Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0807G196 Amborella trichopoda HOM05D005313 ORTHO05D006317 1.1e-99 366.7 192 100.0
Thecc.02G280500 Theobroma cacao HOM05D005313 ORTHO05D006317 1.1e-83 313.5 192 82.8
CDE05G1915 Ceratophyllum demersum HOM05D005313 ORTHO05D006317 2.4e-83 312.4 192 82.3
GSVIVG01011763001 Vitis vinifera HOM05D005313 ORTHO05D006317 2.4e-83 312.4 192 82.3
Gohir.A01G152800 Gossypium hirsutum HOM05D005313 ORTHO05D006317 5.4e-83 311.2 192 82.3
Hund08629 Selenicereus undatus HOM05D005313 ORTHO05D006317 5.4e-83 311.2 192 80.7
TAR623G0220 Trochodendron aralioides HOM05D005313 ORTHO05D006317 5.4e-83 311.2 192 82.8
PGR119G0894 Punica granatum HOM05D005313 ORTHO05D006317 9.3e-83 310.5 192 81.8
Gorai.002G179900 Gossypium raimondii HOM05D005313 ORTHO05D006317 1.2e-82 310.1 192 81.2
QL01p001863 Quercus lobata HOM05D005313 ORTHO05D006317 1.2e-82 310.1 191 81.7
Sc14g0007170 Simmondsia chinensis HOM05D005313 ORTHO05D006317 1.6e-82 309.7 192 81.2
Nitab4.5_0000742g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 2.1e-82 309.3 192 82.8
Potri.008G128900 Populus trichocarpa HOM05D005313 ORTHO05D006317 2.7e-82 308.9 192 80.7
SalBow4G0219 Salvia bowleyana HOM05D005313 ORTHO05D006317 2.7e-82 308.9 192 81.2
Sed0021241 Sechium edule HOM05D005313 ORTHO05D006317 7.9e-82 307.4 192 80.7
TWI31G1405 Tripterygium wilfordii HOM05D005313 ORTHO05D006317 7.9e-82 307.4 192 80.7
Gohir.D01G145600 Gossypium hirsutum HOM05D005313 ORTHO05D006317 1.3e-81 306.6 192 80.7
PSO384G2037 Papaver somniferum HOM05D005313 ORTHO05D006317 1.3e-81 306.6 192 81.2
Peaxi162Scf00159g00112 Petunia axillaris HOM05D005313 ORTHO05D006317 1.8e-81 306.2 192 81.8
Atru.chr9.122 Acer truncatum HOM05D005313 ORTHO05D006317 2.3e-81 305.8 192 79.7
CSS0048776 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 2.3e-81 305.8 192 81.8
COL.COLO4_20475 Corchorus olitorius HOM05D005313 ORTHO05D006317 2.3e-81 305.8 192 81.2
Nitab4.5_0004816g0010 Nicotiana tabacum HOM05D005313 ORTHO05D006317 3.0e-81 305.4 192 81.8
CAN.G1334.2 Capsicum annuum HOM05D005313 ORTHO05D006317 3.9e-81 305.1 192 80.7
Lj6A747T68 Lonicera japonica HOM05D005313 ORTHO05D006317 3.9e-81 305.1 192 81.8
Peaxi162Scf00450g00614 Petunia axillaris HOM05D005313 ORTHO05D006317 3.9e-81 305.1 192 81.2
Sopen05g004020 Solanum pennellii HOM05D005313 ORTHO05D006317 3.9e-81 305.1 192 81.2
Cc11_g08770 Coffea canephora HOM05D005313 ORTHO05D006317 1.1e-80 303.5 192 80.2
PSO339G3364 Papaver somniferum HOM05D005313 ORTHO05D006317 1.1e-80 303.5 192 80.2
Psat6g042560 Pisum sativum HOM05D005313 ORTHO05D006317 1.1e-80 303.5 192 79.7
Cfa008602 Carpinus fangiana HOM05D005313 ORTHO05D006317 1.5e-80 303.1 192 80.2
MELO3C018332.2 Cucumis melo HOM05D005313 ORTHO05D006317 1.5e-80 303.1 192 79.7
MSTRG.895 Avicennia marina HOM05D005313 ORTHO05D006317 1.9e-80 302.8 192 80.2
