Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0807G110 Amborella trichopoda HOM05D005203 ORTHO05D006383 9.4e-86 320.1 154 100.0
PSO210G4213 Papaver somniferum HOM05D005203 ORTHO05D006383 2.1e-69 265.8 152 78.9
Aqoxy5G00999 Aquilegia oxysepala HOM05D005203 ORTHO05D006383 3.6e-69 265.0 152 79.6
PSO170G2598 Papaver somniferum HOM05D005203 ORTHO05D006383 1.8e-68 262.7 152 77.6
Nn6g31681 Nelumbo nucifera HOM05D005203 ORTHO05D006383 8.8e-68 260.4 152 77.6
Cc09_g10810 Coffea canephora HOM05D005203 ORTHO05D006383 2.0e-67 259.2 152 78.3
Dinv14173 Davidia involucrata HOM05D005203 ORTHO05D006383 1.3e-66 256.5 152 75.7
Solyc01g112240.4 Solanum lycopersicum HOM05D005203 ORTHO05D006383 4.9e-66 254.6 152 73.7
CiPaw.06G115500 Carya illinoinensis HOM05D005203 ORTHO05D006383 1.8e-65 252.7 152 74.3
MELO3C013249.2 Cucumis melo HOM05D005203 ORTHO05D006383 3.1e-65 251.9 152 75.7
CsaV3_7G001910 Cucumis sativus L. HOM05D005203 ORTHO05D006383 3.1e-65 251.9 152 75.7
Dinv41871 Davidia involucrata HOM05D005203 ORTHO05D006383 3.1e-65 251.9 152 74.3
Peaxi162Scf00362g00132 Petunia axillaris HOM05D005203 ORTHO05D006383 4.1e-65 251.5 158 72.2
Cfa005369 Carpinus fangiana HOM05D005203 ORTHO05D006383 5.4e-65 251.1 150 76.0
Manes.11G110000 Manihot esculenta HOM05D005203 ORTHO05D006383 5.4e-65 251.1 152 73.7
CANSAT25G3783 Cannabis sativa HOM05D005203 ORTHO05D006383 7.0e-65 250.8 152 75.0
Haze_02001 Corylus avellana HOM05D005203 ORTHO05D006383 7.0e-65 250.8 151 75.5
Sc18g0005820 Simmondsia chinensis HOM05D005203 ORTHO05D006383 1.2e-64 250.0 152 77.0
CSS0012413 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 1.6e-64 249.6 152 74.3
Prupe.8G179800 Prunus persica HOM05D005203 ORTHO05D006383 1.6e-64 249.6 152 73.7
GSVIVG01002028001 Vitis vinifera HOM05D005203 ORTHO05D006383 1.6e-64 249.6 150 76.7
Potri.004G206900 Populus trichocarpa HOM05D005203 ORTHO05D006383 2.7e-64 248.8 152 74.3
Sed0018804 Sechium edule HOM05D005203 ORTHO05D006383 2.7e-64 248.8 152 75.7
Cpa.g.c28580 Carica papaya HOM05D005203 ORTHO05D006383 3.5e-64 248.4 152 74.3
Potri.009G168000 Populus trichocarpa HOM05D005203 ORTHO05D006383 3.5e-64 248.4 152 73.0
Thecc.02G146000 Theobroma cacao HOM05D005203 ORTHO05D006383 3.5e-64 248.4 152 72.4
TWI75G1664 Tripterygium wilfordii HOM05D005203 ORTHO05D006383 5.9e-64 247.7 152 73.0
Glyma.06G000300 Glycine max HOM05D005203 ORTHO05D006383 2.9e-63 245.4 152 74.3
HanXRQChr15g0476431 Helianthus annuus HOM05D005203 ORTHO05D006383 8.6e-63 243.8 150 73.3
MBI05_g33297_MAGBIO Magnolia biondii HOM05D005203 ORTHO05D006383 8.6e-63 243.8 150 77.3
