Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0807G213 Amborella trichopoda HOM05D003427 ORTHO05D003927 6.4e-67 257.3 132 100.0
ATR0807G044 Amborella trichopoda HOM05D003427 ORTHO05D003927 6.5e-19 97.8 116 52.6
ATR0850G001 Amborella trichopoda HOM05D003427 ORTHO05D003927 9.4e-18 94.0 66 71.2
TWI74G0994 Tripterygium wilfordii HOM05D003427 ORTHO05D003927 4.5e-12 75.1 70 51.4
Cfa015981 Carpinus fangiana HOM05D003427 ORTHO05D003927 1.9e-10 69.7 61 54.1
TWI56G0570 Tripterygium wilfordii HOM05D003427 ORTHO05D003927 4.2e-10 68.6 65 49.2
Haze_00493 Corylus avellana HOM05D003427 ORTHO05D003927 5.5e-10 68.2 61 54.1
SEGI_06352 Sequoiadendron giganteum HOM05D003427 ORTHO05D003927 5.5e-10 68.2 71 47.9
TWI12G1192 Tripterygium wilfordii HOM05D003427 ORTHO05D003927 5.5e-10 68.2 65 49.2
GSVIVG01008915001 Vitis vinifera HOM05D003427 ORTHO05D003927 1.2e-09 67.0 61 50.8
Actinidia23060 Actinidia chinensis HOM05D003427 ORTHO05D003927 1.6e-09 66.6 62 51.6
Dinv27352 Davidia involucrata HOM05D003427 ORTHO05D003927 1.6e-09 66.6 62 46.8
SalBow7G2208 Salvia bowleyana HOM05D003427 ORTHO05D003927 2.7e-09 65.9 116 37.9
TAR381G1219 Trochodendron aralioides HOM05D003427 ORTHO05D003927 2.7e-09 65.9 61 50.8
Rhsim10G0043500 Rhododendron simsii HOM05D003427 ORTHO05D003927 4.7e-09 65.1 65 50.8
CANSAT56G1577 Cannabis sativa HOM05D003427 ORTHO05D003927 6.1e-09 64.7 61 50.8
CANSAT56G1611 Cannabis sativa HOM05D003427 ORTHO05D003927 6.1e-09 64.7 61 50.8
Lj4A597G14 Lonicera japonica HOM05D003427 ORTHO05D003927 6.1e-09 64.7 71 43.7
Thecc.08G120400 Theobroma cacao HOM05D003427 ORTHO05D003927 6.1e-09 64.7 61 49.2
EL10Ac1g00015 Beta vulgaris HOM05D003427 ORTHO05D003927 8.0e-09 64.3 61 49.2
PSO384G4155 Papaver somniferum HOM05D003427 ORTHO05D003927 8.0e-09 64.3 65 49.2
Os10g0567000 Oryza sativa ssp. japonica HOM05D003427 ORTHO05D003927 1.0e-08 63.9 70 51.4
Potri.002G086800 Populus trichocarpa HOM05D003427 ORTHO05D003927 1.0e-08 63.9 61 49.2
Zm00001eb390680 Zea mays HOM05D003427 ORTHO05D003927 1.0e-08 63.9 71 52.1
RhsimUnG0120600 Rhododendron simsii HOM05D003427 ORTHO05D003927 1.4e-08 63.5 61 52.5
Cc06_g13570 Coffea canephora HOM05D003427 ORTHO05D003927 1.8e-08 63.2 116 35.3
QL07p045468 Quercus lobata HOM05D003427 ORTHO05D003927 1.8e-08 63.2 61 49.2
Sed0011022 Sechium edule HOM05D003427 ORTHO05D003927 1.8e-08 63.2 65 47.7
SalBow7G0329 Salvia bowleyana HOM05D003427 ORTHO05D003927 2.3e-08 62.8 56 55.4
Aqoxy1G02472 Aquilegia oxysepala HOM05D003427 ORTHO05D003927 3.0e-08 62.4 61 49.2
AUR62004716 Chenopodium quinoa HOM05D003427 ORTHO05D003927 3.0e-08 62.4 61 49.2
AUR62023631 Chenopodium quinoa HOM05D003427 ORTHO05D003927 3.0e-08 62.4 61 49.2
AUR62036406 Chenopodium quinoa HOM05D003427 ORTHO05D003927 3.0e-08 62.4 61 49.2
AUR62036452 Chenopodium quinoa HOM05D003427 ORTHO05D003927 3.0e-08 62.4 61 49.2
Hma1.2p1_0009F.1_g006310 Hydrangea macrophylla HOM05D003427 ORTHO05D003927 3.0e-08 62.4 62 48.4
Sabra05G0131500 Salix brachista HOM05D003427 ORTHO05D003927 3.0e-08 62.4 61 49.2
Sabra05G0131700 Salix brachista HOM05D003427 ORTHO05D003927 3.0e-08 62.4 61 49.2
