Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0807G062 Amborella trichopoda HOM05D006770 ORTHO05D008356 2.4e-301 1038.1 554 100.0
TAR625G0814 Trochodendron aralioides HOM05D006770 ORTHO05D008356 3.0e-142 509.6 506 53.8
PSO541G3292 Papaver somniferum HOM05D006770 ORTHO05D008356 1.3e-140 504.2 505 53.7
Nn5g30983 Nelumbo nucifera HOM05D006770 ORTHO05D008356 6.3e-140 501.9 501 53.1
PSO675G2016 Papaver somniferum HOM05D006770 ORTHO05D008356 1.2e-138 497.7 488 53.7
QL02p014697 Quercus lobata HOM05D006770 ORTHO05D008356 3.3e-133 479.6 538 50.6
Aqoxy6G01625 Aquilegia oxysepala HOM05D006770 ORTHO05D008356 7.0e-131 471.9 496 51.0
CSS0047097 Camellia sinensis var. sinensis HOM05D006770 ORTHO05D008356 5.9e-130 468.8 515 50.1
CDE04G3028 Ceratophyllum demersum HOM05D006770 ORTHO05D008356 2.5e-128 463.4 493 50.5
CiPaw.07G136700 Carya illinoinensis HOM05D006770 ORTHO05D008356 3.6e-127 459.5 512 50.6
Haze_22817 Corylus avellana HOM05D006770 ORTHO05D008356 8.0e-127 458.4 548 47.6
Sc02g0009170 Simmondsia chinensis HOM05D006770 ORTHO05D008356 8.0e-127 458.4 515 49.5
Cfa014101 Carpinus fangiana HOM05D006770 ORTHO05D008356 1.1e-125 454.5 446 55.2
Potri.005G252300 Populus trichocarpa HOM05D006770 ORTHO05D008356 1.1e-125 454.5 508 49.8
Atru.chr13.120 Acer truncatum HOM05D006770 ORTHO05D008356 7.4e-125 451.8 490 51.6
COL.COLO4_36416 Corchorus olitorius HOM05D006770 ORTHO05D008356 1.7e-124 450.7 475 50.7
Ciclev10000935m.g Citrus clementina HOM05D006770 ORTHO05D008356 2.8e-124 449.9 503 48.9
Aa31LG2G8050 Aethionema arabicum HOM05D006770 ORTHO05D008356 1.4e-123 447.6 478 50.6
Thecc.08G061300 Theobroma cacao HOM05D006770 ORTHO05D008356 1.4e-123 447.6 506 49.8
MD00G1136800 Malus domestica HOM05D006770 ORTHO05D008356 3.1e-123 446.4 491 50.1
Sabra05G0195800 Salix brachista HOM05D006770 ORTHO05D008356 3.5e-122 443.0 511 49.1
RcHm_v2.0_Chr5g0066911 Rosa chinensis HOM05D006770 ORTHO05D008356 1.0e-121 441.4 495 49.5
EL10Ac1g01921 Beta vulgaris HOM05D006770 ORTHO05D008356 1.3e-121 441.0 517 48.7
TWI79G0343 Tripterygium wilfordii HOM05D006770 ORTHO05D008356 1.3e-121 441.0 508 48.0
AUR62035131 Chenopodium quinoa HOM05D006770 ORTHO05D008356 1.7e-121 440.7 477 50.9
Manes.17G081600 Manihot esculenta HOM05D006770 ORTHO05D008356 1.7e-121 440.7 493 50.1
Prupe.5G010100 Prunus persica HOM05D006770 ORTHO05D008356 2.2e-121 440.3 497 49.3
Duzib041G0267 Durio zibethinus HOM05D006770 ORTHO05D008356 5.5e-120 435.6 486 49.6
Hund01783 Selenicereus undatus HOM05D006770 ORTHO05D008356 5.5e-120 435.6 515 46.6
Sc02g0009150 Simmondsia chinensis HOM05D006770 ORTHO05D008356 9.4e-120 434.9 514 47.9
Gohir.A11G329900 Gossypium hirsutum HOM05D006770 ORTHO05D008356 2.1e-119 433.7 494 48.2
THA.LOC104813750 Tarenaya hassleriana HOM05D006770 ORTHO05D008356 1.4e-118 431.0 494 48.8
Manes.05G095800 Manihot esculenta HOM05D006770 ORTHO05D008356 1.8e-118 430.6 499 49.3
Rhsim13G0054100 Rhododendron simsii HOM05D006770 ORTHO05D008356 1.8e-118 430.6 518 47.5
AUR62040821 Chenopodium quinoa HOM05D006770 ORTHO05D008356 2.3e-118 430.3 478 50.6
Glyma.07G217000 Glycine max HOM05D006770 ORTHO05D008356 3.0e-118 429.9 516 46.5
Dinv31957 Davidia involucrata HOM05D006770 ORTHO05D008356 6.8e-118 428.7 349 61.9
Medtr4g084940 Medicago truncatula HOM05D006770 ORTHO05D008356 6.8e-118 428.7 525 45.5
Gorai.006G274800 Gossypium raimondii HOM05D006770 ORTHO05D008356 8.8e-118 428.3 494 47.6
