Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0810G038 Amborella trichopoda HOM05D006476 ORTHO05D008178 6.9e-53 210.3 101 100.0
ATR0789G002 Amborella trichopoda HOM05D006476 ORTHO05D008178 3.5e-49 198.0 101 95.0
TAR633G1736 Trochodendron aralioides HOM05D006476 ORTHO05D008178 3.8e-27 124.8 80 67.5
Gohir.A01G229200 Gossypium hirsutum HOM05D006476 ORTHO05D008178 5.0e-27 124.4 84 65.5
Thecc.05G008700 Theobroma cacao HOM05D006476 ORTHO05D008178 5.0e-27 124.4 98 57.1
Gohir.D01G219100 Gossypium hirsutum HOM05D006476 ORTHO05D008178 6.5e-27 124.0 84 65.5
Gorai.002G265900 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.1e-26 123.2 84 64.3
PGR031G1226 Punica granatum HOM05D006476 ORTHO05D008178 1.1e-26 123.2 89 62.9
Gohir.D04G134700 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.4e-26 122.9 98 56.1
Gorai.012G118300 Gossypium raimondii HOM05D006476 ORTHO05D008178 1.4e-26 122.9 98 56.1
Cpa.g.sc162.36 Carica papaya HOM05D006476 ORTHO05D008178 7.2e-26 120.6 88 60.2
Dinv10268 Davidia involucrata HOM05D006476 ORTHO05D008178 1.6e-25 119.4 99 54.5
Gohir.A04G095014 Gossypium hirsutum HOM05D006476 ORTHO05D008178 1.6e-25 119.4 98 54.1
QL07p034180 Quercus lobata HOM05D006476 ORTHO05D008178 1.4e-24 116.3 84 63.1
RcHm_v2.0_Chr3g0461841 Rosa chinensis HOM05D006476 ORTHO05D008178 3.9e-24 114.8 98 55.1
ClCG10G022410 Citrullus lanatus HOM05D006476 ORTHO05D008178 5.1e-24 114.4 79 62.0
CiPaw.10G160000 Carya illinoinensis HOM05D006476 ORTHO05D008178 8.8e-24 113.6 75 64.0
Prupe.6G283400 Prunus persica HOM05D006476 ORTHO05D008178 1.1e-23 113.2 99 54.5
Cc06_g00920 Coffea canephora HOM05D006476 ORTHO05D008178 2.5e-23 112.1 81 60.5
Sopen09g006940 Solanum pennellii HOM05D006476 ORTHO05D008178 4.3e-23 111.3 89 56.2
Sed0000477 Sechium edule HOM05D006476 ORTHO05D008178 5.7e-23 110.9 88 53.4
Solyc09g013100.3 Solanum lycopersicum HOM05D006476 ORTHO05D008178 7.4e-23 110.5 89 56.2
PGSC0003DMG400029192 Solanum tuberosum HOM05D006476 ORTHO05D008178 7.4e-23 110.5 89 56.2
Hma1.2p1_0479F.1_g161560 Hydrangea macrophylla HOM05D006476 ORTHO05D008178 9.7e-23 110.2 89 56.2
FvH4_6g10790 Fragaria vesca HOM05D006476 ORTHO05D008178 1.7e-22 109.4 94 53.2
FAN05G3786 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.7e-22 109.4 94 53.2
FAN05G4924 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.7e-22 109.4 94 53.2
FAN09G2591 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.7e-22 109.4 94 53.2
FAN09G3668 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.7e-22 109.4 94 53.2
FAN14G4129 Fragaria x ananassa HOM05D006476 ORTHO05D008178 1.7e-22 109.4 94 53.2
MD12G1177900 Malus domestica HOM05D006476 ORTHO05D008178 2.2e-22 109.0 72 65.3
Sc07g0006480 Simmondsia chinensis HOM05D006476 ORTHO05D008178 2.2e-22 109.0 98 54.1
AT5G01590 Arabidopsis thaliana HOM05D006476 ORTHO05D008178 2.8e-22 108.6 82 58.5
Eucgr.A00607 Eucalyptus grandis HOM05D006476 ORTHO05D008178 2.8e-22 108.6 88 56.8
Nn2g10977 Nelumbo nucifera HOM05D006476 ORTHO05D008178 2.8e-22 108.6 89 52.8
