Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0807G097 Amborella trichopoda HOM05D007897 ORTHO05D010061 4.2e-207 724.9 507 100.0
MBI07_g06195_MAGBIO Magnolia biondii HOM05D007897 ORTHO05D010061 1.7e-91 340.9 453 70.2
TAR633G2792 Trochodendron aralioides HOM05D007897 ORTHO05D010061 8.7e-88 328.6 439 68.6
CSS0029276 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 1.0e-83 315.1 504 61.7
Dinv32167 Davidia involucrata HOM05D007897 ORTHO05D010061 1.1e-82 311.6 483 63.1
Nn8g41262 Nelumbo nucifera HOM05D007897 ORTHO05D010061 1.2e-81 308.1 453 64.9
TWI23G0094 Tripterygium wilfordii HOM05D007897 ORTHO05D010061 3.0e-80 303.5 507 58.4
Manes.05G198900 Manihot esculenta HOM05D007897 ORTHO05D010061 1.3e-78 298.1 478 60.9
TAR633G2399 Trochodendron aralioides HOM05D007897 ORTHO05D010061 1.1e-77 295.0 427 65.8
PSO017G4232 Papaver somniferum HOM05D007897 ORTHO05D010061 1.3e-75 288.1 490 50.4
QL06p027281 Quercus lobata HOM05D007897 ORTHO05D010061 1.3e-75 288.1 442 66.7
Sabra14G0112700 Salix brachista HOM05D007897 ORTHO05D010061 8.4e-75 285.4 437 65.0
PSO063G5193 Papaver somniferum HOM05D007897 ORTHO05D010061 1.1e-74 285.0 485 50.1
Thecc.04G191100 Theobroma cacao HOM05D007897 ORTHO05D010061 1.9e-74 284.3 463 61.1
Ciclev10004784m.g Citrus clementina HOM05D007897 ORTHO05D010061 4.2e-74 283.1 466 61.2
COL.COLO4_35959 Corchorus olitorius HOM05D007897 ORTHO05D010061 4.6e-73 279.6 449 56.6
Cfa008662 Carpinus fangiana HOM05D007897 ORTHO05D010061 3.9e-72 276.6 487 60.8
Haze_11681 Corylus avellana HOM05D007897 ORTHO05D010061 3.3e-71 273.5 480 61.0
Gorai.006G225200 Gossypium raimondii HOM05D007897 ORTHO05D010061 9.7e-71 271.9 429 58.0
Gohir.D09G201400 Gossypium hirsutum HOM05D007897 ORTHO05D010061 2.8e-70 270.4 429 57.8
VMungo1383G3288 Vigna mungo HOM05D007897 ORTHO05D010061 2.8e-70 270.4 475 60.4
Sed0009503 Sechium edule HOM05D007897 ORTHO05D010061 8.2e-70 268.9 443 62.5
Lalb_Chr03g0036571 Lupinus albus HOM05D007897 ORTHO05D010061 6.9e-69 265.8 446 54.5
Phvul.001G265200 Phaseolus vulgaris HOM05D007897 ORTHO05D010061 6.9e-69 265.8 439 63.6
MD04G1021700 Malus domestica HOM05D007897 ORTHO05D010061 2.0e-68 264.2 507 58.0
arahy.Tifrunner.gnm1.ann1.TEUF1S Arachis hypogaea HOM05D007897 ORTHO05D010061 5.9e-68 262.7 439 64.7
arahy.Tifrunner.gnm1.ann1.T7EAWL Arachis hypogaea HOM05D007897 ORTHO05D010061 8.5e-67 258.8 439 64.5
Cpa.g.sc157.16 Carica papaya HOM05D007897 ORTHO05D010061 8.5e-67 258.8 496 55.8
