Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0807G228 Amborella trichopoda HOM05D007302 ORTHO05D009191 2.0e-59 232.3 122 100.0
TAR369G0332 Trochodendron aralioides HOM05D007302 ORTHO05D009191 3.0e-34 148.7 102 75.5
TAR369G0850 Trochodendron aralioides HOM05D007302 ORTHO05D009191 3.0e-34 148.7 102 75.5
vmacro13612 Vaccinium macrocarpon HOM05D007302 ORTHO05D009191 2.5e-33 145.6 104 75.0
MBI08_g23101_MAGBIO Magnolia biondii HOM05D007302 ORTHO05D009191 3.3e-33 145.2 97 77.3
Manes.10G151800 Manihot esculenta HOM05D007302 ORTHO05D009191 2.8e-32 142.1 104 72.1
FAN06G3306 Fragaria x ananassa HOM05D007302 ORTHO05D009191 3.6e-32 141.7 101 71.3
FAN10G3108 Fragaria x ananassa HOM05D007302 ORTHO05D009191 3.6e-32 141.7 101 71.3
QL04p001433 Quercus lobata HOM05D007302 ORTHO05D009191 3.6e-32 141.7 102 71.6
SalBow4G1665 Salvia bowleyana HOM05D007302 ORTHO05D009191 3.6e-32 141.7 102 70.6
SalBow4G2255 Salvia bowleyana HOM05D007302 ORTHO05D009191 3.6e-32 141.7 102 70.6
RcHm_v2.0_Chr1g0313291 Rosa chinensis HOM05D007302 ORTHO05D009191 4.7e-32 141.4 102 71.6
Ca_02882_v3 Cicer arietinum L. HOM05D007302 ORTHO05D009191 6.2e-32 141.0 104 70.2
Actinidia05847 Actinidia chinensis HOM05D007302 ORTHO05D009191 8.1e-32 140.6 97 76.3
Actinidia31711 Actinidia chinensis HOM05D007302 ORTHO05D009191 8.1e-32 140.6 96 76.0
DCAR_015712 Daucus carota HOM05D007302 ORTHO05D009191 8.1e-32 140.6 103 70.9
Haze_03286 Corylus avellana HOM05D007302 ORTHO05D009191 1.1e-31 140.2 97 75.3
FAN03G0504 Fragaria x ananassa HOM05D007302 ORTHO05D009191 1.1e-31 140.2 102 69.6
MD07G1001600 Malus domestica HOM05D007302 ORTHO05D009191 1.1e-31 140.2 102 69.6
Actinidia25680 Actinidia chinensis HOM05D007302 ORTHO05D009191 1.4e-31 139.8 93 77.4
Glyma.15G268700 Glycine max HOM05D007302 ORTHO05D009191 1.4e-31 139.8 104 68.3
PSO384G4593 Papaver somniferum HOM05D007302 ORTHO05D009191 1.4e-31 139.8 102 72.5
Migut.N01659 Erythranthe guttata HOM05D007302 ORTHO05D009191 3.1e-31 138.7 104 65.4
Migut.O00474 Erythranthe guttata HOM05D007302 ORTHO05D009191 3.1e-31 138.7 104 65.4
PSO339G0269 Papaver somniferum HOM05D007302 ORTHO05D009191 4.0e-31 138.3 102 71.6
Rhsim07G0050000 Rhododendron simsii HOM05D007302 ORTHO05D009191 4.0e-31 138.3 97 74.2
Cfa010688 Carpinus fangiana HOM05D007302 ORTHO05D009191 5.2e-31 137.9 97 74.2
CsaV3_7G031460 Cucumis sativus L. HOM05D007302 ORTHO05D009191 5.2e-31 137.9 104 68.3
Phvul.005G041100 Phaseolus vulgaris HOM05D007302 ORTHO05D009191 5.2e-31 137.9 104 66.3
MSTRG.28098 Avicennia marina HOM05D007302 ORTHO05D009191 6.8e-31 137.5 102 67.6
CANSAT11G0176 Cannabis sativa HOM05D007302 ORTHO05D009191 6.8e-31 137.5 97 72.2
FvH4_7g00100 Fragaria vesca HOM05D007302 ORTHO05D009191 6.8e-31 137.5 92 77.2
Gohir.A08G026680 Gossypium hirsutum HOM05D007302 ORTHO05D009191 6.8e-31 137.5 101 72.3
Potri.001G230100 Populus trichocarpa HOM05D007302 ORTHO05D009191 6.8e-31 137.5 97 72.2
QL04p001298 Quercus lobata HOM05D007302 ORTHO05D009191 6.8e-31 137.5 116 63.8
THA.LOC104817151 Tarenaya hassleriana HOM05D007302 ORTHO05D009191 6.8e-31 137.5 102 68.6