ClCG02G003410 Citrullus lanatus HOM05D005203 ORTHO05D006383 2.5e-62 242.3 141 78.0
Eucgr.L00584 Eucalyptus grandis HOM05D005203 ORTHO05D006383 2.5e-62 242.3 152 70.4
MSTRG.19946 Avicennia marina HOM05D005203 ORTHO05D006383 3.3e-62 241.9 152 70.4
MD10G1141600 Malus domestica HOM05D005203 ORTHO05D006383 4.2e-62 241.5 145 75.2
RcHm_v2.0_Chr6g0280891 Rosa chinensis HOM05D005203 ORTHO05D006383 5.5e-62 241.1 145 75.9
AL7G10160 Arabidopsis lyrata HOM05D005203 ORTHO05D006383 7.2e-62 240.7 152 72.4
Ciclev10028418m.g Citrus clementina HOM05D005203 ORTHO05D006383 7.2e-62 240.7 152 73.0
Lalb_Chr08g0246871 Lupinus albus HOM05D005203 ORTHO05D006383 9.5e-62 240.4 150 75.3
Atru.chr5.3533 Acer truncatum HOM05D005203 ORTHO05D006383 1.6e-61 239.6 150 71.3
Eucgr.H04989 Eucalyptus grandis HOM05D005203 ORTHO05D006383 1.6e-61 239.6 152 70.4
Glyma.04G000400 Glycine max HOM05D005203 ORTHO05D006383 1.6e-61 239.6 152 73.7
FvH4_2g16770 Fragaria vesca HOM05D005203 ORTHO05D006383 2.1e-61 239.2 152 73.0
TPR.G38553 Trifolium pratense HOM05D005203 ORTHO05D006383 3.6e-61 238.4 152 73.7
AT4G38240 Arabidopsis thaliana HOM05D005203 ORTHO05D006383 4.7e-61 238.0 152 71.1
Os02g0832800 Oryza sativa ssp. japonica HOM05D005203 ORTHO05D006383 6.1e-61 237.7 153 71.2
Phvul.009G115600 Phaseolus vulgaris HOM05D005203 ORTHO05D006383 6.1e-61 237.7 152 72.4
Migut.B00006 Erythranthe guttata HOM05D005203 ORTHO05D006383 1.0e-60 236.9 152 69.1
FAN15G3115 Fragaria x ananassa HOM05D005203 ORTHO05D006383 1.4e-60 236.5 152 71.7
Lj1g0021981 Lotus japonicus HOM05D005203 ORTHO05D006383 1.4e-60 236.5 151 73.5
BolC7t46794H Brassica oleracea HOM05D005203 ORTHO05D006383 3.0e-60 235.3 152 68.4
Lsat_1_v5_gn_3_48560 Lactuca sativa HOM05D005203 ORTHO05D006383 4.0e-60 235.0 145 73.8
MD05G1138700 Malus domestica HOM05D005203 ORTHO05D006383 4.0e-60 235.0 143 73.4
PGR042G0992 Punica granatum HOM05D005203 ORTHO05D006383 4.0e-60 235.0 152 70.4
SMO201G0157 Selaginella moellendorffii HOM05D005203 ORTHO05D006383 4.0e-60 235.0 152 71.1
Carub.0007s0018 Capsella rubella HOM05D005203 ORTHO05D006383 5.2e-60 234.6 152 69.1
THA.LOC104824732 Tarenaya hassleriana HOM05D005203 ORTHO05D006383 5.2e-60 234.6 153 69.9
Sp7g37480 Schrenkiella parvula HOM05D005203 ORTHO05D006383 6.8e-60 234.2 152 69.1
CARHR294030 Cardamine hirsuta HOM05D005203 ORTHO05D006383 8.9e-60 233.8 152 69.1
Ca_15273_v3 Cicer arietinum L. HOM05D005203 ORTHO05D006383 8.9e-60 233.8 152 71.1
Gohir.A12G013200 Gossypium hirsutum HOM05D005203 ORTHO05D006383 8.9e-60 233.8 152 68.4