Solyc09g015470.4 Solanum lycopersicum HOM05D006476 ORTHO05D008178 2.8e-22 108.6 89 55.1
Nitab4.5_0000230g0070 Nicotiana tabacum HOM05D006476 ORTHO05D008178 3.7e-22 108.2 89 52.8
Carub.0006s0024 Capsella rubella HOM05D006476 ORTHO05D008178 4.8e-22 107.8 82 58.5
CARHR211940 Cardamine hirsuta HOM05D006476 ORTHO05D008178 4.8e-22 107.8 82 58.5
Lalb_Chr12g0207111 Lupinus albus HOM05D006476 ORTHO05D008178 4.8e-22 107.8 83 53.0
Nitab4.5_0004676g0040 Nicotiana tabacum HOM05D006476 ORTHO05D008178 4.8e-22 107.8 89 51.7
COL.COLO4_14474 Corchorus olitorius HOM05D006476 ORTHO05D008178 6.3e-22 107.5 98 51.0
Potri.016G123900 Populus trichocarpa HOM05D006476 ORTHO05D008178 6.3e-22 107.5 91 54.9
CSS0013060 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 8.2e-22 107.1 76 59.2
CSS0023949 Camellia sinensis var. sinensis HOM05D006476 ORTHO05D008178 8.2e-22 107.1 76 59.2
Duzib093G1646 Durio zibethinus HOM05D006476 ORTHO05D008178 1.1e-21 106.7 84 54.8
Sp6g40850 Schrenkiella parvula HOM05D006476 ORTHO05D008178 1.1e-21 106.7 82 57.3
AL6G10460 Arabidopsis lyrata HOM05D006476 ORTHO05D008178 1.4e-21 106.3 82 57.3
CDE04G2527 Ceratophyllum demersum HOM05D006476 ORTHO05D008178 1.4e-21 106.3 98 52.0
Sabra16G0118700 Salix brachista HOM05D006476 ORTHO05D008178 1.4e-21 106.3 82 56.1
AUR62030780 Chenopodium quinoa HOM05D006476 ORTHO05D008178 2.4e-21 105.5 76 59.2
PSO765G0213 Papaver somniferum HOM05D006476 ORTHO05D008178 2.4e-21 105.5 92 54.3
BcaB01g06105 Brassica carinata HOM05D006476 ORTHO05D008178 3.1e-21 105.1 82 54.9
C03p00370 Brassica napus HOM05D006476 ORTHO05D008178 3.1e-21 105.1 82 54.9
BolC3t12605H Brassica oleracea HOM05D006476 ORTHO05D008178 3.1e-21 105.1 82 54.9
CAN.G168.26 Capsicum annuum HOM05D006476 ORTHO05D008178 3.1e-21 105.1 89 52.8
Haze_21064 Corylus avellana HOM05D006476 ORTHO05D008178 3.1e-21 105.1 74 62.2
BcaB01g06237 Brassica carinata HOM05D006476 ORTHO05D008178 4.1e-21 104.8 79 58.2
Thhalv10013251m.g Eutrema salsugineum HOM05D006476 ORTHO05D008178 4.1e-21 104.8 82 57.3
AUR62030513 Chenopodium quinoa HOM05D006476 ORTHO05D008178 5.3e-21 104.4 75 60.0
A03p00230 Brassica napus HOM05D006476 ORTHO05D008178 9.1e-21 103.6 82 53.7
BraA03t09413Z Brassica rapa HOM05D006476 ORTHO05D008178 9.1e-21 103.6 82 53.7
Cfa017133 Carpinus fangiana HOM05D006476 ORTHO05D008178 1.2e-20 103.2 74 59.5
unitig_26.g9345 Utricularia gibba HOM05D006476 ORTHO05D008178 1.2e-20 103.2 81 50.6
MSTRG.10202 Avicennia marina HOM05D006476 ORTHO05D008178 1.5e-20 102.8 74 58.1
CAN.G1194.2 Capsicum annuum HOM05D006476 ORTHO05D008178 1.5e-20 102.8 89 51.7
Lj3g0015173 Lotus japonicus HOM05D006476 ORTHO05D008178 2.0e-20 102.4 95 49.5
Manes.09G110300 Manihot esculenta HOM05D006476 ORTHO05D008178 2.0e-20 102.4 92 51.1
PSO349G0327 Papaver somniferum HOM05D006476 ORTHO05D008178 2.0e-20 102.4 93 52.7
Oeu038728.1 Olea europaea HOM05D006476 ORTHO05D008178 2.6e-20 102.1 84 52.4
TWI53G1048 Tripterygium wilfordii HOM05D006476 ORTHO05D008178 3.4e-20 101.7 75 57.3
GSVIVG01030297001 Vitis vinifera HOM05D006476 ORTHO05D008178 1.3e-19 99.8 83 56.6
