO05D008034 5.6e-39 165.6 184 51.1
Sopen03g006220 Solanum pennellii HOM05D006469 ORTHO05D008034 5.6e-39 165.6 186 47.3
PGSC0003DMG402022530 Solanum tuberosum HOM05D006469 ORTHO05D008034 5.6e-39 165.6 186 47.3
CANSAT25G3476 Cannabis sativa HOM05D006469 ORTHO05D008034 7.3e-39 165.2 190 45.8
Lalb_Chr05g0229831 Lupinus albus HOM05D006469 ORTHO05D008034 9.6e-39 164.9 177 50.3
arahy.Tifrunner.gnm1.ann1.DLPQ3A Arachis hypogaea HOM05D006469 ORTHO05D008034 1.3e-38 164.5 182 49.5
CsaV3_6G047220 Cucumis sativus L. HOM05D006469 ORTHO05D008034 2.1e-38 163.7 177 49.7
Sabra07G0048900 Salix brachista HOM05D006469 ORTHO05D008034 2.1e-38 163.7 186 48.9
Sp7g33770 Schrenkiella parvula HOM05D006469 ORTHO05D008034 3.6e-38 162.9 183 51.9
Solyc03g033470.3 Solanum lycopersicum HOM05D006469 ORTHO05D008034 3.6e-38 162.9 186 46.8
Lsat_1_v5_gn_2_76041 Lactuca sativa HOM05D006469 ORTHO05D008034 4.8e-38 162.5 177 47.5
Lj4g0017154 Lotus japonicus HOM05D006469 ORTHO05D008034 4.8e-38 162.5 180 47.8
Psat4g100640 Pisum sativum HOM05D006469 ORTHO05D008034 4.8e-38 162.5 180 49.4
AT4G35987 Arabidopsis thaliana HOM05D006469 ORTHO05D008034 6.2e-38 162.2 183 50.3
HanXRQChr04g0119941 Helianthus annuus HOM05D006469 ORTHO05D008034 8.1e-38 161.8 178 48.3
Hund14051 Selenicereus undatus HOM05D006469 ORTHO05D008034 1.1e-37 161.4 192 47.4
Sc07g0001050 Simmondsia chinensis HOM05D006469 ORTHO05D008034 1.1e-37 161.4 181 47.0
arahy.Tifrunner.gnm1.ann1.S7P5W6 Arachis hypogaea HOM05D006469 ORTHO05D008034 1.4e-37 161.0 182 48.9
FvH4_1g11701 Fragaria vesca HOM05D006469 ORTHO05D008034 1.8e-37 160.6 178 48.3
Atru.chr3.815 Acer truncatum HOM05D006469 ORTHO05D008034 2.4e-37 160.2 186 47.8
Carub.0007s0423 Capsella rubella HOM05D006469 ORTHO05D008034 2.4e-37 160.2 172 50.0
Os03g0243800 Oryza sativa ssp. japonica HOM05D006469 ORTHO05D008034 2.4e-37 160.2 188 49.5
FAN19G1692 Fragaria x ananassa HOM05D006469 ORTHO05D008034 3.1e-37 159.8 173 48.6
Zm00001eb398850 Zea mays HOM05D006469 ORTHO05D008034 3.1e-37 159.8 191 46.1
RcHm_v2.0_Chr2g0099281 Rosa chinensis HOM05D006469 ORTHO05D008034 4.0e-37 159.5 176 48.3
MSTRG.3610 Avicennia marina HOM05D006469 ORTHO05D008034 5.3e-37 159.1 187 50.3
SalBow5G1778 Salvia bowleyana HOM05D006469 ORTHO05D008034 5.3e-37 159.1 186 50.0
Ah.03g148920 Amaranthus hybridus HOM05D006469 ORTHO05D008034 6.9e-37 158.7 171 50.9
Thhalv10025786m.g Eutrema salsugineum HOM05D006469 ORTHO05D008034 6.9e-37 158.7 181 48.6
CARHR244380 Cardamine hirsuta HOM05D006469 ORTHO05D008034 2.6e-36 156.8 183 49.7
PGR102G1692 Punica granatum HOM05D006469 ORTHO05D008034 3.4e-36 156.4 180 47.2
Cpa.g.sc6.265 Carica papaya HOM05D006469 ORTHO05D008034 5.8e-36 155.6 173 48.0
unitig_46.g18721 Utricularia gibba HOM05D006469 ORTHO05D008034 1.3e-35 154.5 184 48.4
Aa31LG6G12960 Aethionema arabicum HOM05D006469 ORTHO05D008034 2.2e-35 153.7 218 44.0
Cc07_g10870 Coffea canephora HOM05D006469 ORTHO05D008034 2.2e-35 153.7 186 46.2
CANSAT25G3534 Cannabis sativa HOM05D006469 ORTHO05D008034 4.9e-35 152.5 189 43.9
Eucgr.I02338 Eucalyptus grandis HOM05D006469 ORTHO05D008034 6.4e-35 152.1 176 51.1
CDE02G4243 Ceratophyllum demersum HOM05D006469 ORTHO05D008034 8.4e-35 151.8 176 46.6
Nitab4.5_0003548g0050 Nicotiana tabacum HOM05D006469 ORTHO05D008034 1.9e-34 150.6 143 51.0
AUR62029479 Chenopodium quinoa HOM05D006469 ORTHO05D008034 5.4e-34 149.1 181 45.9
