Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0807G103 Amborella trichopoda HOM05D005252 ORTHO05D006788 1.9e-141 505.8 248 100.0
MBI06_g19632_MAGBIO Magnolia biondii HOM05D005252 ORTHO05D006788 2.8e-47 193.0 225 48.9
Nn5g27060 Nelumbo nucifera HOM05D005252 ORTHO05D006788 4.0e-46 189.1 229 46.3
LjContig00141g0010829 Lotus japonicus HOM05D005252 ORTHO05D006788 7.6e-45 184.9 220 46.4
QL02p064187 Quercus lobata HOM05D005252 ORTHO05D006788 1.3e-44 184.1 227 44.1
TAR622G0726 Trochodendron aralioides HOM05D005252 ORTHO05D006788 2.2e-44 183.3 228 44.3
Aqoxy3G04163 Aquilegia oxysepala HOM05D005252 ORTHO05D006788 1.9e-43 180.3 229 47.6
Duzib133G0566 Durio zibethinus HOM05D005252 ORTHO05D006788 4.2e-43 179.1 225 45.3
Ah.06g191550 Amaranthus hybridus HOM05D005252 ORTHO05D006788 9.3e-43 177.9 227 44.9
Haze_14323 Corylus avellana HOM05D005252 ORTHO05D006788 9.3e-43 177.9 220 44.1
Atru.chr1.2124 Acer truncatum HOM05D005252 ORTHO05D006788 2.1e-42 176.8 227 43.6
Glyma.14G209800 Glycine max HOM05D005252 ORTHO05D006788 2.1e-42 176.8 222 44.1
Lsat_1_v5_gn_2_71861 Lactuca sativa HOM05D005252 ORTHO05D006788 7.9e-42 174.9 221 43.0
DCAR_003403 Daucus carota HOM05D005252 ORTHO05D006788 1.0e-41 174.5 224 44.6
arahy.Tifrunner.gnm1.ann1.UX6KKC Arachis hypogaea HOM05D005252 ORTHO05D006788 1.8e-41 173.7 220 41.8
Cfa007750 Carpinus fangiana HOM05D005252 ORTHO05D006788 2.3e-41 173.3 220 43.6
PSO063G5026 Papaver somniferum HOM05D005252 ORTHO05D006788 2.3e-41 173.3 223 45.3
arahy.Tifrunner.gnm1.ann1.Y82BEI Arachis hypogaea HOM05D005252 ORTHO05D006788 3.0e-41 172.9 222 41.9
Gohir.D12G051000 Gossypium hirsutum HOM05D005252 ORTHO05D006788 3.0e-41 172.9 226 42.9
Gorai.008G054300 Gossypium raimondii HOM05D005252 ORTHO05D006788 3.0e-41 172.9 226 42.9
PSO782G3987 Papaver somniferum HOM05D005252 ORTHO05D006788 3.9e-41 172.6 223 44.8
VMungo0647G0073 Vigna mungo HOM05D005252 ORTHO05D006788 3.9e-41 172.6 217 44.2
Thecc.04G057900 Theobroma cacao HOM05D005252 ORTHO05D006788 5.1e-41 172.2 222 43.2
CSS0014125 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 6.7e-41 171.8 228 43.9
Psat2g042800 Pisum sativum HOM05D005252 ORTHO05D006788 6.7e-41 171.8 217 43.3
Zm00001eb320090 Zea mays HOM05D005252 ORTHO05D006788 1.1e-40 171.0 224 44.2
Hma1.2p1_0158F.1_g069575 Hydrangea macrophylla HOM05D005252 ORTHO05D006788 1.9e-40 170.2 224 44.2
Hma1.2p1_0158F.1_g069580 Hydrangea macrophylla HOM05D005252 ORTHO05D006788 1.9e-40 170.2 224 44.2
TPR.G5289 Trifolium pratense HOM05D005252 ORTHO05D006788 2.5e-40 169.9 217 42.4