GSVIVG01001360001 Vitis vinifera HOM05D007302 ORTHO05D009191 6.8e-31 137.5 102 70.6
MELO3C023508.2 Cucumis melo HOM05D007302 ORTHO05D009191 8.9e-31 137.1 107 65.4
Lsat_1_v5_gn_1_87261 Lactuca sativa HOM05D007302 ORTHO05D009191 8.9e-31 137.1 102 71.6
Prupe.2G003100 Prunus persica HOM05D007302 ORTHO05D009191 8.9e-31 137.1 119 62.2
ECA248G3756 Erigeron canadensis HOM05D007302 ORTHO05D009191 1.2e-30 136.7 97 75.3
Medtr2g061420 Medicago truncatula HOM05D007302 ORTHO05D009191 1.2e-30 136.7 103 68.9
arahy.Tifrunner.gnm1.ann1.5U19IL Arachis hypogaea HOM05D007302 ORTHO05D009191 1.5e-30 136.3 102 69.6
arahy.Tifrunner.gnm1.ann1.Z7X15P Arachis hypogaea HOM05D007302 ORTHO05D009191 1.5e-30 136.3 102 69.6
TPR.G16161 Trifolium pratense HOM05D007302 ORTHO05D009191 1.5e-30 136.3 103 68.9
TWI09G1618 Tripterygium wilfordii HOM05D007302 ORTHO05D009191 1.5e-30 136.3 105 69.5
CSS0001542 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 2.0e-30 136.0 97 72.2
CSS0004707 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 2.0e-30 136.0 97 72.2
Cpa.g.sc189.6 Carica papaya HOM05D007302 ORTHO05D009191 2.0e-30 136.0 102 68.6
Thhalv10001676m.g Eutrema salsugineum HOM05D007302 ORTHO05D009191 2.6e-30 135.6 102 68.6
Gohir.D08G037201 Gossypium hirsutum HOM05D007302 ORTHO05D009191 2.6e-30 135.6 101 71.3
Gorai.004G035200 Gossypium raimondii HOM05D007302 ORTHO05D009191 2.6e-30 135.6 101 71.3
Sabra16G0137900 Salix brachista HOM05D007302 ORTHO05D009191 2.6e-30 135.6 94 72.3
unitig_736.g22290 Utricularia gibba HOM05D007302 ORTHO05D009191 2.6e-30 135.6 100 69.0
Psat1g127480 Pisum sativum HOM05D007302 ORTHO05D009191 3.4e-30 135.2 103 68.0
Sed0011752 Sechium edule HOM05D007302 ORTHO05D009191 3.4e-30 135.2 121 59.5
Aa31LG1G25940 Aethionema arabicum HOM05D007302 ORTHO05D009191 7.6e-30 134.0 102 67.6
Aqoxy1G00038 Aquilegia oxysepala HOM05D003342 ORTHO05D003861 9.9e-30 133.7 102 68.6
Ciclev10033063m.g Citrus clementina HOM05D007302 ORTHO05D009191 1.3e-29 133.3 104 67.3
Lj3g0023486 Lotus japonicus HOM05D007302 ORTHO05D009191 1.3e-29 133.3 104 66.3
Lj6g0025867 Lotus japonicus HOM05D007302 ORTHO05D009191 1.3e-29 133.3 104 66.3
VMungo1080G0568 Vigna mungo HOM05D007302 ORTHO05D009191 1.3e-29 133.3 104 64.4
AT2G44360 Arabidopsis thaliana HOM05D007302 ORTHO05D009191 2.2e-29 132.5 102 67.6
Nn2g15684 Nelumbo nucifera HOM05D007302 ORTHO05D009191 2.2e-29 132.5 102 65.7
Eucgr.G03411 Eucalyptus grandis HOM05D007302 ORTHO05D009191 3.8e-29 131.7 102 66.7
Thecc.01G416400 Theobroma cacao HOM05D007302 ORTHO05D009191 3.8e-29 131.7 97 71.1
CARHR139520 Cardamine hirsuta HOM05D007302 ORTHO05D009191 6.4e-29 131.0 102 65.7
Lalb_Chr25g0283591 Lupinus albus HOM05D007302 ORTHO05D009191 6.4e-29 131.0 97 70.1
Nn7g36009 Nelumbo nucifera HOM05D007302 ORTHO05D009191 6.4e-29 131.0 96 69.8
ClCG09G003750 Citrullus lanatus HOM05D007302 ORTHO05D009191 8.4e-29 130.6 107 65.4
Peaxi162Scf00245g01315 Petunia axillaris HOM05D007302 ORTHO05D009191 8.4e-29 130.6 102 66.7
PGSC0003DMG400028766 Solanum tuberosum HOM05D007302 ORTHO05D009191 8.4e-29 130.6 102 64.7
