Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0807G118 Amborella trichopoda HOM05D007018 ORTHO05D008887 6.2e-85 317.4 157 100.0
Nn5g31007 Nelumbo nucifera HOM05D007018 ORTHO05D008887 1.3e-58 229.9 152 77.6
GSVIVG01013398001 Vitis vinifera HOM05D007018 ORTHO05D008887 1.7e-58 229.6 152 75.0
Sabra05G0196700 Salix brachista HOM05D007018 ORTHO05D008887 2.2e-58 229.2 154 74.0
Potri.005G253600 Populus trichocarpa HOM05D007018 ORTHO05D008887 5.0e-58 228.0 154 73.4
Gohir.D01G088700 Gossypium hirsutum HOM05D007018 ORTHO05D008887 3.2e-57 225.3 139 79.1
Actinidia17062 Actinidia chinensis HOM05D007018 ORTHO05D008887 4.2e-57 224.9 134 83.6
Rhsim06G0005000 Rhododendron simsii HOM05D007018 ORTHO05D008887 5.5e-57 224.6 144 77.1
Aqoxy6G01596 Aquilegia oxysepala HOM05D007018 ORTHO05D008887 7.2e-57 224.2 152 74.3
Gohir.A01G103400 Gossypium hirsutum HOM05D007018 ORTHO05D008887 9.3e-57 223.8 144 77.8
Duzib093G1136 Durio zibethinus HOM05D007018 ORTHO05D008887 1.2e-56 223.4 155 71.6
FAN18G2290 Fragaria x ananassa HOM05D007018 ORTHO05D008887 2.1e-56 222.6 150 72.7
Gorai.002G114400 Gossypium raimondii HOM05D007018 ORTHO05D008887 2.1e-56 222.6 139 78.4
CSS0014140 Camellia sinensis var. sinensis HOM05D007018 ORTHO05D008887 3.6e-56 221.9 157 72.6
CiPaw.08G075600 Carya illinoinensis HOM05D007018 ORTHO05D008887 3.6e-56 221.9 150 76.0
RcHm_v2.0_Chr7g0215941 Rosa chinensis HOM05D007018 ORTHO05D008887 3.6e-56 221.9 150 74.7
Dinv31968 Davidia involucrata HOM05D007018 ORTHO05D008887 4.6e-56 221.5 155 74.8
FvH4_5g25650 Fragaria vesca HOM05D007018 ORTHO05D008887 4.6e-56 221.5 150 72.0
Atru.chr13.101 Acer truncatum HOM05D007018 ORTHO05D008887 6.1e-56 221.1 146 73.3
CAN.G311.135 Capsicum annuum HOM05D007018 ORTHO05D008887 6.1e-56 221.1 152 74.3
CDE05G1284 Ceratophyllum demersum HOM05D007018 ORTHO05D008887 7.9e-56 220.7 135 79.3
PGR083G2064 Punica granatum HOM05D007018 ORTHO05D008887 1.0e-55 220.3 154 73.4
Sed0005335 Sechium edule HOM05D007018 ORTHO05D008887 1.3e-55 219.9 143 75.5
TAR633G0270 Trochodendron aralioides HOM05D007018 ORTHO05D008887 1.8e-55 219.5 134 81.3
Sabra02G0005900 Salix brachista HOM05D007018 ORTHO05D008887 2.3e-55 219.2 154 70.1
FAN04G0342 Fragaria x ananassa HOM05D007018 ORTHO05D008887 3.0e-55 218.8 150 73.3
TAR625G1418 Trochodendron aralioides HOM05D007018 ORTHO05D008887 3.0e-55 218.8 134 80.6
QL02p015150 Quercus lobata HOM05D007018 ORTHO05D008887 3.9e-55 218.4 153 72.5
TWI36G0062 Tripterygium wilfordii HOM05D007018 ORTHO05D008887 3.9e-55 218.4 147 73.5
CsaV3_4G037440 Cucumis sativus L. HOM05D007018 ORTHO05D008887 5.1e-55 218.0 134 79.1
Migut.C00367 Erythranthe guttata HOM05D007018 ORTHO05D008887 6.7e-55 217.6 152 70.4
Sc26g0004680 Simmondsia chinensis HOM05D007018 ORTHO05D008887 6.7e-55 217.6 155 72.3
DCAR_022937 Daucus carota HOM05D007018 ORTHO05D008887 1.1e-54 216.9 134 79.1
VMungo1309G2102 Vigna mungo HOM05D007018 ORTHO05D008887 1.5e-54 216.5 154 72.1
MELO3C017041.2 Cucumis melo HOM05D007018 ORTHO05D008887 1.9e-54 216.1 136 77.2
TPR.G38107 Trifolium pratense HOM05D007018 ORTHO05D008887 1.9e-54 216.1 154 70.1
Ciclev10002616m.g Citrus clementina HOM05D007018 ORTHO05D008887 2.5e-54 215.7 139 74.8
FAN08G2873 Fragaria x ananassa HOM05D007018 ORTHO05D008887 2.5e-54 215.7 150 71.3