arahy.Tifrunner.gnm1.ann1.P1K6DT Arachis hypogaea HOM05D005252 ORTHO05D006788 3.3e-40 169.5 220 40.9
Potri.004G081400 Populus trichocarpa HOM05D005252 ORTHO05D006788 4.3e-40 169.1 226 43.8
Gohir.A12G052400 Gossypium hirsutum HOM05D005252 ORTHO05D006788 5.6e-40 168.7 226 42.5
Os07g0471100 Oryza sativa ssp. japonica HOM05D005252 ORTHO05D006788 7.4e-40 168.3 224 46.0
ClCG05G011370 Citrullus lanatus HOM05D005252 ORTHO05D006788 9.6e-40 167.9 222 44.6
Medtr5g076640 Medicago truncatula HOM05D005252 ORTHO05D006788 1.3e-39 167.5 217 41.9
Hund22213 Selenicereus undatus HOM05D005252 ORTHO05D006788 1.3e-39 167.5 221 44.3
Ciclev10011537m.g Citrus clementina HOM05D005252 ORTHO05D006788 1.6e-39 167.2 213 43.7
CiPaw.04G049400 Carya illinoinensis HOM05D005252 ORTHO05D006788 2.8e-39 166.4 221 43.4
FvH4_1g27420 Fragaria vesca HOM05D005252 ORTHO05D006788 2.8e-39 166.4 224 43.8
Ca_05755_v3 Cicer arietinum L. HOM05D005252 ORTHO05D006788 3.7e-39 166.0 218 41.7
Actinidia28776 Actinidia chinensis HOM05D005252 ORTHO05D006788 4.8e-39 165.6 225 44.0
BcaC03g18544 Brassica carinata HOM05D005252 ORTHO05D006788 4.8e-39 165.6 223 43.0
CsaV3_3G021090 Cucumis sativus L. HOM05D005252 ORTHO05D006788 4.8e-39 165.6 222 45.5
CSS0009455 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 6.2e-39 165.2 228 42.1
FAN23G1936 Fragaria x ananassa HOM05D005252 ORTHO05D006788 6.2e-39 165.2 229 42.8
RcHm_v2.0_Chr3g0488621 Rosa chinensis HOM05D005252 ORTHO05D006788 8.1e-39 164.9 223 43.5
Lj2C511T2 Lonicera japonica HOM05D005252 ORTHO05D006788 1.1e-38 164.5 229 42.8
Sed0007469 Sechium edule HOM05D005252 ORTHO05D006788 1.1e-38 164.5 223 46.2
Cpa.g.sc178.38 Carica papaya HOM05D005252 ORTHO05D006788 1.4e-38 164.1 227 41.9
COL.COLO4_20051 Corchorus olitorius HOM05D005252 ORTHO05D006788 1.4e-38 164.1 222 43.7
Phvul.008G241400 Phaseolus vulgaris HOM05D005252 ORTHO05D006788 1.4e-38 164.1 217 42.9
SGA_v2.0_scaffold115G32046 Striga asiatica HOM05D005252 ORTHO05D006788 1.4e-38 164.1 222 41.9
BraA02t05370Z Brassica rapa HOM05D005252 ORTHO05D006788 3.1e-38 162.9 223 43.0
Lalb_Chr04g0251511 Lupinus albus HOM05D005252 ORTHO05D006788 3.1e-38 162.9 222 41.0
vmacro18507 Vaccinium macrocarpon HOM05D005252 ORTHO05D006788 3.1e-38 162.9 226 43.8
C02p08920 Brassica napus HOM05D005252 ORTHO05D006788 4.0e-38 162.5 223 43.0
Thhalv10015946m.g Eutrema salsugineum HOM05D005252 ORTHO05D006788 5.3e-38 162.2 231 41.6
A02p04080 Brassica napus HOM05D005252 ORTHO05D006788 6.9e-38 161.8 223 42.2