Cc03_g09150 Coffea canephora HOM05D007897 ORTHO05D010061 8.5e-67 258.8 415 66.0
CSS0018651 Camellia sinensis var. sinensis HOM05D007897 ORTHO05D010061 2.7e-65 253.8 380 70.5
Duzib212G0894 Durio zibethinus HOM05D007897 ORTHO05D010061 6.1e-65 252.7 469 51.0
Eucgr.L00640 Eucalyptus grandis HOM05D007897 ORTHO05D010061 2.3e-64 250.8 438 51.6
THA.LOC104808674 Tarenaya hassleriana HOM05D007897 ORTHO05D010061 1.1e-63 248.4 438 59.8
CANSAT78G0179 Cannabis sativa HOM05D007897 ORTHO05D010061 1.7e-62 244.6 464 59.9
AL7G42190 Arabidopsis lyrata HOM05D007897 ORTHO05D010061 6.3e-62 242.7 450 57.3
RcHm_v2.0_Chr4g0412521 Rosa chinensis HOM05D007897 ORTHO05D010061 6.3e-62 242.7 460 59.1
Glyma.18G003400 Glycine max HOM05D007897 ORTHO05D010061 3.1e-61 240.4 439 61.3
FvH4_4g12861 Fragaria vesca HOM05D007897 ORTHO05D010061 5.3e-61 239.6 454 58.1
CARHR220230 Cardamine hirsuta HOM05D007897 ORTHO05D010061 9.1e-61 238.8 415 60.0
Thhalv10027442m.g Eutrema salsugineum HOM05D007897 ORTHO05D010061 3.4e-60 236.9 413 62.0
FAN07G0261 Fragaria x ananassa HOM05D005839 ORTHO05D005686 2.9e-59 233.8 454 57.7
PGR142G1366 Punica granatum HOM05D007897 ORTHO05D010061 8.5e-59 232.3 409 50.4
Glyma.11G253700 Glycine max HOM05D007897 ORTHO05D010061 1.2e-57 228.4 439 60.6
Potri.014G149500 Populus trichocarpa HOM05D007897 ORTHO05D010061 1.4e-56 224.9 370 67.8
Gohir.A09G207900 Gossypium hirsutum HOM05D007897 ORTHO05D010061 3.0e-56 223.8 192 59.9
AT4G14190 Arabidopsis thaliana HOM05D007897 ORTHO05D010061 1.1e-55 221.9 451 56.1
CiPaw.02G062400 Carya illinoinensis HOM05D007897 ORTHO05D010061 3.3e-55 220.3 373 68.1
BcaB08g35766 Brassica carinata HOM05D007897 ORTHO05D010061 5.7e-55 219.5 494 51.0
Carub.0007s2820 Capsella rubella HOM05D007897 ORTHO05D010061 3.7e-54 216.9 413 56.4
Oeu050722.1 Olea europaea HOM05D005839 ORTHO05D009229 2.0e-52 211.1 374 67.1
Aa31LG9G3200 Aethionema arabicum HOM05D007897 ORTHO05D010061 3.5e-52 210.3 488 54.9
ECA248G1461 Erigeron canadensis HOM05D007897 ORTHO05D010061 1.3e-51 208.4 460 51.3
Atru.chr3.1764 Acer truncatum HOM05D007897 ORTHO05D010061 6.5e-51 206.1 180 56.7
Sp6g16180 Schrenkiella parvula HOM05D007897 ORTHO05D010061 6.5e-51 206.1 434 57.6
HanXRQChr01g0022031 Helianthus annuus HOM05D007897 ORTHO05D010061 3.6e-49 200.3 422 54.0
C09p44340 Brassica napus HOM05D007897 ORTHO05D010061 2.3e-48 197.6 414 55.6
A10p11440 Brassica napus HOM05D007897 ORTHO05D010061 5.2e-48 196.4 494 50.6
HanXRQChr17g0535531 Helianthus annuus HOM05D007897 ORTHO05D010061 2.6e-47 194.1 423 53.4