Prupe.5G008700 Prunus persica HOM05D007018 ORTHO05D008887 3.3e-54 215.3 134 78.4
FAN13G0505 Fragaria x ananassa HOM05D007018 ORTHO05D008887 4.3e-54 214.9 150 72.0
SGA_v2.0_scaffold366G50030 Striga asiatica HOM05D007018 ORTHO05D008887 4.3e-54 214.9 152 70.4
HanXRQChr08g0216381 Helianthus annuus HOM05D007018 ORTHO05D008887 5.7e-54 214.5 151 70.9
ECA233G6114 Erigeron canadensis HOM05D000716 ORTHO05D002658 7.4e-54 214.2 151 68.9
Glyma.06G016200 Glycine max HOM05D007018 ORTHO05D008887 1.6e-53 213.0 154 72.1
Haze_22833 Corylus avellana HOM05D007018 ORTHO05D008887 2.2e-53 212.6 143 74.1
Medtr3g115880 Medicago truncatula HOM05D007018 ORTHO05D008887 2.2e-53 212.6 145 71.7
PSO541G4149 Papaver somniferum HOM05D007018 ORTHO05D008887 2.2e-53 212.6 154 70.1
Lsat_1_v5_gn_8_27360 Lactuca sativa HOM05D007018 ORTHO05D008887 2.8e-53 212.2 152 68.4
Lj1g0008636 Lotus japonicus HOM05D007018 ORTHO05D008887 2.8e-53 212.2 154 70.1
Psat5g009640 Pisum sativum HOM05D007018 ORTHO05D008887 6.3e-53 211.1 138 74.6
CANSAT25G2394 Cannabis sativa HOM05D007018 ORTHO05D008887 8.2e-53 210.7 156 71.2
ClCG11G018850 Citrullus lanatus HOM05D007018 ORTHO05D008887 8.2e-53 210.7 135 75.6
Hma1.2p1_0699F.1_g205550 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 8.2e-53 210.7 154 68.8
Lj4A809G49 Lonicera japonica HOM05D007018 ORTHO05D008887 8.2e-53 210.7 134 77.6
Eucgr.F01791 Eucalyptus grandis HOM05D007018 ORTHO05D008887 1.1e-52 210.3 154 70.1
MSTRG.993 Avicennia marina HOM05D007018 ORTHO05D008887 1.8e-52 209.5 144 74.3
MD06G1006600 Malus domestica HOM05D007018 ORTHO05D008887 2.4e-52 209.1 143 74.1
Sopen04g036220 Solanum pennellii HOM05D007018 ORTHO05D008887 3.1e-52 208.8 143 72.7
Phvul.009G006300 Phaseolus vulgaris HOM05D007018 ORTHO05D008887 4.1e-52 208.4 154 71.4
PGSC0003DMG400009913 Solanum tuberosum HOM05D007018 ORTHO05D008887 4.1e-52 208.4 152 68.4
Hma1.2p1_0699F.1_g205540 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 5.3e-52 208.0 149 69.1
Solyc04g082590.3 Solanum lycopersicum HOM05D007018 ORTHO05D008887 1.2e-51 206.8 148 70.3
SalBow7G2934 Salvia bowleyana HOM05D007018 ORTHO05D008887 1.5e-51 206.5 147 70.7
unitig_749.g13890 Utricularia gibba HOM05D007018 ORTHO05D008887 2.6e-51 205.7 141 68.8
Lalb_Chr11g0061471 Lupinus albus HOM05D007018 ORTHO05D008887 3.4e-51 205.3 151 69.5
HPP92_012484 Vanilla planifolia HOM05D007018 ORTHO05D008887 3.4e-51 205.3 152 65.1
Cc04_g01910 Coffea canephora HOM05D007018 ORTHO05D008887 1.3e-50 203.4 133 73.7
Peaxi162Scf00680g00121 Petunia axillaris HOM05D007018 ORTHO05D008887 1.3e-50 203.4 139 71.9
Thecc.08G062700 Theobroma cacao HOM05D007018 ORTHO05D008887 2.2e-50 202.6 137 74.5
Actinidia15510 Actinidia chinensis HOM05D007018 ORTHO05D008887 6.5e-50 201.1 136 76.5
Manes.18G003600 Manihot esculenta HOM05D007018 ORTHO05D008887 8.5e-50 200.7 154 70.8
AL1G51350 Arabidopsis lyrata HOM05D007018 ORTHO05D008887 1.6e-48 196.4 151 62.3
Carub.0001s3428 Capsella rubella HOM05D007018 ORTHO05D008887 1.6e-48 196.4 151 62.3
Thhalv10004993m.g Eutrema salsugineum HOM05D007018 ORTHO05D008887 3.6e-48 195.3 152 63.8
arahy.Tifrunner.gnm1.ann1.R1PR4F Arachis hypogaea HOM05D007018 ORTHO05D008887 6.1e-48 194.5 134 73.9
arahy.Tifrunner.gnm1.ann1.UKS4G3 Arachis hypogaea HOM05D007018 ORTHO05D008887 6.1e-48 194.5 134 73.9