CsaV3_5G013570 Cucumis sativus L. HOM05D005313 ORTHO05D006317 1.9e-80 302.8 192 79.7
Lj2g0003652 Lotus japonicus HOM05D005313 ORTHO05D006317 1.9e-80 302.8 192 79.2
Lalb_Chr17g0338641 Lupinus albus HOM05D005313 ORTHO05D006317 1.9e-80 302.8 192 79.2
Solyc05g008180.3 Solanum lycopersicum HOM05D005313 ORTHO05D006317 1.9e-80 302.8 192 80.7
CANSAT01G3269 Cannabis sativa HOM05D005313 ORTHO05D006317 2.5e-80 302.4 192 79.2
PGSC0003DMG400030501 Solanum tuberosum HOM05D005313 ORTHO05D006317 2.5e-80 302.4 192 81.2
MD16G1029000 Malus domestica HOM05D005313 ORTHO05D006317 3.3e-80 302.0 192 79.7
vmacro10642 Vaccinium macrocarpon HOM05D005313 ORTHO05D006317 4.3e-80 301.6 192 80.7
Os09g0553600 Oryza sativa ssp. japonica HOM05D005313 ORTHO05D006317 5.6e-80 301.2 192 79.2
Rhsim02G0199800 Rhododendron simsii HOM05D005313 ORTHO05D006317 5.6e-80 301.2 192 80.2
Eucgr.G02191 Eucalyptus grandis HOM05D005313 ORTHO05D006317 7.4e-80 300.8 192 79.2
AUR62017725 Chenopodium quinoa HOM05D005313 ORTHO05D006317 9.6e-80 300.4 192 78.1
HanXRQChr15g0488661 Helianthus annuus HOM05D005313 ORTHO05D006317 9.6e-80 300.4 192 79.7
Manes.17G006600 Manihot esculenta HOM05D005313 ORTHO05D006317 9.6e-80 300.4 192 78.6
Zm00001eb104420 Zea mays HOM05D005313 ORTHO05D006317 9.6e-80 300.4 192 78.1
EL10Ac7g15995 Beta vulgaris HOM05D005313 ORTHO05D006317 1.3e-79 300.1 192 77.6
Prupe.1G323900 Prunus persica HOM05D005313 ORTHO05D006317 1.3e-79 300.1 192 79.7
Glyma.09G118600 Glycine max HOM05D005313 ORTHO05D006317 1.6e-79 299.7 192 77.6
Carub.0005s0033 Capsella rubella HOM05D005313 ORTHO05D006317 2.1e-79 299.3 192 78.6
HPP92_025383 Vanilla planifolia HOM05D005313 ORTHO05D006317 2.1e-79 299.3 192 76.0
AL5G10310 Arabidopsis lyrata HOM05D005313 ORTHO05D006317 2.8e-79 298.9 192 78.6
CARHR143870 Cardamine hirsuta HOM05D005313 ORTHO05D006317 2.8e-79 298.9 192 79.2
Medtr1g030750 Medicago truncatula HOM05D005313 ORTHO05D006317 2.8e-79 298.9 192 78.6
ECA246G2448 Erigeron canadensis HOM05D005313 ORTHO05D006317 3.7e-79 298.5 192 78.1
Glyma.02G238100 Glycine max HOM05D005313 ORTHO05D006317 3.7e-79 298.5 192 77.6
Phvul.003G023500 Phaseolus vulgaris HOM05D005313 ORTHO05D006317 4.8e-79 298.1 192 77.6
BcaB07g30404 Brassica carinata HOM05D005313 ORTHO05D006317 8.1e-79 297.4 192 77.6
Sp2g12800 Schrenkiella parvula HOM05D005313 ORTHO05D006317 8.1e-79 297.4 192 77.6
VMungo1215G0481 Vigna mungo HOM05D005313 ORTHO05D006317 8.1e-79 297.4 192 77.1
AT2G01350 Arabidopsis thaliana HOM05D005313 ORTHO05D006317 1.1e-78 297.0 192 78.6
Aa31LG2G8560 Aethionema arabicum HOM05D005313 ORTHO05D006317 1.8e-78 296.2 192 78.1
Aqoxy1G00025 Aquilegia oxysepala HOM05D005313 ORTHO05D006317 2.4e-78 295.8 192 79.2
RcHm_v2.0_Chr4g0441121 Rosa chinensis HOM05D005313 ORTHO05D006317 2.4e-78 295.8 192 78.6