Psat5g000480 Pisum sativum HOM05D005203 ORTHO05D006383 8.9e-60 233.8 152 70.4
ECA234G1180 Erigeron canadensis HOM05D005203 ORTHO05D006383 2.0e-59 232.6 152 69.1
Gohir.D12G014000 Gossypium hirsutum HOM05D005203 ORTHO05D006383 2.0e-59 232.6 152 67.1
Gorai.008G014000 Gossypium raimondii HOM05D005203 ORTHO05D006383 3.4e-59 231.9 152 67.1
Thhalv10025208m.g Eutrema salsugineum HOM05D005203 ORTHO05D006383 9.8e-59 230.3 151 68.9
HPP92_004948 Vanilla planifolia HOM05D005203 ORTHO05D006383 9.8e-59 230.3 151 70.2
ECA246G3822 Erigeron canadensis HOM05D005203 ORTHO05D006383 4.9e-58 228.0 152 69.7
Lsat_1_v5_gn_4_71380 Lactuca sativa HOM05D005203 ORTHO05D006383 6.3e-58 227.6 150 68.0
CSS0021914 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 1.4e-57 226.5 152 67.1
arahy.Tifrunner.gnm1.ann1.H6WGQ1 Arachis hypogaea HOM05D005203 ORTHO05D006383 2.4e-57 225.7 152 69.7
CSS0022527 Camellia sinensis var. sinensis HOM05D005203 ORTHO05D006383 3.2e-57 225.3 152 67.1
HanXRQChr10g0298431 Helianthus annuus HOM05D005203 ORTHO05D006383 3.2e-57 225.3 153 67.3
Zm00001eb421090 Zea mays HOM05D005203 ORTHO05D006383 3.2e-57 225.3 153 69.9
arahy.Tifrunner.gnm1.ann1.Z16TJ0 Arachis hypogaea HOM05D005203 ORTHO05D006383 5.4e-57 224.6 152 69.1
FAN27G1508 Fragaria x ananassa HOM05D005203 ORTHO05D006383 2.7e-56 222.2 141 72.3
BNapus_Darmor_BZH_scaffold_146p00070 Brassica napus HOM05D005203 ORTHO05D006383 3.5e-56 221.9 139 69.8
FAN24G3349 Fragaria x ananassa HOM05D005203 ORTHO05D006383 4.6e-56 221.5 147 70.1
HPP92_022155 Vanilla planifolia HOM05D005203 ORTHO05D006383 7.8e-56 220.7 152 67.8
BraA06t27778Z Brassica rapa HOM05D005203 ORTHO05D006383 3.9e-55 218.4 152 65.1
Cfa005368 Carpinus fangiana HOM05D005203 ORTHO05D006383 3.3e-54 215.3 140 70.7
Nitab4.5_0000783g0090 Nicotiana tabacum HOM05D005203 ORTHO05D006383 9.5e-54 213.8 177 59.3
TAR628G1330 Trochodendron aralioides HOM05D005203 ORTHO05D006383 2.8e-53 212.2 126 76.2
Oeu006117.1 Olea europaea HOM05D005203 ORTHO05D006383 3.6e-53 211.8 140 69.3
CiPaw.05G093000 Carya illinoinensis HOM05D005203 ORTHO05D006383 8.0e-53 210.7 168 61.9
Sabra09G0130500 Salix brachista HOM05D005203 ORTHO05D006383 1.0e-52 210.3 125 76.8
QL11p056323 Quercus lobata HOM05D005203 ORTHO05D006383 2.3e-52 209.1 123 78.0
Sabra04G0139200 Salix brachista HOM05D005203 ORTHO05D006383 3.1e-52 208.8 146 67.8
AUR62010173 Chenopodium quinoa HOM05D005203 ORTHO05D006383 2.6e-51 205.7 126 74.6
Actinidia20576 Actinidia chinensis HOM05D005203 ORTHO05D006383 1.3e-50 203.4 126 73.8
