Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0807G100 Amborella trichopoda HOM05D005712 ORTHO05D007865 2.3e-215 751.9 372 100.0
MBI05_g08201_MAGBIO Magnolia biondii HOM05D005712 ORTHO05D007865 7.5e-89 331.6 292 61.3
Aqoxy6G01560 Aquilegia oxysepala HOM05D005712 ORTHO05D007865 7.3e-84 315.1 374 49.5
Cpa.g.sc26.149 Carica papaya HOM05D005712 ORTHO05D007865 1.6e-83 313.9 298 56.7
Duzib116G0237 Durio zibethinus HOM05D005712 ORTHO05D007865 1.4e-82 310.8 311 54.7
Sed0012463 Sechium edule HOM05D005712 ORTHO05D007865 1.4e-82 310.8 320 54.4
QL02p015343 Quercus lobata HOM05D005712 ORTHO05D007865 3.1e-82 309.7 294 56.1
Actinidia15518 Actinidia chinensis HOM05D005712 ORTHO05D007865 6.8e-82 308.5 320 53.1
CSS0017080 Camellia sinensis var. sinensis HOM05D005712 ORTHO05D007865 6.8e-82 308.5 318 55.3
Ciclev10001686m.g Citrus clementina HOM05D005712 ORTHO05D007865 1.2e-81 307.8 313 54.3
Nn5g31025 Nelumbo nucifera HOM05D005712 ORTHO05D007865 1.2e-81 307.8 256 64.5
Thecc.08G064200 Theobroma cacao HOM05D005712 ORTHO05D007865 1.2e-81 307.8 311 55.0
CsaV3_4G037540 Cucumis sativus L. HOM05D005712 ORTHO05D007865 1.5e-81 307.4 305 55.7
Atru.chr13.78 Acer truncatum HOM05D005712 ORTHO05D007865 3.4e-81 306.2 268 60.1
Nitab4.5_0004637g0020 Nicotiana tabacum HOM05D005712 ORTHO05D007865 3.4e-81 306.2 237 63.3
Sabra05G0197900 Salix brachista HOM05D005712 ORTHO05D007865 3.4e-81 306.2 268 60.1
Actinidia17068 Actinidia chinensis HOM05D005712 ORTHO05D007865 7.6e-81 305.1 311 54.0
Dinv31977 Davidia involucrata HOM05D005712 ORTHO05D007865 7.6e-81 305.1 305 57.0
Nitab4.5_0000486g0150 Nicotiana tabacum HOM05D005712 ORTHO05D007865 9.9e-81 304.7 236 63.6
Potri.005G255300 Populus trichocarpa HOM05D005712 ORTHO05D007865 1.7e-80 303.9 268 59.0
Sopen08g012540 Solanum pennellii HOM05D005712 ORTHO05D007865 2.2e-80 303.5 268 58.6
TAR381G1666 Trochodendron aralioides HOM05D005712 ORTHO05D007865 2.2e-80 303.5 241 65.1
COL.COLO4_07687 Corchorus olitorius HOM05D005712 ORTHO05D007865 8.4e-80 301.6 309 53.7
MELO3C017048.2 Cucumis melo HOM05D005712 ORTHO05D007865 8.4e-80 301.6 251 62.2
ECA238G0561 Erigeron canadensis HOM05D005712 ORTHO05D007865 8.4e-80 301.6 292 54.1
CiPaw.07G134700 Carya illinoinensis HOM05D005712 ORTHO05D007865 1.4e-79 300.8 264 59.8
TAR625G0170 Trochodendron aralioides HOM05D005712 ORTHO05D007865 1.4e-79 300.8 296 55.4
HanXRQChr06g0185301 Helianthus annuus HOM05D005712 ORTHO05D007865 1.9e-79 300.4 303 53.1
Gohir.D05G181100 Gossypium hirsutum HOM05D005712 ORTHO05D007865 2.4e-79 300.1 269 58.7
Gorai.009G186100 Gossypium raimondii HOM05D005712 ORTHO05D007865 2.4e-79 300.1 269 58.7