Migut.L02041 Erythranthe guttata HOM05D006476 ORTHO05D008178 1.4e-18 96.3 62 64.5
Aa31LG1G23210 Aethionema arabicum HOM05D006476 ORTHO05D008178 2.5e-18 95.5 81 53.1
THA.LOC104816184 Tarenaya hassleriana HOM05D006476 ORTHO05D008178 2.5e-18 95.5 84 53.6
arahy.Tifrunner.gnm1.ann1.39JBYW Arachis hypogaea HOM05D006476 ORTHO05D008178 3.2e-18 95.1 84 48.8
EL10Ac5g12509 Beta vulgaris HOM05D006476 ORTHO05D008178 3.2e-18 95.1 90 46.7
Glyma.01G124200 Glycine max HOM05D006476 ORTHO05D008178 7.2e-18 94.0 96 43.8
CANSAT35G1014 Cannabis sativa HOM05D006476 ORTHO05D008178 9.4e-18 93.6 76 52.6
VMungo0331G1781 Vigna mungo HOM05D006476 ORTHO05D008178 9.4e-18 93.6 98 43.9
Atru.chr8.2316 Acer truncatum HOM05D006476 ORTHO05D008178 1.2e-17 93.2 86 53.5
arahy.Tifrunner.gnm1.ann1.86RN6H Arachis hypogaea HOM05D006476 ORTHO05D008178 1.6e-17 92.8 84 47.6
Ah.12g058950 Amaranthus hybridus HOM05D006476 ORTHO05D008178 2.1e-17 92.4 98 43.9
arahy.Tifrunner.gnm1.ann1.36T17X Arachis hypogaea HOM05D006476 ORTHO05D008178 2.1e-17 92.4 67 53.7
Aqoxy1G01315 Aquilegia oxysepala HOM05D006476 ORTHO05D008178 2.7e-17 92.0 99 48.5
HPP92_001920 Vanilla planifolia HOM05D006476 ORTHO05D008178 2.7e-17 92.0 79 53.2
Haze_21099 Corylus avellana HOM05D006476 ORTHO05D008178 3.6e-17 91.7 83 53.0
HanXRQChr10g0287121 Helianthus annuus HOM05D006476 ORTHO05D008178 3.6e-17 91.7 82 48.8
Phvul.010G065700 Phaseolus vulgaris HOM05D006476 ORTHO05D008178 3.6e-17 91.7 98 41.8
ECA247G0212 Erigeron canadensis HOM05D006476 ORTHO05D008178 1.8e-16 89.4 82 48.8
Ciclev10011480m.g Citrus clementina HOM05D006476 ORTHO05D008178 8.8e-16 87.0 78 51.3
Hund10946 Selenicereus undatus HOM05D006476 ORTHO05D008178 1.5e-15 86.3 89 42.7
MELO3C009137.2 Cucumis melo HOM05D006476 ORTHO05D008178 2.0e-15 85.9 77 48.1
CsaV3_3G033460 Cucumis sativus L. HOM05D006476 ORTHO05D008178 2.6e-15 85.5 79 41.8
SGA_v2.0_scaffold110G31194 Striga asiatica HOM05D006476 ORTHO05D008178 1.4e-13 79.7 83 44.6
Lsat_1_v5_gn_9_37301 Lactuca sativa HOM05D006476 ORTHO05D008178 3.1e-13 78.6 82 42.7
Ca_20338_v3 Cicer arietinum L. HOM05D006476 ORTHO05D008178 5.3e-13 77.8 91 41.8
BcaNung03295 Brassica carinata HOM05D006476 ORTHO05D008178 9.1e-13 77.0 62 51.6
C09p74660 Brassica napus HOM05D000872 ORTHO05D000777 9.1e-13 77.0 62 51.6
BolC9t60200H Brassica oleracea HOM05D006476 ORTHO05D008178 9.1e-13 77.0 62 51.6
Actinidia29077 Actinidia chinensis HOM05D006476 ORTHO05D008178 1.3e-11 73.2 88 40.9
Medtr4g014600 Medicago truncatula HOM05D006476 ORTHO05D008178 1.7e-11 72.8 84 39.3
RcHm_v2.0_Chr3g0461921 Rosa chinensis HOM05D006476 ORTHO05D008178 3.6e-09 65.1 33 75.8
Psat7g247200 Pisum sativum HOM05D006476 ORTHO05D008178 4.7e-09 64.7 50 46.0
TPR.G5241 Trifolium pratense HOM05D006476 ORTHO05D008178 1.4e-08 63.2 67 40.3
Lj3A863T42 Lonicera japonica HOM05D006476 ORTHO05D008178 8.8e-08 60.5 43 58.1
Peaxi162Scf01132g00347 Petunia axillaris HOM05D006476 ORTHO05D008178 2.8e-06 55.5 89 38.2


User provided reference genes

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