BolC2t06801H Brassica oleracea HOM05D005252 ORTHO05D006788 6.9e-38 161.8 223 43.0
HanXRQChr14g0443361 Helianthus annuus HOM05D005252 ORTHO05D006788 6.9e-38 161.8 221 43.4
SEGI_32636 Sequoiadendron giganteum HOM05D005252 ORTHO05D006788 6.9e-38 161.8 240 39.6
FAN28G2815 Fragaria x ananassa HOM05D005252 ORTHO05D006788 9.0e-38 161.4 229 42.4
Glyma.02G240302 Glycine max HOM05D005252 ORTHO05D006788 1.5e-37 160.6 214 42.1
EL10Ac4g08917 Beta vulgaris HOM05D005252 ORTHO05D006788 2.6e-37 159.8 220 42.7
Nitab4.5_0000483g0240 Nicotiana tabacum HOM05D005252 ORTHO05D006788 3.4e-37 159.5 224 41.1
TWI74G0077 Tripterygium wilfordii HOM05D005252 ORTHO05D006788 3.4e-37 159.5 220 41.8
Aa31LG11G12430 Aethionema arabicum HOM05D005252 ORTHO05D006788 4.5e-37 159.1 223 39.9
PGR004G2027 Punica granatum HOM05D005252 ORTHO05D006788 4.5e-37 159.1 224 41.5
AUR62004761 Chenopodium quinoa HOM05D005252 ORTHO05D006788 9.9e-37 157.9 223 42.2
AL6G28290 Arabidopsis lyrata HOM05D005252 ORTHO05D006788 1.3e-36 157.5 225 42.2
AUR62037491 Chenopodium quinoa HOM05D005252 ORTHO05D006788 3.8e-36 156.0 232 40.5
BcaNung00410 Brassica carinata HOM05D005252 ORTHO05D006788 4.9e-36 155.6 223 41.3
CARHR195970 Cardamine hirsuta HOM05D005252 ORTHO05D006788 4.9e-36 155.6 224 40.6
Sp6g26990 Schrenkiella parvula HOM05D005252 ORTHO05D006788 4.9e-36 155.6 229 39.7
CAN.G1681.16 Capsicum annuum HOM05D005252 ORTHO05D006788 6.4e-36 155.2 223 38.1
Nitab4.5_0008137g0010 Nicotiana tabacum HOM05D005252 ORTHO05D006788 8.4e-36 154.8 216 42.6
AT5G17240 Arabidopsis thaliana HOM05D005252 ORTHO05D006788 1.1e-35 154.5 224 42.0
Sc20g0000830 Simmondsia chinensis HOM05D005252 ORTHO05D006788 2.5e-35 153.3 225 40.4
CANSAT56G0277 Cannabis sativa HOM05D005252 ORTHO05D006788 7.1e-35 151.8 230 39.6
Cc07_g12720 Coffea canephora HOM05D005252 ORTHO05D006788 1.6e-34 150.6 212 42.5
MD17G1287300 Malus domestica HOM05D005252 ORTHO05D006788 1.6e-34 150.6 220 40.9
Peaxi162Scf00713g00214 Petunia axillaris HOM05D005252 ORTHO05D006788 1.6e-34 150.6 219 40.6
Sopen02g025950 Solanum pennellii HOM05D005252 ORTHO05D006788 1.6e-34 150.6 220 41.4
PGSC0003DMG400016732 Solanum tuberosum HOM05D005252 ORTHO05D006788 1.6e-34 150.6 220 40.5
Solyc02g081320.4 Solanum lycopersicum HOM05D005252 ORTHO05D006788 2.1e-34 150.2 220 41.8
Dinv19082 Davidia involucrata HOM05D000783 ORTHO05D000705 2.7e-34 149.8 203 44.3
Prupe.3G014000 Prunus persica HOM05D005252 ORTHO05D006788 2.7e-34 149.8 229 38.9
CDE04G0719 Ceratophyllum demersum HOM05D005252 ORTHO05D006788 1.3e-33 147.5 225 40.0