BolC9t57304H Brassica oleracea HOM05D007897 ORTHO05D010061 5.7e-47 193.0 414 55.8
BraA10t43238Z Brassica rapa HOM05D007897 ORTHO05D010061 5.7e-47 193.0 494 50.2
HPP92_007232 Vanilla planifolia HOM05D007897 ORTHO05D010061 9.7e-47 192.2 471 52.9
FAN22G1341 Fragaria x ananassa HOM05D007897 ORTHO05D010061 1.8e-45 188.0 178 52.8
Lsat_1_v5_gn_1_70121 Lactuca sativa HOM05D007897 ORTHO05D010061 1.8e-45 188.0 423 51.5
Oeu050723.3 Olea europaea HOM05D007897 ORTHO05D009229 7.0e-45 186.0 164 59.1
FAN17G1799 Fragaria x ananassa HOM05D005839 ORTHO05D005686 3.5e-44 183.7 381 59.6
BcaC04g20377 Brassica carinata HOM05D007897 ORTHO05D010061 1.2e-36 158.7 414 44.7
Manes.05G199032 Manihot esculenta HOM05D007897 ORTHO05D010061 6.5e-35 152.9 336 64.3
arahy.Tifrunner.gnm1.ann1.EZRM4Y Arachis hypogaea HOM05D007897 ORTHO05D010061 4.1e-29 133.7 380 60.3
Prupe.1G171300 Prunus persica HOM05D007897 ORTHO05D010061 6.1e-25 119.8 117 45.3
Mapoly0002s0203 Marchantia polymorpha HOM05D007036 ORTHO05D008885 4.0e-16 90.5 422 43.8
SEGI_31150 Sequoiadendron giganteum HOM05D007036 ORTHO05D008885 4.0e-16 90.5 174 35.1
TAR636G0074 Trochodendron aralioides HOM05D007036 ORTHO05D008885 5.2e-16 90.1 203 33.0
Pp3c4_3090 Physcomitrium patens HOM05D007036 ORTHO05D008885 8.9e-16 89.4 418 35.9
PGR083G2517 Punica granatum HOM05D007036 ORTHO05D008885 1.2e-15 89.0 202 32.2
MELO3C003928.2 Cucumis melo HOM05D007036 ORTHO05D008885 1.5e-15 88.6 192 33.3
ATR0626G201 Amborella trichopoda HOM05D007036 ORTHO05D008885 2.0e-15 88.2 203 32.0
ClCG11G011370 Citrullus lanatus HOM05D007036 ORTHO05D008885 2.0e-15 88.2 198 32.3
CsaV3_2G009100 Cucumis sativus L. HOM05D007036 ORTHO05D008885 2.6e-15 87.8 199 33.2
Oeu011819.1 Olea europaea HOM05D007036 ORTHO05D008885 7.5e-15 86.3 200 33.5
Sabra18G0121200 Salix brachista HOM05D007036 ORTHO05D008885 9.8e-15 85.9 193 33.7
Sabra18G0128300 Salix brachista HOM05D007036 ORTHO05D008885 9.8e-15 85.9 193 33.7
BcaB01g00982 Brassica carinata HOM05D007036 ORTHO05D008885 1.7e-14 85.1 202 32.2
Ah.07g208320 Amaranthus hybridus HOM05D007036 ORTHO05D008885 2.9e-14 84.3 197 32.5
MBI13_g34303_MAGBIO Magnolia biondii HOM05D007036 ORTHO05D008885 2.9e-14 84.3 200 32.5
Sp5g14950 Schrenkiella parvula HOM05D007036 ORTHO05D008885 2.9e-14 84.3 201 33.8
HanXRQChr09g0261951 Helianthus annuus HOM05D007036 ORTHO05D008885 4.9e-14 83.6 203 31.5
BcaC01g01887 Brassica carinata HOM05D007036 ORTHO05D008885 8.3e-14 82.8 202 31.2
C03p70950 Brassica napus HOM05D007036 ORTHO05D008885 8.3e-14 82.8 202 31.2