vmacro05626 Vaccinium macrocarpon HOM05D003427 ORTHO05D003927 3.0e-08 62.4 61 50.8
Atru.chr13.1391 Acer truncatum HOM05D003427 ORTHO05D003927 4.0e-08 62.0 61 49.2
CiPaw.05G226300 Carya illinoinensis HOM05D003427 ORTHO05D003927 4.0e-08 62.0 70 47.1
CiPaw.05G226400 Carya illinoinensis HOM05D003427 ORTHO05D003927 4.0e-08 62.0 66 53.0
Medtr3g072840 Medicago truncatula HOM05D003427 ORTHO05D003927 4.0e-08 62.0 60 50.0
SEGI_02547 Sequoiadendron giganteum HOM05D003427 ORTHO05D003927 4.0e-08 62.0 116 36.2
EL10Ac7g18243 Beta vulgaris HOM05D003427 ORTHO05D003927 5.2e-08 61.6 61 45.9
Lj4A597T12 Lonicera japonica HOM05D003427 ORTHO05D003927 5.2e-08 61.6 61 45.9
Potri.005G174600 Populus trichocarpa HOM05D003427 ORTHO05D003927 5.2e-08 61.6 61 49.2
MSTRG.1470 Avicennia marina HOM05D003427 ORTHO05D003927 6.7e-08 61.2 116 36.2
MSTRG.25396 Avicennia marina HOM05D003427 ORTHO05D003927 6.7e-08 61.2 62 50.0
CSS0043512 Camellia sinensis var. sinensis HOM05D003427 ORTHO05D003927 8.8e-08 60.8 61 47.5
CSS0048113 Camellia sinensis var. sinensis HOM05D003427 ORTHO05D003927 8.8e-08 60.8 61 47.5
QL04p060321 Quercus lobata HOM05D003427 ORTHO05D003927 8.8e-08 60.8 61 47.5
vmacro12551 Vaccinium macrocarpon HOM05D003427 ORTHO05D003927 8.8e-08 60.8 66 48.5
CSS0044236 Camellia sinensis var. sinensis HOM05D003427 ORTHO05D003927 1.2e-07 60.5 61 45.9
RcHm_v2.0_Chr6g0295111 Rosa chinensis HOM05D003427 ORTHO05D003927 1.2e-07 60.5 70 42.9
Hund16834 Selenicereus undatus HOM05D003427 ORTHO05D003927 1.2e-07 60.5 61 45.9
TAR381G0480 Trochodendron aralioides HOM05D003427 ORTHO05D003927 1.2e-07 60.5 61 47.5
Hund16838 Selenicereus undatus HOM05D003427 ORTHO05D003927 1.5e-07 60.1 61 45.9
vmacro20081 Vaccinium macrocarpon HOM05D003427 ORTHO05D003927 1.5e-07 60.1 65 47.7
ClCG03G009520 Citrullus lanatus HOM05D003427 ORTHO05D003927 2.0e-07 59.7 62 48.4
COL.COLO4_38335 Corchorus olitorius HOM05D003427 ORTHO05D003927 2.0e-07 59.7 66 42.4
Duzib116G0521 Durio zibethinus HOM05D003427 ORTHO05D003927 2.0e-07 59.7 60 50.0
Hund27042 Selenicereus undatus HOM05D003427 ORTHO05D003927 2.0e-07 59.7 61 42.6
Rhsim06G0106600 Rhododendron simsii HOM05D003427 ORTHO05D003927 2.6e-07 59.3 66 43.9
HPP92_012126 Vanilla planifolia HOM05D003427 ORTHO05D003927 2.6e-07 59.3 55 56.4
CAN.G134.189 Capsicum annuum HOM05D003427 ORTHO05D003927 3.3e-07 58.9 61 47.5
CsaV3_5G023150 Cucumis sativus L. HOM05D003427 ORTHO05D003927 3.3e-07 58.9 62 48.4
Lj1g0010808 Lotus japonicus HOM05D003427 ORTHO05D003927 3.3e-07 58.9 60 46.7
SGA_v2.0_scaffold24G10480 Striga asiatica HOM05D003427 ORTHO05D003927 3.3e-07 58.9 62 48.4
Ciclev10001037m.g Citrus clementina HOM05D003427 ORTHO05D003927 4.4e-07 58.5 61 47.5
Nitab4.5_0006276g0030 Nicotiana tabacum HOM05D003427 ORTHO05D003927 4.4e-07 58.5 62 46.8
BcaC02g12787 Brassica carinata HOM05D003427 ORTHO05D003927 5.7e-07 58.2 61 44.3
Hma1.2p1_0523F.1_g172050 Hydrangea macrophylla HOM05D003427 ORTHO05D003927 5.7e-07 58.2 62 46.8
Peaxi162Scf00402g00076 Petunia axillaris HOM05D003427 ORTHO05D003927 5.7e-07 58.2 62 48.4