Cfa014126 Carpinus fangiana HOM05D005712 ORTHO05D007865 3.2e-79 299.7 276 57.2
Gohir.A05G177700 Gossypium hirsutum HOM05D005712 ORTHO05D007865 9.2e-79 298.1 278 57.2
Hund05083 Selenicereus undatus HOM05D005712 ORTHO05D007865 9.2e-79 298.1 305 54.8
CAN.G36.16 Capsicum annuum HOM05D005712 ORTHO05D007865 1.2e-78 297.7 233 62.7
Solyc08g042080.3 Solanum lycopersicum HOM05D005712 ORTHO05D007865 1.2e-78 297.7 268 57.8
Rhsim06G0004000 Rhododendron simsii HOM05D005712 ORTHO05D007865 2.1e-78 297.0 299 54.2
TWI56G0384 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 2.1e-78 297.0 287 54.7
Migut.N02981 Erythranthe guttata HOM05D005712 ORTHO05D007865 2.7e-78 296.6 270 57.8
TWI12G0719 Tripterygium wilfordii HOM05D005712 ORTHO05D007865 2.7e-78 296.6 278 54.3
Potri.002G006300 Populus trichocarpa HOM05D005712 ORTHO05D007865 3.5e-78 296.2 265 59.6
PGSC0003DMG400000968 Solanum tuberosum HOM05D005712 ORTHO05D007865 3.5e-78 296.2 268 57.5
Lsat_1_v5_gn_2_2221 Lactuca sativa HOM05D005712 ORTHO05D007865 4.6e-78 295.8 262 56.9
GSVIVG01013413001 Vitis vinifera HOM05D005712 ORTHO05D007865 4.6e-78 295.8 252 63.5
Manes.05G126100 Manihot esculenta HOM05D005712 ORTHO05D007865 1.7e-77 293.9 264 59.5
Hma1.2p1_0699F.1_g205630 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 2.3e-77 293.5 341 49.9
Aa31LG7G4990 Aethionema arabicum HOM05D005712 ORTHO05D007865 1.5e-76 290.8 300 52.7
MSTRG.22087 Avicennia marina HOM05D005712 ORTHO05D007865 1.5e-76 290.8 264 58.3
Phvul.009G007500 Phaseolus vulgaris HOM05D005712 ORTHO05D007865 1.9e-76 290.4 234 62.0
CDE04G2669 Ceratophyllum demersum HOM05D005712 ORTHO05D007865 2.5e-76 290.0 265 59.2
AT1G20830 Arabidopsis thaliana HOM05D005712 ORTHO05D007865 3.3e-76 289.7 296 54.4
Glyma.06G015100 Glycine max HOM05D005712 ORTHO05D007865 3.3e-76 289.7 227 62.1
PSO675G3648 Papaver somniferum HOM05D005712 ORTHO05D007865 5.6e-76 288.9 281 53.0
SGA_v2.0_scaffold54G19632 Striga asiatica HOM05D005712 ORTHO05D007865 7.3e-76 288.5 225 64.4
vmacro21777 Vaccinium macrocarpon HOM05D005712 ORTHO05D007865 7.3e-76 288.5 247 60.7
Sc02g0009220 Simmondsia chinensis HOM05D005712 ORTHO05D007865 1.6e-75 287.3 231 62.8
CARHR021260 Cardamine hirsuta HOM05D005712 ORTHO05D007865 2.1e-75 287.0 302 51.7
PSO541G4707 Papaver somniferum HOM05D005712 ORTHO05D007865 2.1e-75 287.0 218 64.7
THA.LOC104813742 Tarenaya hassleriana HOM05D005712 ORTHO05D007865 2.8e-75 286.6 296 53.4
Haze_22847 Corylus avellana HOM05D005712 ORTHO05D007865 3.6e-75 286.2 345 48.1
Glyma.04G015100 Glycine max HOM05D005712 ORTHO05D007865 3.6e-75 286.2 186 72.6
CANSAT35G0891 Cannabis sativa HOM05D005712 ORTHO05D007865 6.2e-75 285.4 232 63.8
ClCG11G018940 Citrullus lanatus HOM05D005712 ORTHO05D007865 6.2e-75 285.4 369 44.7