BolC3t19373H Brassica oleracea HOM05D007036 ORTHO05D008885 8.3e-14 82.8 202 31.2
BraA06t25155Z Brassica rapa HOM05D007036 ORTHO05D008885 8.3e-14 82.8 202 31.2
CSS0020574 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 1.1e-13 82.4 197 33.0
Lsat_1_v5_gn_6_31220 Lactuca sativa HOM05D007036 ORTHO05D008885 1.1e-13 82.4 203 31.5
Thecc.09G196200 Theobroma cacao HOM05D007036 ORTHO05D008885 1.1e-13 82.4 202 32.7
Carub.0001s3409 Capsella rubella HOM05D007036 ORTHO05D008885 1.4e-13 82.0 196 31.6
AUR62029463 Chenopodium quinoa HOM05D007036 ORTHO05D008885 1.4e-13 82.0 204 32.4
A06p20770 Brassica napus HOM05D007036 ORTHO05D008885 1.9e-13 81.6 202 30.7
CSS0014683 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 1.9e-13 81.6 197 32.5
Sc16g0002180 Simmondsia chinensis HOM05D007036 ORTHO05D008885 1.9e-13 81.6 203 34.5
Cpa.g.sc115.26 Carica papaya HOM05D007036 ORTHO05D008885 3.2e-13 80.9 201 31.8
Gohir.A06G110000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 3.2e-13 80.9 201 31.3
Gohir.D06G112000 Gossypium hirsutum HOM05D007036 ORTHO05D008885 3.2e-13 80.9 201 31.3
Peaxi162Scf00954g00025 Petunia axillaris HOM05D007036 ORTHO05D008885 3.2e-13 80.9 192 33.9
Duzib168G0358 Durio zibethinus HOM05D007036 ORTHO05D008885 4.1e-13 80.5 199 31.2
Gorai.010G127600 Gossypium raimondii HOM05D007036 ORTHO05D008885 4.1e-13 80.5 201 31.3
Aa31LG4G9890 Aethionema arabicum HOM05D007036 ORTHO05D008885 5.4e-13 80.1 202 30.7
AT3G42630 Arabidopsis thaliana HOM05D007036 ORTHO05D008885 5.4e-13 80.1 202 31.2
Glyma.01G132800 Glycine max HOM05D007036 ORTHO05D008885 5.4e-13 80.1 202 29.2
Lj2g0012301 Lotus japonicus HOM05D007036 ORTHO05D008885 5.4e-13 80.1 202 30.7
GSVIVG01032259001 Vitis vinifera HOM05D007036 ORTHO05D008885 5.4e-13 80.1 203 32.0
Potri.018G146900 Populus trichocarpa HOM05D007036 ORTHO05D008885 7.0e-13 79.7 193 31.6
unitig_26.g9126 Utricularia gibba HOM05D007036 ORTHO05D008885 7.0e-13 79.7 193 32.1
HPP92_028312 Vanilla planifolia HOM05D007036 ORTHO05D008885 7.0e-13 79.7 203 32.5
arahy.Tifrunner.gnm1.ann1.UBG147 Arachis hypogaea HOM05D007036 ORTHO05D008885 9.2e-13 79.3 186 32.3
Cc00_g00150 Coffea canephora HOM05D007036 ORTHO05D008885 9.2e-13 79.3 203 31.5
FvH4_4g06090 Fragaria vesca HOM05D007036 ORTHO05D008885 9.2e-13 79.3 196 30.6
FAN12G1049 Fragaria x ananassa HOM05D007036 ORTHO05D008885 9.2e-13 79.3 196 30.6
arahy.Tifrunner.gnm1.ann1.1YAE55 Arachis hypogaea HOM05D007036 ORTHO05D008885 1.2e-12 79.0 186 31.7