Gohir.D06G043200 Gossypium hirsutum HOM05D003427 ORTHO05D003927 7.5e-07 57.8 56 51.8
Gorai.010G048400 Gossypium raimondii HOM05D003427 ORTHO05D003927 7.5e-07 57.8 56 51.8
Prupe.1G502900 Prunus persica HOM05D003427 ORTHO05D003927 7.5e-07 57.8 61 47.5
FvH4_2g26430 Fragaria vesca HOM05D003427 ORTHO05D003927 9.7e-07 57.4 61 44.3
FAN24G2254 Fragaria x ananassa HOM05D003427 ORTHO05D003927 9.7e-07 57.4 61 44.3
Hma1.2p1_0009F.1_g006283 Hydrangea macrophylla HOM05D003427 ORTHO05D003927 9.7e-07 57.4 62 48.4
C04p02870 Brassica napus HOM05D003427 ORTHO05D003927 1.3e-06 57.0 61 42.6
BolC4t21927H Brassica oleracea HOM05D003427 ORTHO05D003927 1.3e-06 57.0 61 42.6
FAN15G0165 Fragaria x ananassa HOM05D003427 ORTHO05D003927 1.3e-06 57.0 61 44.3
Manes.18G074712 Manihot esculenta HOM05D003427 ORTHO05D003927 1.3e-06 57.0 61 44.3
Nn5g28144 Nelumbo nucifera HOM05D003427 ORTHO05D003927 1.3e-06 57.0 61 44.3
Phvul.009G122400 Phaseolus vulgaris HOM05D003427 ORTHO05D003927 1.3e-06 57.0 60 45.0
TPR.G39483 Trifolium pratense HOM05D003427 ORTHO05D003927 1.3e-06 57.0 61 45.9
Ah.05g172210 Amaranthus hybridus HOM05D003427 ORTHO05D003927 2.2e-06 56.2 62 41.9
BcaNung06817 Brassica carinata HOM05D003427 ORTHO05D003927 2.2e-06 56.2 62 43.5
Gohir.A06G042200 Gossypium hirsutum HOM05D003427 ORTHO05D003927 2.2e-06 56.2 56 50.0
Sc01g0001400 Simmondsia chinensis HOM05D003427 ORTHO05D003927 2.2e-06 56.2 61 44.3
Lj3g0027376 Lotus japonicus HOM05D003427 ORTHO05D003927 2.8e-06 55.8 60 46.7
MD15G1354500 Malus domestica HOM05D003427 ORTHO05D003927 2.8e-06 55.8 60 46.7
Medtr3g007470 Medicago truncatula HOM05D003427 ORTHO05D003927 2.8e-06 55.8 61 47.5
SGA_v2.0_scaffold52G18992 Striga asiatica HOM05D003427 ORTHO05D003927 2.8e-06 55.8 61 45.9
ECA233G4311 Erigeron canadensis HOM05D001171 ORTHO05D006126 3.7e-06 55.5 62 48.4
Lalb_Chr23g0270911 Lupinus albus HOM05D003427 ORTHO05D003927 3.7e-06 55.5 64 42.2
Lalb_Chr23g0270941 Lupinus albus HOM05D003427 ORTHO05D003927 3.7e-06 55.5 64 42.2
A05p02420 Brassica napus HOM05D003427 ORTHO05D003927 4.8e-06 55.1 61 42.6
BraA05t19236Z Brassica rapa HOM05D003427 ORTHO05D003927 4.8e-06 55.1 61 42.6
Migut.C01159 Erythranthe guttata HOM05D003427 ORTHO05D003927 4.8e-06 55.1 62 43.5
MD05G1028200 Malus domestica HOM05D003427 ORTHO05D003927 4.8e-06 55.1 60 46.7
RcHm_v2.0_Chr6g0275211 Rosa chinensis HOM05D003427 ORTHO05D003927 4.8e-06 55.1 61 47.5
Sopen11g008180 Solanum pennellii HOM05D003427 ORTHO05D003927 4.8e-06 55.1 61 45.9
PGSC0003DMG400012073 Solanum tuberosum HOM05D003427 ORTHO05D003927 4.8e-06 55.1 61 45.9
Aa31LG1G23720 Aethionema arabicum HOM05D003427 ORTHO05D003927 6.3e-06 54.7 118 33.9
arahy.Tifrunner.gnm1.ann1.81342Q Arachis hypogaea HOM05D003427 ORTHO05D003927 6.3e-06 54.7 64 43.8
Thhalv10016628m.g Eutrema salsugineum HOM05D003427 ORTHO05D003927 6.3e-06 54.7 61 42.6
Lalb_Chr11g0065761 Lupinus albus HOM05D003427 ORTHO05D003927 6.3e-06 54.7 64 43.8
AL4G40010 Arabidopsis lyrata HOM05D003427 ORTHO05D003927 8.2e-06 54.3 61 42.6


User provided reference genes

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