Lalb_Chr23g0265571 Lupinus albus HOM05D005712 ORTHO05D007865 8.1e-75 285.0 241 61.4
Oeu004544.1 Olea europaea HOM05D005712 ORTHO05D007865 8.1e-75 285.0 236 63.6
Carub.0001s2029 Capsella rubella HOM05D005712 ORTHO05D007865 1.4e-74 284.3 299 53.2
Lj1g0001697 Lotus japonicus HOM05D005712 ORTHO05D007865 1.4e-74 284.3 204 67.6
Ca_15390_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 1.8e-74 283.9 275 53.1
Peaxi162Scf00632g00416 Petunia axillaris HOM05D005712 ORTHO05D007865 2.4e-74 283.5 229 62.9
FAN18G0352 Fragaria x ananassa HOM05D005712 ORTHO05D007865 4.0e-74 282.7 281 53.7
MD06G1005200 Malus domestica HOM05D005712 ORTHO05D007865 4.0e-74 282.7 280 56.1
RcHm_v2.0_Chr7g0216471 Rosa chinensis HOM05D005712 ORTHO05D007865 5.2e-74 282.3 298 50.7
VMungo1309G2122 Vigna mungo HOM05D005712 ORTHO05D007865 9.0e-74 281.6 217 64.1
BcaB03g12849 Brassica carinata HOM05D005712 ORTHO05D007865 1.2e-73 281.2 252 57.1
A06p16820 Brassica napus HOM05D005712 ORTHO05D007865 1.2e-73 281.2 222 63.1
BraA06t24791Z Brassica rapa HOM05D005712 ORTHO05D007865 1.2e-73 281.2 222 63.1
Eucgr.F03584 Eucalyptus grandis HOM05D005712 ORTHO05D007865 1.2e-73 281.2 265 55.5
Lj4C5T14 Lonicera japonica HOM05D005712 ORTHO05D007865 1.5e-73 280.8 296 53.0
Ca_29628_v3 Cicer arietinum L. HOM05D005712 ORTHO05D007865 2.0e-73 280.4 212 63.7
FAN13G2028 Fragaria x ananassa HOM05D005712 ORTHO05D007865 2.6e-73 280.0 281 53.4
Cc10_g00320 Coffea canephora HOM05D005712 ORTHO05D007865 4.4e-73 279.3 219 63.5
Thhalv10007995m.g Eutrema salsugineum HOM05D005712 ORTHO05D007865 5.8e-73 278.9 225 62.7
BcaB07g32078 Brassica carinata HOM05D005712 ORTHO05D007865 1.3e-72 277.7 229 61.1
DCAR_022990 Daucus carota HOM05D000190 ORTHO05D007865 1.3e-72 277.7 216 63.0
FAN08G0897 Fragaria x ananassa HOM05D005712 ORTHO05D007865 2.2e-72 276.9 281 53.0
Medtr3g116050 Medicago truncatula HOM05D005712 ORTHO05D007865 2.2e-72 276.9 238 59.7
BcaC05g25986 Brassica carinata HOM05D005712 ORTHO05D007865 2.9e-72 276.6 230 60.4
C05p19380 Brassica napus HOM05D005712 ORTHO05D007865 2.9e-72 276.6 230 60.4
FAN04G3045 Fragaria x ananassa HOM05D005712 ORTHO05D007865 2.9e-72 276.6 296 51.7
Ah.00g001120 Amaranthus hybridus HOM05D005712 ORTHO05D007865 3.8e-72 276.2 267 54.7
AUR62024105 Chenopodium quinoa HOM05D005712 ORTHO05D007865 1.1e-71 274.6 287 51.2
Sp1g18530 Schrenkiella parvula HOM05D005712 ORTHO05D007865 1.1e-71 274.6 225 61.8
AL1G33850 Arabidopsis lyrata HOM05D005712 ORTHO05D007865 1.4e-71 274.2 229 62.0
arahy.Tifrunner.gnm1.ann1.CTTM8W Arachis hypogaea HOM05D005712 ORTHO05D007865 1.9e-71 273.9 264 56.4