Lj5P749T15 Lonicera japonica HOM05D007036 ORTHO05D008885 1.2e-12 79.0 203 30.0
Manes.01G260400 Manihot esculenta HOM05D007036 ORTHO05D008885 1.2e-12 79.0 192 31.8
PSO170G3146 Papaver somniferum HOM05D007036 ORTHO05D008885 1.2e-12 79.0 199 31.7
QL11p008742 Quercus lobata HOM05D007036 ORTHO05D008885 1.2e-12 79.0 198 29.8
AL5G20840 Arabidopsis lyrata HOM05D007036 ORTHO05D008885 1.6e-12 78.6 202 30.2
MD11G1028400 Malus domestica HOM05D007036 ORTHO05D008885 1.6e-12 78.6 202 30.7
MSTRG.5959 Avicennia marina HOM05D007036 ORTHO05D008885 2.0e-12 78.2 203 30.5
Ciclev10010414m.g Citrus clementina HOM05D007036 ORTHO05D008885 2.0e-12 78.2 198 32.8
Thhalv10027431m.g Eutrema salsugineum HOM05D007897 ORTHO05D010061 2.0e-12 78.2 90 40.0
Nn5g27062 Nelumbo nucifera HOM05D007036 ORTHO05D008885 2.0e-12 78.2 203 32.0
Phvul.010G069800 Phaseolus vulgaris HOM05D007036 ORTHO05D008885 2.0e-12 78.2 202 28.7
FAN17G1483 Fragaria x ananassa HOM05D007036 ORTHO05D008885 2.7e-12 77.8 196 30.6
CAN.G106.6 Capsicum annuum HOM05D007036 ORTHO05D008885 3.5e-12 77.4 193 32.6
HanXRQChr09g0243521 Helianthus annuus HOM05D007897 ORTHO05D010061 3.5e-12 77.4 113 40.7
Rhsim01G0110100 Rhododendron simsii HOM05D007036 ORTHO05D008885 3.5e-12 77.4 200 33.0
RcHm_v2.0_Chr4g0397671 Rosa chinensis HOM05D007036 ORTHO05D008885 3.5e-12 77.4 196 30.6
CANSAT80G2763 Cannabis sativa HOM05D007036 ORTHO05D008885 4.6e-12 77.0 194 32.0
ECA236G1169 Erigeron canadensis HOM05D007036 ORTHO05D008885 6.0e-12 76.6 195 32.3
Sed0028219 Sechium edule HOM05D007036 ORTHO05D008885 6.0e-12 76.6 198 30.3
DCAR_020462 Daucus carota HOM05D007036 ORTHO05D008885 7.8e-12 76.3 199 31.7
Thhalv10003041m.g Eutrema salsugineum HOM05D007036 ORTHO05D008885 7.8e-12 76.3 189 32.8
Phvul.011G085400 Phaseolus vulgaris HOM05D007036 ORTHO05D008885 7.8e-12 76.3 197 31.0
Psat1g099640 Pisum sativum HOM05D007036 ORTHO05D008885 7.8e-12 76.3 200 30.0
Lalb_Chr19g0129471 Lupinus albus HOM05D007036 ORTHO05D008885 1.0e-11 75.9 196 30.6
Prupe.1G064400 Prunus persica HOM05D007036 ORTHO05D008885 1.0e-11 75.9 202 29.7
TPR.G36679 Trifolium pratense HOM05D007036 ORTHO05D008885 1.0e-11 75.9 202 30.7
VMungo0331G1618 Vigna mungo HOM05D007036 ORTHO05D008885 1.0e-11 75.9 193 29.0
VMungo0540G1720 Vigna mungo HOM05D007036 ORTHO05D008885 1.0e-11 75.9 200 29.0
Migut.J00838 Erythranthe guttata HOM05D007036 ORTHO05D008885 1.7e-11 75.1 203 30.0
Glyma.03G035400 Glycine max HOM05D007036 ORTHO05D008885 1.7e-11 75.1 198 29.8