AUR62013174 Chenopodium quinoa HOM05D005203 ORTHO05D006383 1.3e-50 203.4 126 73.8
SGA_v2.0_scaffold399G50809 Striga asiatica HOM05D005203 ORTHO05D006383 1.9e-49 199.5 126 71.4
Eucgr.H04987 Eucalyptus grandis HOM05D005203 ORTHO05D006383 2.4e-49 199.1 126 70.6
vmacro02339 Vaccinium macrocarpon HOM05D005203 ORTHO05D006383 2.4e-49 199.1 152 60.5
Ah.01g009970 Amaranthus hybridus HOM05D005203 ORTHO05D006383 3.2e-49 198.7 140 67.1
AagrBONN_evm.TU.Sc2ySwM_362.2915 Anthoceros agrestis HOM05D005203 ORTHO05D006383 4.6e-48 194.9 142 64.1
Medtr3g118525 Medicago truncatula HOM05D005203 ORTHO05D006383 7.8e-48 194.1 126 72.2
VMungo1309G1049 Vigna mungo HOM05D005203 ORTHO05D006383 7.8e-48 194.1 126 70.6
Lj5A171G135 Lonicera japonica HOM05D005203 ORTHO05D006383 1.9e-46 189.5 127 71.7
Pp3c22_17330 Physcomitrium patens HOM05D005203 ORTHO05D006383 1.9e-46 189.5 154 61.7
CDE07G2075 Ceratophyllum demersum HOM05D005203 ORTHO05D006383 4.3e-46 188.3 123 68.3
Mapoly0041s0049 Marchantia polymorpha HOM05D005203 ORTHO05D006383 4.3e-46 188.3 146 58.2
BcaNung01996 Brassica carinata HOM05D005203 ORTHO05D006383 9.5e-46 187.2 126 67.5
DCAR_026076 Daucus carota HOM05D005203 ORTHO05D006383 4.4e-43 178.3 117 69.2
Pp3c12_4490 Physcomitrium patens HOM05D005203 ORTHO05D006383 2.9e-42 175.6 141 56.7
EL10Ac9g21529 Beta vulgaris HOM05D005203 ORTHO05D006383 3.5e-40 168.7 140 58.6
Aa31LG1G14200 Aethionema arabicum HOM05D005203 ORTHO05D006383 6.0e-40 167.9 118 62.7
SalBow1G5214 Salvia bowleyana HOM05D005203 ORTHO05D006383 5.1e-39 164.9 107 70.1
Aa31LG6G16700 Aethionema arabicum HOM05D005203 ORTHO05D006383 8.6e-39 164.1 109 67.0
CBR_g40811 Chara braunii HOM05D005203 ORTHO05D006383 1.1e-38 163.7 151 49.0
TAR376G0977 Trochodendron aralioides HOM05D005203 ORTHO05D006383 9.5e-38 160.6 92 77.2
Sc18g0005790 Simmondsia chinensis HOM05D005203 ORTHO05D006383 3.1e-36 155.6 98 73.5
PGSC0003DMG403014680 Solanum tuberosum HOM05D005203 ORTHO05D006383 5.4e-33 144.8 79 78.5
COL.COLO4_19776 Corchorus olitorius HOM05D005203 ORTHO05D006383 4.3e-30 135.2 83 69.9
Sed0000358 Sechium edule HOM05D005203 ORTHO05D006383 1.8e-28 129.8 107 60.7
Nitab4.5_0010601g0030 Nicotiana tabacum HOM05D005203 ORTHO05D006383 6.8e-28 127.9 150 46.7
MCO10G329 Micromonas commoda HOM05D005203 ORTHO05D006383 7.6e-27 124.4 151 42.4
Hund06364 Selenicereus undatus HOM05D005203 ORTHO05D006383 2.9e-18 95.9 105 49.5
Rhsim11G0198000 Rhododendron simsii HOM05D005203 ORTHO05D006383 7.3e-14 81.3 46 78.3


User provided reference genes

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