BolC5t30641H Brassica oleracea HOM05D005712 ORTHO05D007865 7.1e-71 271.9 231 60.2
FvH4_5g25940 Fragaria vesca HOM05D005712 ORTHO05D007865 7.1e-71 271.9 228 60.1
Prupe.5G006400 Prunus persica HOM05D005712 ORTHO05D007865 7.1e-71 271.9 222 63.1
TPR.G38133 Trifolium pratense HOM05D005712 ORTHO05D007865 2.3e-69 266.9 243 56.4
SalBow6G6969 Salvia bowleyana HOM05D005712 ORTHO05D007865 3.0e-69 266.5 301 49.8
EL10Ac1g01884 Beta vulgaris HOM05D005712 ORTHO05D007865 1.5e-68 264.2 273 52.0
AUR62035160 Chenopodium quinoa HOM05D005712 ORTHO05D007865 2.5e-68 263.5 210 61.9
RcHm_v2.0_Chr4g0410601 Rosa chinensis HOM05D005712 ORTHO05D007865 5.6e-68 262.3 241 56.8
unitig_22.g5745 Utricularia gibba HOM05D005712 ORTHO05D007865 2.1e-67 260.4 239 60.3
arahy.Tifrunner.gnm1.ann1.16JRKN Arachis hypogaea HOM05D005712 ORTHO05D007865 6.2e-67 258.8 216 63.0
Hma1.2p1_0699F.1_g205640 Hydrangea macrophylla HOM05D005712 ORTHO05D007865 1.4e-66 257.7 180 70.6
SEGI_27803 Sequoiadendron giganteum HOM05D005712 ORTHO05D007865 2.9e-64 250.0 229 55.0
Psat5g008680 Pisum sativum HOM05D005712 ORTHO05D007865 2.7e-62 243.4 171 68.4
HPP92_022548 Vanilla planifolia HOM05D005712 ORTHO05D007865 5.6e-60 235.7 187 62.6
Os04g0584900 Oryza sativa ssp. japonica HOM05D005712 ORTHO05D007865 4.0e-58 229.6 254 48.0
Zm00001eb428100 Zea mays HOM05D005712 ORTHO05D007865 9.0e-58 228.4 237 49.4
Zm00001eb072780 Zea mays HOM05D005712 ORTHO05D007865 7.6e-57 225.3 259 47.5
Cpa.g.sc26.148 Carica papaya HOM05D005712 ORTHO05D007865 6.4e-56 222.2 153 73.2
Pp3c9_6030 Physcomitrium patens HOM05D005712 ORTHO05D007865 1.3e-51 208.0 268 43.3
AagrBONN_evm.TU.Sc2ySwM_117.1031 Anthoceros agrestis HOM05D005712 ORTHO05D007865 2.8e-51 206.8 176 58.0
Mapoly0022s0159 Marchantia polymorpha HOM05D005712 ORTHO05D007865 2.4e-50 203.8 172 57.6
SMO276G0054 Selaginella moellendorffii HOM05D005712 ORTHO05D007865 3.8e-48 196.4 175 56.0
Pp3c15_5620 Physcomitrium patens HOM05D005712 ORTHO05D007865 3.2e-47 193.4 179 53.6
Oeu019899.1 Olea europaea HOM05D005712 ORTHO05D007865 2.1e-46 190.7 121 74.4
Duzib093G1432 Durio zibethinus HOM05D005712 ORTHO05D007865 3.4e-41 173.3 103 79.6
Cpa.g.c30366.3 Carica papaya HOM05D005712 ORTHO05D007865 9.7e-28 128.6 79 75.9
Cpa.g.c44851 Carica papaya HOM05D005712 ORTHO05D007865 4.1e-26 123.2 69 82.6
Oeu019902.1 Olea europaea HOM05D005712 ORTHO05D007865 9.1e-18 95.5 191 38.7
A07p15460 Brassica napus HOM05D005712 ORTHO05D007865 1.7e-11 74.7 57 61.4
BcaB03g14422 Brassica carinata HOM05D005712 ORTHO05D014368 1.1e-07 62.0 55 60.0
BolC8t49668H Brassica oleracea HOM05D005712 ORTHO05D032168 9.4e-07 58.9 140 30.0


User provided reference genes

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