Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 0.0e+00 1189.1 651 100.0
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 3.7e-184 649.0 595 61.7
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 1.9e-175 620.2 577 60.0
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 4.3e-172 609.0 590 54.4
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 1.2e-171 607.4 548 60.8
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 3.1e-170 602.8 562 60.1
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 1.7e-168 597.0 552 58.2
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 1.7e-168 597.0 548 58.2
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 3.8e-168 595.9 567 57.1
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 4.6e-166 589.0 614 54.2
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 7.8e-166 588.2 616 56.3
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 1.3e-165 587.4 559 60.3
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 1.3e-165 587.4 550 57.5
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 8.6e-165 584.7 582 56.4
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 1.1e-164 584.3 490 60.6
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 1.9e-164 583.6 549 56.5
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 4.3e-164 582.4 571 53.1
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 7.3e-164 581.6 566 53.5
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 2.1e-163 580.1 577 55.3
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 3.6e-163 579.3 583 56.9
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 4.7e-163 578.9 543 58.2
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 4.7e-163 578.9 584 55.5
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 6.2e-163 578.6 578 58.0
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 1.1e-162 577.8 538 61.2
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 1.4e-162 577.4 552 55.1
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 5.2e-162 575.5 559 57.6
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 5.2e-162 575.5 553 57.7
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 1.2e-161 574.3 607 57.7
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 2.0e-161 573.5 585 54.7
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 4.4e-161 572.4 564 59.4
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 9.9e-161 571.2 591 52.1
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 9.9e-161 571.2 584 55.1
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 6.4e-160 568.5 566 59.7
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 2.4e-159 566.6 586 54.4
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 3.2e-159 566.2 556 54.7
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 4.2e-159 565.8 548 59.5
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 5.4e-159 565.5 626 53.5
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 7.1e-159 565.1 630 55.4
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 7.1e-159 565.1 559 55.6
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 7.1e-159 565.1 548 59.3
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 2.7e-158 563.1 548 54.0
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 2.7e-158 563.1 562 57.1
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 3.5e-158 562.8 552 57.1
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 3.5e-158 562.8 624 54.0
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 7.8e-158 561.6 555 59.8
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 1.7e-157 560.5 612 53.3
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.1e-156 557.8 555 57.8
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 1.5e-156 557.4 552 59.4
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 2.5e-156 556.6 538 58.9
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 9.6e-156 554.7 548 57.5
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 9.6e-156 554.7 542 60.3
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 2.8e-155 553.1 535 56.3
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 3.6e-155 552.7 603 51.1
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 1.4e-154 550.8 501 59.7
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 4.0e-154 549.3 615 51.4
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 5.3e-154 548.9 613 49.4
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 6.9e-154 548.5 579 52.8
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 9.0e-154 548.1 613 49.3
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 7.6e-153 545.0 613 49.1
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 9.3e-151 538.1 559 53.3
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 1.2e-150 537.7 595 53.6
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 1.2e-150 537.7 551 55.4
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 2.1e-150 537.0 546 59.2
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 3.5e-150 536.2 550 53.8
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 3.9e-149 532.7 611 50.1
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 1.6e-147 527.3 575 51.0
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 1.6e-147 527.3 598 51.0
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 2.1e-147 526.9 553 53.7
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 3.7e-147 526.2 575 50.4
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 3.7e-147 526.2 575 50.4
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 1.4e-146 524.2 621 49.8
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 2.4e-146 523.5 556 53.2
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 4.0e-146 522.7 575 52.2
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 4.0e-146 522.7 599 48.7
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 4.0e-146 522.7 559 51.9
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 9.0e-146 521.5 562 53.4
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 9.9e-145 518.1 628 49.8
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 2.2e-144 516.9 556 51.4
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 1.1e-143 514.6 551 52.3
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 3.2e-143 513.1 558 52.3
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 4.2e-143 512.7 648 48.6
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 1.2e-142 511.1 559 55.6
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 1.6e-142 510.8 657 44.1
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 2.7e-142 510.0 553 51.2
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 2.7e-142 510.0 377 67.9
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 3.5e-142 509.6 557 49.6
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 4.6e-142 509.2 564 51.2
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 6.0e-142 508.8 559 52.4
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 1.8e-141 507.3 559 51.7
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 6.2e-139 498.8 580 49.7
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 9.0e-138 495.0 623 46.7
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 6.5e-136 488.8 540 50.4
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 2.5e-132 476.9 609 46.1
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 1.0e-128 464.9 554 46.2
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 4.3e-124 449.5 320 63.1
FAN25G0567 Fragaria x ananassa HOM05D006614 ORTHO05D008217 1.4e-122 444.5 611 46.2
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 4.1e-122 443.0 558 46.2
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 9.4e-119 431.8 581 44.1
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 1.0e-117 428.3 427 59.7
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 1.9e-111 407.5 373 52.0
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 2.1e-86 324.3 487 39.2
Ciclev10023881m.g Citrus clementina HOM05D006614 ORTHO05D008217 1.3e-75 288.5 349 47.9
Glyma.02G250300 Glycine max HOM05D006614 ORTHO05D008217 3.3e-71 273.9 346 52.6
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 8.1e-46 189.5 471 35.7
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 1.2e-44 185.7 455 34.1
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 4.2e-42 177.2 469 35.6
Mapoly0097s0086 Marchantia polymorpha HOM05D006614 ORTHO05D008217 5.4e-42 176.8 240 35.8
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 5.4e-42 176.8 482 36.7
Cfa009322 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.6e-30 138.7 87 70.1
MD11G1263800 Malus domestica HOM05D006614 ORTHO05D008217 5.8e-28 130.2 90 60.0
CBR_g47994 Chara braunii HOM05D006614 ORTHO05D008217 3.8e-19 100.9 231 28.1
HPP92_015860 Vanilla planifolia HOM05D006614 ORTHO05D008217 3.2e-18 97.8 58 74.1
Cfa001947 Carpinus fangiana HOM05D006614 ORTHO05D008217 5.5e-18 97.1 57 75.4
Dinv02793 Davidia involucrata HOM05D006614 ORTHO05D008217 4.3e-15 87.4 84 56.0
Aqoxy3G00115 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 5.9e-12 77.0 40 85.0
FAN21G3229 Fragaria x ananassa HOM05D006614 ORTHO05D008217 1.6e-09 68.9 57 63.2
Psat0s3066g0040 Pisum sativum HOM05D006614 ORTHO05D008217 2.7e-09 68.2 57 57.9
ATR0810G173 Amborella trichopoda HOM05D057060 ORTHO05D008217 8.8e-08 63.2 129 41.1


User provided reference genes

Program Settings