AT1G42480 Arabidopsis thaliana HOM05D007018 ORTHO05D008887 7.9e-48 194.1 151 61.6
Os02g0117200 Oryza sativa ssp. japonica HOM05D007018 ORTHO05D008887 1.8e-47 193.0 134 68.7
Sp1g32030 Schrenkiella parvula HOM05D007018 ORTHO05D008887 1.8e-47 193.0 151 63.6
vmacro21785 Vaccinium macrocarpon HOM05D007018 ORTHO05D008887 1.8e-47 193.0 205 51.7
A08p07720 Brassica napus HOM05D007018 ORTHO05D008887 6.7e-47 191.0 151 62.3
BraA08t32785Z Brassica rapa HOM05D007018 ORTHO05D008887 6.7e-47 191.0 151 62.3
BcaB04g17781 Brassica carinata HOM05D007018 ORTHO05D008887 2.0e-46 189.5 139 66.2
CARHR292440 Cardamine hirsuta HOM05D007018 ORTHO05D008887 2.0e-46 189.5 152 63.2
Aa31sc108G20 Aethionema arabicum HOM05D007018 ORTHO05D008887 4.4e-46 188.3 141 63.1
BcaC07g37460 Brassica carinata HOM05D007018 ORTHO05D008887 4.4e-46 188.3 139 65.5
C08p09340 Brassica napus HOM05D007018 ORTHO05D008887 4.4e-46 188.3 139 65.5
BolC8t47779H Brassica oleracea HOM05D007018 ORTHO05D008887 5.7e-46 188.0 139 65.5
Manes.13G069000 Manihot esculenta HOM05D007018 ORTHO05D008887 7.4e-46 187.6 138 71.0
Zm00001eb209390 Zea mays HOM05D007018 ORTHO05D008887 1.7e-45 186.4 134 67.9
THA.LOC104806916 Tarenaya hassleriana HOM05D007018 ORTHO05D008887 1.2e-43 180.3 133 66.9
COL.COLO4_37754 Corchorus olitorius HOM05D007018 ORTHO05D008887 9.4e-41 170.6 108 75.9
Pp3c3_21490 Physcomitrium patens HOM05D007018 ORTHO05D008887 5.9e-35 151.4 157 52.2
Ca_15400_v3 Cicer arietinum L. HOM05D007018 ORTHO05D008887 2.1e-32 142.9 97 71.1
HPP92_001689 Vanilla planifolia HOM05D007018 ORTHO05D008887 2.1e-32 142.9 135 52.6
Nitab4.5_0009646g0030 Nicotiana tabacum HOM05D007018 ORTHO05D008887 1.4e-31 140.2 163 47.2
AUR62035144 Chenopodium quinoa HOM05D007018 ORTHO05D008887 1.2e-30 137.1 164 50.0
EL10Ac1g01910 Beta vulgaris HOM05D007018 ORTHO05D008887 1.7e-29 133.3 133 57.1
AUR62042577 Chenopodium quinoa HOM05D007018 ORTHO05D008887 3.7e-29 132.1 144 53.5
Prupe.5G008600 Prunus persica HOM05D007018 ORTHO05D008887 3.5e-27 125.6 83 71.1
Glyma.04G016200 Glycine max HOM05D007018 ORTHO05D008887 1.3e-26 123.6 103 65.0
Cre16.g661700 Chlamydomonas reinhardtii HOM05D007018 ORTHO05D008887 1.8e-23 113.2 139 47.5
Potri.002G007601 Populus trichocarpa HOM05D007018 ORTHO05D008887 1.7e-21 106.7 74 70.3
Hma1.2p1_0699F.1_g205580 Hydrangea macrophylla HOM05D007018 ORTHO05D008887 1.4e-20 103.6 77 64.9
PRCOL_00006317 Prasinoderma coloniale HOM05D007018 ORTHO05D008887 5.5e-17 91.7 136 37.5
MCO14G410 Micromonas commoda HOM05D007018 ORTHO05D008887 1.6e-16 90.1 135 35.6
AUR62042580 Chenopodium quinoa HOM05D007018 ORTHO05D008887 8.9e-15 84.3 152 40.8
AagrBONN_evm.TU.Sc2ySwM_228.4250 Anthoceros agrestis HOM05D007018 ORTHO05D008887 2.6e-14 82.8 66 60.6
Hund05090 Selenicereus undatus HOM05D007018 ORTHO05D008887 6.3e-13 78.2 97 46.4
SHI07963 Sapria himalayana HOM05D007018 ORTHO05D008887 1.1e-09 67.4 41 75.6
SEGI_04341 Sequoiadendron giganteum HOM05D007018 ORTHO05D008887 1.0e-07 60.8 36 75.0
CBR_g32467 Chara braunii HOM05D007018 ORTHO05D008887 5.2e-07 58.5 74 39.2
HPP92_012557 Vanilla planifolia HOM05D007018 ORTHO05D008887 1.5e-06 57.0 71 42.3
SHI07962 Sapria himalayana HOM05D007018 ORTHO05D008887 3.4e-06 55.8 36 69.4


User provided reference genes

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