Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0810G021 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.6e-70 269.2 132 100.0
ATR0810G086 Amborella trichopoda HOM05D010257 ORTHO05D012299 2.4e-58 228.8 130 86.2
ATR0810G078 Amborella trichopoda HOM05D010257 ORTHO05D012299 5.1e-56 221.1 130 85.4
ATR0810G003 Amborella trichopoda HOM05D010257 ORTHO05D012299 6.9e-53 210.7 127 83.5
ATR0810G190 Amborella trichopoda HOM05D010257 ORTHO05D012299 2.0e-52 209.1 130 80.0
ATR0810G144 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.2e-44 183.3 126 71.4
ATR0810G251 Amborella trichopoda HOM05D010257 ORTHO05D012299 7.6e-44 180.6 104 87.5
ATR0810G136 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.9e-39 166.0 127 64.6
ATR0733G194 Amborella trichopoda HOM05D010257 ORTHO05D012299 2.2e-38 162.5 127 63.0
ATR0810G203 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.4e-37 159.8 112 73.2
ATR0810G277 Amborella trichopoda HOM05D010257 ORTHO05D012299 4.5e-36 154.8 122 63.9
ATR0810G098 Amborella trichopoda HOM05D010257 ORTHO05D012299 5.0e-35 151.4 119 64.7
ATR0810G123 Amborella trichopoda HOM05D010257 ORTHO05D012299 3.2e-34 148.7 126 60.3
ATR0810G181 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.0e-32 143.7 123 60.2
ATR0810G131 Amborella trichopoda HOM05D010257 ORTHO05D012299 3.9e-32 141.7 123 59.3
ATR0810G221 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.4e-29 133.3 79 84.8
ATR0810G126 Amborella trichopoda HOM05D010257 ORTHO05D012299 2.6e-28 129.0 98 71.4
ATR0716G045 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.3e-27 126.7 86 74.4
ATR0810G252 Amborella trichopoda HOM05D010257 ORTHO05D012299 9.4e-26 120.6 104 57.7
ATR0810G072 Amborella trichopoda HOM05D010257 ORTHO05D012299 1.2e-20 103.6 86 60.5
ATR0810G092 Amborella trichopoda HOM05D010257 ORTHO05D012299 3.5e-12 75.5 59 69.5
CSS0026040 Camellia sinensis var. sinensis HOM05D000542 ORTHO05D000202 2.2e-11 72.8 122 38.5
TAR624G1414 Trochodendron aralioides HOM05D000542 ORTHO05D000202 2.2e-11 72.8 146 39.0
Peaxi162Scf00276g00093 Petunia axillaris HOM05D000542 ORTHO05D000202 5.5e-10 68.2 130 35.4
Oeu027036.1 Olea europaea HOM05D000542 ORTHO05D000202 1.6e-09 66.6 153 34.6
Lsat_1_v5_gn_1_59360 Lactuca sativa HOM05D000542 ORTHO05D000202 2.7e-09 65.9 128 38.3
COL.COLO4_18705 Corchorus olitorius HOM05D000542 ORTHO05D000202 3.6e-09 65.5 139 34.5
Cc08_g08450 Coffea canephora HOM05D000542 ORTHO05D000202 6.1e-09 64.7 134 36.6
vmacro05355 Vaccinium macrocarpon HOM05D000542 ORTHO05D000202 1.8e-08 63.2 144 34.0
ECA233G4799 Erigeron canadensis HOM05D000542 ORTHO05D000202 5.2e-08 61.6 137 34.3
Medtr3g109490 Medicago truncatula HOM05D000542 ORTHO05D000202 5.2e-08 61.6 147 34.7
Actinidia15724 Actinidia chinensis HOM05D000542 ORTHO05D000202 6.7e-08 61.2 147 32.0
MD15G1105500 Malus domestica HOM05D000542 ORTHO05D000202 6.7e-08 61.2 118 37.3
Dinv14219 Davidia involucrata HOM05D000542 ORTHO05D000202 8.8e-08 60.8 151 35.1
Os05g0217800 Oryza sativa ssp. japonica HOM05D000542 ORTHO05D000202 8.8e-08 60.8 122 34.4