Thhalv10000908m.g Eutrema salsugineum HOM05D005313 ORTHO05D006317 4.0e-78 295.0 192 77.1
Oeu024584.1 Olea europaea HOM05D005313 ORTHO05D006317 5.3e-78 294.7 210 74.8
Sabra08G0097700 Salix brachista HOM05D005313 ORTHO05D006317 6.9e-78 294.3 223 70.0
FvH4_4g32330 Fragaria vesca HOM05D005313 ORTHO05D006317 9.0e-78 293.9 192 78.1
FAN17G2517 Fragaria x ananassa HOM05D005313 ORTHO05D006317 9.0e-78 293.9 192 78.1
THA.LOC104805057 Tarenaya hassleriana HOM05D005313 ORTHO05D006317 1.2e-77 293.5 192 76.6
FAN22G0311 Fragaria x ananassa HOM05D005313 ORTHO05D006317 1.5e-77 293.1 192 77.6
A02p31910 Brassica napus HOM05D005313 ORTHO05D006317 5.8e-77 291.2 192 76.0
BraA02t08201Z Brassica rapa HOM05D005313 ORTHO05D006317 5.8e-77 291.2 192 76.0
C02p49400 Brassica napus HOM05D005313 ORTHO05D006317 1.3e-76 290.0 192 76.0
BolC2t11026H Brassica oleracea HOM05D005313 ORTHO05D006317 1.3e-76 290.0 192 76.0
FAN07G2253 Fragaria x ananassa HOM05D005313 ORTHO05D006317 2.2e-76 289.3 192 77.1
BcaC03g17029 Brassica carinata HOM05D005313 ORTHO05D006317 3.8e-76 288.5 192 75.5
BcaC03g17031 Brassica carinata HOM05D005313 ORTHO05D006317 3.8e-76 288.5 192 75.5
ClCG07G006260 Citrullus lanatus HOM05D005313 ORTHO05D006317 4.9e-76 288.1 181 79.0
AUR62032955 Chenopodium quinoa HOM05D005313 ORTHO05D006317 6.4e-76 287.7 220 69.5
Pp3c8_18030 Physcomitrium patens HOM05D005313 ORTHO05D006317 1.1e-75 287.0 192 75.0
Ca_25713_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 1.0e-73 280.4 226 65.9
Lsat_1_v5_gn_3_54641 Lactuca sativa HOM05D005313 ORTHO05D006317 1.0e-73 280.4 192 73.4
Ah.01g012630 Amaranthus hybridus HOM05D005313 ORTHO05D006317 1.1e-72 276.9 189 75.7
Zm00001eb320780 Zea mays HOM05D005313 ORTHO05D006317 3.7e-71 271.9 214 65.4
SMO164G0169 Selaginella moellendorffii HOM05D005313 ORTHO05D006317 4.5e-69 265.0 192 70.8
Duzib248G1582 Durio zibethinus HOM05D005313 ORTHO05D006317 2.9e-68 262.3 174 78.2
Dinv17424 Davidia involucrata HOM05D005313 ORTHO05D006317 7.1e-67 257.7 159 81.1
SalBow4G0808 Salvia bowleyana HOM05D005313 ORTHO05D006317 7.1e-67 257.7 159 80.5
Mapoly0011s0070 Marchantia polymorpha HOM05D005313 ORTHO05D006317 9.3e-67 257.3 180 71.1
Dinv05167 Davidia involucrata HOM05D005313 ORTHO05D006317 1.6e-66 256.5 166 78.9
Haze_11011 Corylus avellana HOM05D005313 ORTHO05D006317 2.7e-66 255.8 159 79.2
SEGI_23840 Sequoiadendron giganteum HOM05D005313 ORTHO05D006317 3.0e-65 252.3 160 78.1
CBR_g30917 Chara braunii HOM05D005313 ORTHO05D006317 8.7e-65 250.8 193 68.9
FAN12G1743 Fragaria x ananassa HOM05D005313 ORTHO05D006317 4.3e-64 248.4 165 77.0
SGA_v2.0_scaffold50G18517 Striga asiatica HOM05D005313 ORTHO05D006317 1.3e-63 246.9 192 69.3
unitig_0.g2330 Utricularia gibba HOM05D005313 ORTHO05D006317 1.6e-63 246.5 192 69.3
AagrBONN_evm.TU.Sc2ySwM_117.3802 Anthoceros agrestis HOM05D005313 ORTHO05D006317 2.0e-61 239.6 183 66.7