GSVIVG01035253001 Vitis vinifera HOM05D005252 ORTHO05D006788 1.3e-33 147.5 228 39.5
SalBow5G4252 Salvia bowleyana HOM05D005252 ORTHO05D006788 2.3e-33 146.7 222 39.6
SalBow5G4267 Salvia bowleyana HOM05D005252 ORTHO05D006788 2.3e-33 146.7 222 39.6
THA.LOC104820865 Tarenaya hassleriana HOM05D005252 ORTHO05D006788 6.7e-33 145.2 223 39.5
FAN28G2525 Fragaria x ananassa HOM05D005252 ORTHO05D006788 4.3e-32 142.5 207 42.0
ECA238G3559 Erigeron canadensis HOM05D005252 ORTHO05D006788 7.4e-32 141.7 203 41.4
CSS0013830 Camellia sinensis var. sinensis HOM05D005252 ORTHO05D006788 3.7e-31 139.4 205 40.0
SHI24494 Sapria himalayana HOM05D005252 ORTHO05D006788 3.1e-30 136.3 216 39.8
Eucgr.F02912 Eucalyptus grandis HOM05D005252 ORTHO05D006788 4.0e-30 136.0 206 42.7
HPP92_025609 Vanilla planifolia HOM05D005252 ORTHO05D006788 6.9e-30 135.2 206 42.2
arahy.Tifrunner.gnm1.ann1.2Q625H Arachis hypogaea HOM05D005252 ORTHO05D006788 1.5e-29 134.0 191 40.3
Oeu060821.2 Olea europaea HOM05D005252 ORTHO05D006788 3.4e-29 132.9 220 35.5
FAN19G2162 Fragaria x ananassa HOM05D005252 ORTHO05D006788 5.8e-29 132.1 128 52.3
Rhsim08G0021900 Rhododendron simsii HOM05D005252 ORTHO05D006788 1.0e-28 131.3 128 51.6
Migut.K00975 Erythranthe guttata HOM05D005252 ORTHO05D006788 1.3e-28 131.0 224 35.3
Nitab4.5_0011448g0010 Nicotiana tabacum HOM05D005252 ORTHO05D006788 2.2e-28 130.2 202 38.6
Sabra04G0054100 Salix brachista HOM05D005252 ORTHO05D006788 3.2e-27 126.3 209 39.7
Pp3c1_22230 Physcomitrium patens HOM05D005252 ORTHO05D006788 1.3e-25 120.9 235 35.3
Mapoly0060s0114 Marchantia polymorpha HOM05D005252 ORTHO05D006788 3.0e-25 119.8 228 33.3
AagrBONN_evm.TU.Sc2ySwM_344.1683 Anthoceros agrestis HOM05D005252 ORTHO05D006788 4.8e-23 112.5 134 47.0
SMO244G0074 Selaginella moellendorffii HOM05D005252 ORTHO05D006788 4.1e-22 109.4 224 34.4
Manes.01G124000 Manihot esculenta HOM05D005252 ORTHO05D006788 5.3e-22 109.0 200 38.5
unitig_748.g8447 Utricularia gibba HOM05D001485 ORTHO05D001384 2.6e-21 106.7 122 46.7
AagrBONN_evm.TU.Sc2ySwM_344.1689 Anthoceros agrestis HOM05D005252 ORTHO05D006788 3.4e-21 106.3 134 45.5
CBR_g38413 Chara braunii HOM05D005252 ORTHO05D006788 1.1e-19 101.3 171 38.6
Psat6g212680 Pisum sativum HOM05D005252 ORTHO05D006788 1.7e-12 77.4 71 57.7
Cre10.g437829 Chlamydomonas reinhardtii HOM05D005252 ORTHO05D006788 2.3e-09 67.0 144 30.6
Carub.0006s1543 Capsella rubella HOM05D005252 ORTHO05D006788 1.3e-07 61.2 55 54.5


User provided reference genes

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