vmacro23259 Vaccinium macrocarpon HOM05D000542 ORTHO05D000202 8.8e-08 60.8 126 38.1
Cc00_g27510 Coffea canephora HOM05D000542 ORTHO05D000202 1.2e-07 60.5 68 54.4
Peaxi162Scf00110g00146 Petunia axillaris HOM05D000542 ORTHO05D000202 1.5e-07 60.1 69 46.4
Cc09_g09700 Coffea canephora HOM05D000542 ORTHO05D012299 2.0e-07 59.7 68 52.9
Nitab4.5_0009466g0030 Nicotiana tabacum HOM05D000542 ORTHO05D000202 2.0e-07 59.7 67 47.8
AUR62023032 Chenopodium quinoa HOM05D000542 ORTHO05D000202 3.3e-07 58.9 66 48.5
Duzib170G0648 Durio zibethinus HOM05D000542 ORTHO05D000202 3.3e-07 58.9 131 34.4
MD08G1125700 Malus domestica HOM05D000542 ORTHO05D000202 3.3e-07 58.9 118 36.4
SalBow4G2992 Salvia bowleyana HOM05D000542 ORTHO05D000202 3.3e-07 58.9 169 30.2
CiPaw.08G022900 Carya illinoinensis HOM05D000542 ORTHO05D000202 4.4e-07 58.5 96 38.5
Nitab4.5_0001794g0130 Nicotiana tabacum HOM05D000542 ORTHO05D000202 4.4e-07 58.5 67 47.8
Atru.chr5.2994 Acer truncatum HOM05D000542 ORTHO05D000202 5.7e-07 58.2 69 44.9
MSTRG.25897 Avicennia marina HOM05D000542 ORTHO05D000202 5.7e-07 58.2 66 53.0
Cc06_g18690 Coffea canephora HOM05D000542 ORTHO05D000202 5.7e-07 58.2 68 52.9
CAN.G66.4 Capsicum annuum HOM05D000542 ORTHO05D000202 7.5e-07 57.8 75 44.0
Cc08_g08860 Coffea canephora HOM05D000542 ORTHO05D000202 7.5e-07 57.8 134 32.8
Gohir.D05G073600 Gossypium hirsutum HOM05D000542 ORTHO05D000202 7.5e-07 57.8 140 32.9
Hma1.2p1_0003F.1_g003730 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 7.5e-07 57.8 152 32.9
Hma1.2p1_0450F.1_g155650 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 7.5e-07 57.8 152 34.9
Manes.03G125551 Manihot esculenta HOM05D000542 ORTHO05D000202 7.5e-07 57.8 130 34.6
Prupe.4G257600 Prunus persica HOM05D000542 ORTHO05D000202 7.5e-07 57.8 138 34.1
Solyc01g109500.4 Solanum lycopersicum HOM05D000542 ORTHO05D000202 7.5e-07 57.8 65 44.6
Atru.chr7.2289 Acer truncatum HOM05D000542 ORTHO05D000202 9.7e-07 57.4 141 34.0
Cc08_g08910 Coffea canephora HOM05D000542 ORTHO05D000202 9.7e-07 57.4 128 35.9
Manes.10G047800 Manihot esculenta HOM05D000542 ORTHO05D000202 9.7e-07 57.4 69 42.0
Sopen01g051690 Solanum pennellii HOM05D000542 ORTHO05D000202 9.7e-07 57.4 65 44.6
COL.COLO4_36491 Corchorus olitorius HOM05D000542 ORTHO05D000202 1.3e-06 57.0 133 33.8
Gorai.009G074500 Gossypium raimondii HOM05D000542 ORTHO05D000202 1.3e-06 57.0 140 32.9
MD05G1068000 Malus domestica HOM05D000542 ORTHO05D000202 1.3e-06 57.0 69 43.5
Manes.03G126301 Manihot esculenta HOM05D000542 ORTHO05D000202 1.3e-06 57.0 139 33.1
RcHm_v2.0_Chr5g0051031 Rosa chinensis HOM05D000542 ORTHO05D000202 1.3e-06 57.0 66 48.5
PGSC0003DMG400025192 Solanum tuberosum HOM05D000542 ORTHO05D000202 1.3e-06 57.0 65 44.6
Actinidia14658 Actinidia chinensis HOM05D000542 ORTHO05D000202 1.7e-06 56.6 163 29.4
ECA233G3460 Erigeron canadensis HOM05D000002 ORTHO05D000001 1.7e-06 56.6 144 31.9
Manes.16G066600 Manihot esculenta HOM05D000542 ORTHO05D000202 1.7e-06 56.6 149 31.5