Nitab4.5_0000404g0190 Nicotiana tabacum HOM05D007036 ORTHO05D008885 1.7e-11 75.1 202 30.7
PGSC0003DMG400013697 Solanum tuberosum HOM05D007036 ORTHO05D008885 2.3e-11 74.7 194 32.5
Medtr1g051205 Medicago truncatula HOM05D007036 ORTHO05D008885 3.0e-11 74.3 202 29.2
Zm00001eb035670 Zea mays HOM05D007036 ORTHO05D008885 3.9e-11 73.9 199 32.7
Aqoxy7G02614 Aquilegia oxysepala HOM05D007036 ORTHO05D008885 5.0e-11 73.6 203 29.6
Carub.0016s0003 Capsella rubella HOM05D007036 ORTHO05D008885 5.0e-11 73.6 203 29.6
TWI34G0744 Tripterygium wilfordii HOM05D007036 ORTHO05D008885 5.0e-11 73.6 199 30.2
vmacro22700 Vaccinium macrocarpon HOM05D007036 ORTHO05D008885 5.0e-11 73.6 200 32.0
Sopen05g027850 Solanum pennellii HOM05D007036 ORTHO05D008885 6.6e-11 73.2 193 31.1
Atru.chr7.958 Acer truncatum HOM05D007036 ORTHO05D008885 8.6e-11 72.8 198 29.3
Os08g0520200 Oryza sativa ssp. japonica HOM05D007036 ORTHO05D008885 1.1e-10 72.4 198 31.8
Cfa020750 Carpinus fangiana HOM05D007036 ORTHO05D008885 1.5e-10 72.0 171 32.2
SMO347G0413 Selaginella moellendorffii HOM05D007036 ORTHO05D008885 1.5e-10 72.0 147 32.0
Haze_19103 Corylus avellana HOM05D007036 ORTHO05D008885 1.9e-10 71.6 171 31.6
Pp3c3_31860 Physcomitrium patens HOM05D007036 ORTHO05D008885 2.5e-10 71.2 110 30.9
CiPaw.16G103900 Carya illinoinensis HOM05D007036 ORTHO05D008885 5.6e-10 70.1 189 28.6
FAN07G1271 Fragaria x ananassa HOM05D007036 ORTHO05D008885 7.3e-10 69.7 183 30.1
PSO063G5690 Papaver somniferum HOM05D007036 ORTHO05D008885 7.3e-10 69.7 180 32.2
CARHR153640 Cardamine hirsuta HOM05D007036 ORTHO05D008885 6.2e-09 66.6 199 29.1
CDE02G1188 Ceratophyllum demersum HOM05D007036 ORTHO05D004232 5.2e-08 63.5 170 31.2
Medtr5g068170 Medicago truncatula HOM05D007036 ORTHO05D008885 1.2e-07 62.4 202 27.7
A02p10540 Brassica napus HOM05D007897 ORTHO05D010061 3.4e-07 60.8 60 50.0
Gohir.D01G146401 Gossypium hirsutum HOM05D007897 ORTHO05D010061 9.8e-07 59.3 85 40.0
Gohir.D07G125650 Gossypium hirsutum HOM05D007897 ORTHO05D010061 9.8e-07 59.3 83 39.8
Gorai.001G135500 Gossypium raimondii HOM05D007897 ORTHO05D010061 9.8e-07 59.3 86 38.4
Hund24443 Selenicereus undatus HOM05D007897 ORTHO05D010061 1.3e-06 58.9 86 37.2
Gohir.D13G096925 Gossypium hirsutum HOM05D007897 ORTHO05D010061 2.2e-06 58.2 113 32.7
Gorai.002G182100 Gossypium raimondii HOM05D007897 ORTHO05D010061 3.7e-06 57.4 83 38.6
CSS0018855 Camellia sinensis var. sinensis HOM05D007036 ORTHO05D008885 8.3e-06 56.2 197 27.9


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