Cpa.g.sc65.129 Carica papaya HOM05D005313 ORTHO05D006317 8.5e-60 234.2 192 67.2
Ciclev10018157m.g Citrus clementina HOM05D005313 ORTHO05D006317 8.5e-60 234.2 146 78.8
Duzib248G1474 Durio zibethinus HOM05D005313 ORTHO05D006317 4.3e-56 221.9 139 79.1
CiPaw.06G012200 Carya illinoinensis HOM05D005313 ORTHO05D006317 3.7e-55 218.8 137 78.8
SHI04677 Sapria himalayana HOM05D005313 ORTHO05D006317 1.5e-53 213.4 154 70.8
DCAR_023608 Daucus carota HOM05D005313 ORTHO05D006317 2.6e-53 212.6 138 76.1
Migut.L00987 Erythranthe guttata HOM05D005313 ORTHO05D006317 7.7e-53 211.1 137 74.5
Nn2g15695 Nelumbo nucifera HOM05D005313 ORTHO05D006317 8.5e-52 207.6 192 62.5
MCO15G382 Micromonas commoda HOM05D005313 ORTHO05D006317 1.8e-49 199.9 180 58.3
PRCOL_00006420 Prasinoderma coloniale HOM05D005313 ORTHO05D006317 3.1e-46 189.1 185 58.4
Cre02.g141200 Chlamydomonas reinhardtii HOM05D005313 ORTHO05D006317 9.1e-46 187.6 180 57.2
arahy.Tifrunner.gnm1.ann1.Y1EHRK Arachis hypogaea HOM05D005313 ORTHO05D006317 1.2e-45 187.2 192 55.7
arahy.Tifrunner.gnm1.ann1.G5QWBZ Arachis hypogaea HOM05D005313 ORTHO05D006317 1.1e-43 180.6 201 53.7
Oeu045874.1 Olea europaea HOM05D005313 ORTHO05D006317 4.1e-30 135.6 140 57.9
CsaV3_UNG236450 Cucumis sativus L. HOM05D005313 ORTHO05D006317 4.5e-29 132.1 84 77.4
COL.COLO4_10085 Corchorus olitorius HOM05D005313 ORTHO05D006317 6.5e-28 128.3 85 69.4
Ca_12605_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 1.9e-27 126.7 79 77.2
TPR.G36891 Trifolium pratense HOM05D005313 ORTHO05D006317 2.1e-26 123.2 101 65.3
Ca_31307_v3 Cicer arietinum L. HOM05D005313 ORTHO05D006317 5.2e-25 118.6 158 41.1
Potri.010G113500 Populus trichocarpa HOM05D005313 ORTHO05D006317 5.7e-24 115.2 69 76.8
Sabra10G0083500 Salix brachista HOM05D005313 ORTHO05D006317 7.5e-24 114.8 124 51.6
A06p44480 Brassica napus HOM05D005313 ORTHO05D006317 1.3e-23 114.0 187 42.2
Glyma.07G165500 Glycine max HOM05D005313 ORTHO05D006317 1.3e-23 114.0 81 70.4
Actinidia26811 Actinidia chinensis HOM05D005313 ORTHO05D006317 8.3e-23 111.3 79 70.9
CSS0042289 Camellia sinensis var. sinensis HOM05D005313 ORTHO05D006317 1.2e-18 97.4 79 65.8
MBI06_g07791_MAGBIO Magnolia biondii HOM05D000155 ORTHO05D000022 2.3e-17 93.2 59 81.4
Migut.L00982 Erythranthe guttata HOM05D005313 ORTHO05D006317 5.2e-17 92.0 137 42.3
CsaV3_UNG236470 Cucumis sativus L. HOM05D005313 ORTHO05D006317 6.8e-17 91.7 63 69.8
CAN.G1020.2 Capsicum annuum HOM05D005313 ORTHO05D006317 2.6e-16 89.7 113 46.0
Actinidia14964 Actinidia chinensis HOM05D005313 ORTHO05D006317 7.5e-16 88.2 92 51.1
Aa31LG11G8270 Aethionema arabicum HOM05D005313 ORTHO05D006317 2.8e-15 86.3 88 55.7
BcaC06g31315 Brassica carinata HOM05D005313 ORTHO05D006317 2.3e-12 76.6 55 63.6


User provided reference genes

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