Actinidia14657 Actinidia chinensis HOM05D000542 ORTHO05D000202 2.2e-06 56.2 168 29.2
CSS0015194 Camellia sinensis var. sinensis HOM05D000542 ORTHO05D000202 2.2e-06 56.2 147 29.9
CAN.G322.123 Capsicum annuum HOM05D000542 ORTHO05D000202 2.2e-06 56.2 65 46.2
AUR62009353 Chenopodium quinoa HOM05D000542 ORTHO05D000202 2.2e-06 56.2 66 45.5
ECA233G6163 Erigeron canadensis HOM05D000542 ORTHO05D000202 2.2e-06 56.2 148 30.4
FAN15G1534 Fragaria x ananassa HOM05D000542 ORTHO05D000202 2.8e-06 55.8 70 42.9
Hma1.2p1_0066F.1_g036520 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 2.8e-06 55.8 66 47.0
Hma1.2p1_0066F.1_g036565 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 2.8e-06 55.8 66 47.0
Manes.03G125200 Manihot esculenta HOM05D000542 ORTHO05D000202 2.8e-06 55.8 133 33.8
Manes.03G128100 Manihot esculenta HOM05D000542 ORTHO05D000202 2.8e-06 55.8 129 34.9
Peaxi162Scf00016g00087 Petunia axillaris HOM05D000542 ORTHO05D000202 2.8e-06 55.8 69 42.0
Sabra04G0081900 Salix brachista HOM05D000542 ORTHO05D000202 2.8e-06 55.8 130 31.5
arahy.Tifrunner.gnm1.ann1.04D7UL Arachis hypogaea HOM05D000542 ORTHO05D000202 3.7e-06 55.5 132 34.1
Cc08_g08800 Coffea canephora HOM05D000542 ORTHO05D000202 3.7e-06 55.5 123 32.5
Hma1.2p1_0066F.1_g036585 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 3.7e-06 55.5 94 39.4
Manes.03G125700 Manihot esculenta HOM05D000542 ORTHO05D000202 3.7e-06 55.5 137 33.6
Os05g0215000 Oryza sativa ssp. japonica HOM05D000542 ORTHO05D000202 3.7e-06 55.5 122 32.8
TAR628G1303 Trochodendron aralioides HOM05D000542 ORTHO05D000202 3.7e-06 55.5 66 43.9
unitig_748.g8216 Utricularia gibba HOM05D000542 ORTHO05D000202 3.7e-06 55.5 66 50.0
GSVIVG01035693001 Vitis vinifera HOM05D000542 ORTHO05D000202 3.7e-06 55.5 129 31.0
CiPaw.06G136600 Carya illinoinensis HOM05D000542 ORTHO05D000202 4.8e-06 55.1 69 43.5
DCAR_004509 Daucus carota HOM05D000542 ORTHO05D000202 4.8e-06 55.1 140 31.4
PGSC0003DMG400014509 Solanum tuberosum HOM05D000542 ORTHO05D000202 4.8e-06 55.1 67 46.3
Thecc.09G038800 Theobroma cacao HOM05D000542 ORTHO05D000202 4.8e-06 55.1 174 27.6
CiPaw.05G063400 Carya illinoinensis HOM05D000542 ORTHO05D000202 6.3e-06 54.7 69 40.6
Cc07_g14580 Coffea canephora HOM05D000542 ORTHO05D000202 6.3e-06 54.7 67 43.3
Gohir.A05G070600 Gossypium hirsutum HOM05D000542 ORTHO05D000202 6.3e-06 54.7 140 32.1
Hma1.2p1_0066F.1_g036550 Hydrangea macrophylla HOM05D000542 ORTHO05D000202 6.3e-06 54.7 94 39.4
TAR628G0639 Trochodendron aralioides HOM05D000542 ORTHO05D000202 6.3e-06 54.7 66 43.9
unitig_37.g12220 Utricularia gibba HOM05D000542 ORTHO05D000202 6.3e-06 54.7 66 48.5
vmacro05356 Vaccinium macrocarpon HOM05D000542 ORTHO05D000202 6.3e-06 54.7 66 47.0
CiPaw.05G063300 Carya illinoinensis HOM05D000542 ORTHO05D000202 8.2e-06 54.3 66 43.9
Prupe.1G453700 Prunus persica HOM05D000542 ORTHO05D000202 8.2e-06 54.3 121 31.4
PGR044G1623 Punica granatum HOM05D000542 ORTHO05D000202 8.2e-06 54.3 166 31.3


User provided reference genes

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