Aqoxy5G01802 Aquilegia oxysepala HOM05D006469 ORTHO05D008034 2.7e-33 146.7 188 46.8
Actinidia17434 Actinidia chinensis HOM05D006469 ORTHO05D008034 7.9e-33 145.2 176 48.3
Cfa006983 Carpinus fangiana HOM05D006469 ORTHO05D008034 2.3e-32 143.7 179 46.4
FAN26G2561 Fragaria x ananassa HOM05D006469 ORTHO05D008034 3.0e-32 143.3 147 50.3
FAN23G0491 Fragaria x ananassa HOM05D000153 ORTHO05D000118 3.9e-32 142.9 145 50.3
EL10Ac6g15486 Beta vulgaris HOM05D006469 ORTHO05D008034 4.3e-31 139.4 180 45.6
QL11p035074 Quercus lobata HOM05D006469 ORTHO05D008034 4.3e-31 139.4 240 39.6
TWI73G0981 Tripterygium wilfordii HOM05D006469 ORTHO05D008034 4.3e-31 139.4 203 44.3
Hma1.2p1_0258F.1_g104050 Hydrangea macrophylla HOM05D006469 ORTHO05D008034 7.4e-31 138.7 108 60.2
BcaC03g14989 Brassica carinata HOM05D006469 ORTHO05D008034 5.3e-29 132.5 183 43.7
Pp3c16_25190 Physcomitrium patens HOM05D006469 ORTHO05D008034 6.9e-29 132.1 178 41.0
ECA238G1797 Erigeron canadensis HOM05D006469 ORTHO05D008034 1.2e-28 131.3 196 39.8
MBI05_g33508_MAGBIO Magnolia biondii HOM05D006469 ORTHO05D008034 1.2e-28 131.3 88 70.5
Mapoly0087s0053 Marchantia polymorpha HOM05D006469 ORTHO05D008034 4.5e-28 129.4 176 39.8
Nitab4.5_0000864g0140 Nicotiana tabacum HOM05D006469 ORTHO05D008034 4.5e-28 129.4 187 42.2
Oeu005141.2 Olea europaea HOM05D006469 ORTHO05D008034 1.3e-27 127.9 188 41.5
CSS0000310 Camellia sinensis var. sinensis HOM05D006469 ORTHO05D008034 1.7e-27 127.5 174 46.6
CSS0021178 Camellia sinensis var. sinensis HOM05D006469 ORTHO05D008034 4.9e-27 125.9 174 46.0
AUR62003357 Chenopodium quinoa HOM05D006469 ORTHO05D008034 4.6e-25 119.4 78 65.4
SGA_v2.0_scaffold45G17085 Striga asiatica HOM05D006469 ORTHO05D008034 6.0e-25 119.0 92 59.8
THA.LOC104807502 Tarenaya hassleriana HOM05D006469 ORTHO05D008034 1.8e-24 117.5 97 56.7
Sed0020941 Sechium edule HOM05D006469 ORTHO05D008034 2.3e-24 117.1 78 65.4
C09p44210 Brassica napus HOM05D006469 ORTHO05D008034 8.7e-24 115.2 189 41.3
BcaC04g20386 Brassica carinata HOM05D006469 ORTHO05D008034 1.5e-23 114.4 183 39.3
BcaC04g20390 Brassica carinata HOM05D006469 ORTHO05D008034 1.5e-23 114.4 183 39.3
BolC9t57293H Brassica oleracea HOM05D006469 ORTHO05D008034 1.5e-23 114.4 183 39.3
Nitab4.5_0008011g0040 Nicotiana tabacum HOM05D006469 ORTHO05D008034 9.6e-23 111.7 188 38.3
Peaxi162Scf00328g00828 Petunia axillaris HOM05D006469 ORTHO05D008034 6.9e-21 105.5 255 32.9
ClCG01G020380 Citrullus lanatus HOM05D000348 ORTHO05D000244 5.8e-20 102.4 202 36.6
Actinidia22967 Actinidia chinensis HOM05D006469 ORTHO05D008034 1.0e-19 101.7 149 38.3
Hma1.2p1_0258F.1_g104040 Hydrangea macrophylla HOM05D006469 ORTHO05D008034 5.5e-18 95.9 61 70.5
SMO361G0665 Selaginella moellendorffii HOM05D006469 ORTHO05D008034 7.9e-17 92.0 59 66.1
Ca_22385_v3 Cicer arietinum L. HOM05D006469 ORTHO05D008034 3.9e-16 89.7 57 66.7
Sabra05G0092400 Salix brachista HOM05D006469 ORTHO05D008034 1.9e-15 87.4 184 36.4
BolC2t08600H Brassica oleracea HOM05D006469 ORTHO05D008034 1.4e-13 81.3 153 35.9
DCAR_021507 Daucus carota HOM05D006469 ORTHO05D008034 4.1e-13 79.7 129 40.3
Manes.01G147000 Manihot esculenta HOM05D006469 ORTHO05D008034 3.6e-09 66.6 47 63.8
Duzib147G1015 Durio zibethinus HOM05D006469 ORTHO05D008034 1.8e-08 64.3 114 40.4


User provided reference genes

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