Carub.0004s2694 Capsella rubella HOM05D007302 ORTHO05D009191 1.1e-28 130.2 102 65.7
Sp4g26420 Schrenkiella parvula HOM05D007302 ORTHO05D009191 1.9e-28 129.4 102 65.7
Solyc10g045350.2 Solanum lycopersicum HOM05D007302 ORTHO05D009191 2.4e-28 129.0 102 64.7
Sopen10g014540 Solanum pennellii HOM05D007302 ORTHO05D009191 2.4e-28 129.0 102 64.7
BcaB06g29370 Brassica carinata HOM05D007302 ORTHO05D009191 4.2e-28 128.3 102 66.7
C04p70980 Brassica napus HOM05D007302 ORTHO05D009191 4.2e-28 128.3 102 66.7
BolC4t28601H Brassica oleracea HOM05D007302 ORTHO05D009191 4.2e-28 128.3 102 66.7
AL4G43340 Arabidopsis lyrata HOM05D007302 ORTHO05D009191 5.4e-28 127.9 98 67.3
Atru.chr11.2701 Acer truncatum HOM05D007302 ORTHO05D009191 9.3e-28 127.1 109 66.1
Duzib268G0295 Durio zibethinus HOM05D007302 ORTHO05D009191 9.3e-28 127.1 97 70.1
Sc11g0006270 Simmondsia chinensis HOM05D007302 ORTHO05D009191 9.3e-28 127.1 97 69.1
A04p33280 Brassica napus HOM05D007302 ORTHO05D009191 1.6e-27 126.3 102 64.7
BraA04t18789Z Brassica rapa HOM05D007302 ORTHO05D009191 1.6e-27 126.3 102 64.7
CiPaw.16G067000 Carya illinoinensis HOM05D007302 ORTHO05D009191 7.8e-27 124.0 104 63.5
CDE07G1496 Ceratophyllum demersum HOM05D007302 ORTHO05D009191 1.7e-26 122.9 102 59.8
Cc02_g26960 Coffea canephora HOM05D007302 ORTHO05D009191 5.1e-26 121.3 97 67.0
HanXRQChr15g0480631 Helianthus annuus HOM05D007302 ORTHO05D009191 6.6e-26 120.9 104 63.5
Hund06578 Selenicereus undatus HOM05D007302 ORTHO05D009191 7.3e-25 117.5 100 64.0
SGA_v2.0_scaffold95G28773 Striga asiatica HOM05D007302 ORTHO05D009191 2.1e-24 115.9 102 62.7
AUR62011558 Chenopodium quinoa HOM05D007302 ORTHO05D009191 6.2e-24 114.4 99 63.6
SEGI_27997 Sequoiadendron giganteum HOM05D007302 ORTHO05D009191 1.1e-23 113.6 101 58.4
EL10Ac9g21938 Beta vulgaris HOM05D007302 ORTHO05D009191 2.4e-23 112.5 100 63.0
AUR62016377 Chenopodium quinoa HOM05D007302 ORTHO05D009191 3.1e-23 112.1 95 66.3
CSS0017005 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 2.2e-21 105.9 98 59.2
COL.COLO4_25061 Corchorus olitorius HOM05D007302 ORTHO05D009191 3.5e-19 98.6 97 60.8
Dinv43937 Davidia involucrata HOM05D007302 ORTHO05D009191 3.9e-18 95.1 97 53.6
HPP92_022445 Vanilla planifolia HOM05D007302 ORTHO05D009191 5.1e-18 94.7 71 70.4
Pp3c17_19080 Physcomitrium patens HOM05D007302 ORTHO05D009191 2.5e-17 92.4 93 51.6
CSS0014571 Camellia sinensis var. sinensis HOM05D007302 ORTHO05D009191 1.3e-16 90.1 101 50.5
Oeu003126.2 Olea europaea HOM05D007302 ORTHO05D009191 4.8e-16 88.2 62 71.0
DCAR_024994 Daucus carota HOM05D007302 ORTHO05D009191 3.1e-15 85.5 88 56.8
Os09g0553800 Oryza sativa ssp. japonica HOM05D007302 ORTHO05D009191 1.5e-14 83.2 62 66.1
Mapoly0007s0266 Marchantia polymorpha HOM05D007302 ORTHO05D009191 6.4e-13 77.8 103 41.7
CBR_g22319 Chara braunii HOM05D000019 ORTHO05D000048 7.1e-12 74.3 93 39.8
MD05G1005700 Malus domestica HOM05D007302 ORTHO05D009191 3.5e-11 72.0 51 72.5
MD15G1336100 Malus domestica HOM05D007302 ORTHO05D009191 2.4e-07 59.3 43 65.1


User provided reference genes

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