CANSAT64G1545 Cannabis sativa HOM05D006770 ORTHO05D008356 1.5e-117 427.6 524 46.2
FAN18G3713 Fragaria x ananassa HOM05D006770 ORTHO05D008356 1.5e-117 427.6 493 47.7
FAN08G2065 Fragaria x ananassa HOM05D006770 ORTHO05D008356 2.0e-117 427.2 485 48.7
FvH4_5g25440 Fragaria vesca HOM05D006770 ORTHO05D008356 2.6e-117 426.8 493 47.7
FAN13G3072 Fragaria x ananassa HOM05D006770 ORTHO05D008356 2.6e-117 426.8 493 48.5
Phvul.001G002700 Phaseolus vulgaris HOM05D006770 ORTHO05D008356 4.4e-117 426.0 412 52.7
BolC7t43787H Brassica oleracea HOM05D006770 ORTHO05D008356 1.3e-116 424.5 492 49.2
Glyma.20G013900 Glycine max HOM05D006770 ORTHO05D008356 1.3e-116 424.5 421 51.8
Gorai.004G294200 Gossypium raimondii HOM05D006770 ORTHO05D008356 2.2e-116 423.7 494 47.0
SalBow7G3490 Salvia bowleyana HOM05D006770 ORTHO05D008356 2.2e-116 423.7 498 47.0
BcaC06g34103 Brassica carinata HOM05D006770 ORTHO05D008356 3.7e-116 422.9 482 50.2
C07p32660 Brassica napus HOM05D006770 ORTHO05D008356 3.7e-116 422.9 494 49.2
VMungo0251G0866 Vigna mungo HOM05D006770 ORTHO05D008356 6.3e-116 422.2 519 46.1
Thhalv10004104m.g Eutrema salsugineum HOM05D006770 ORTHO05D008356 8.3e-116 421.8 477 50.9
BcaC06g31269 Brassica carinata HOM05D006770 ORTHO05D008356 1.4e-115 421.0 483 50.1
ECA246G3919 Erigeron canadensis HOM05D006770 ORTHO05D008356 1.8e-115 420.6 364 59.6
Sopen02g019170 Solanum pennellii HOM05D006770 ORTHO05D008356 9.1e-115 418.3 498 47.0
CAN.G79.18 Capsicum annuum HOM05D006770 ORTHO05D008356 1.2e-114 417.9 505 46.3
Nitab4.5_0001583g0140 Nicotiana tabacum HOM05D006770 ORTHO05D008356 1.2e-114 417.9 501 47.5
Oeu032124.1 Olea europaea HOM05D006770 ORTHO05D008356 1.6e-114 417.5 480 49.2
PGR031G0937 Punica granatum HOM05D006770 ORTHO05D008356 1.6e-114 417.5 462 51.1
CAN.G79.22 Capsicum annuum HOM05D006770 ORTHO05D008356 2.0e-114 417.2 505 46.5
Solyc02g070010.1 Solanum lycopersicum HOM05D006770 ORTHO05D008356 2.0e-114 417.2 498 47.0
CsaV3_1G014370 Cucumis sativus L. HOM05D006770 ORTHO05D008356 5.9e-114 415.6 491 47.9
Lsat_1_v5_gn_3_16821 Lactuca sativa HOM05D006770 ORTHO05D008356 7.7e-114 415.2 407 52.8
Gohir.D08G007000 Gossypium hirsutum HOM05D006770 ORTHO05D008356 1.3e-113 414.5 483 47.2
A06p43970 Brassica napus HOM05D006770 ORTHO05D008356 2.9e-113 413.3 479 49.5
Lalb_Chr05g0219451 Lupinus albus HOM05D006770 ORTHO05D008356 3.8e-113 412.9 481 48.2
Sp2g13280 Schrenkiella parvula HOM05D006770 ORTHO05D008356 6.5e-113 412.1 482 48.8
Nitab4.5_0001225g0180 Nicotiana tabacum HOM05D006770 ORTHO05D008356 8.5e-113 411.8 500 46.6
Ca_25485_v3 Cicer arietinum L. HOM05D006770 ORTHO05D008356 1.5e-112 411.0 493 46.7
Lj4g0024175 Lotus japonicus HOM05D006770 ORTHO05D008356 1.9e-112 410.6 485 47.4
HPP92_007114 Vanilla planifolia HOM05D006770 ORTHO05D008356 3.2e-112 409.8 354 58.5
Gohir.A13G000201 Gossypium hirsutum HOM05D006770 ORTHO05D008356 4.2e-112 409.5 423 50.4
HanXRQChr06g0167391 Helianthus annuus HOM05D006770 ORTHO05D008356 4.2e-112 409.5 356 59.0
Gohir.D08G275542 Gossypium hirsutum HOM05D006770 ORTHO05D008356 7.2e-112 408.7 423 50.1
MELO3C004826.2 Cucumis melo HOM05D006770 ORTHO05D008356 2.1e-111 407.1 490 47.3
PGSC0003DMG400021117 Solanum tuberosum HOM05D006770 ORTHO05D008356 2.1e-111 407.1 473 48.0
AT2G01860 Arabidopsis thaliana HOM05D006770 ORTHO05D008356 2.7e-111 406.8 520 47.1
Migut.M00215 Erythranthe guttata HOM05D006770 ORTHO05D008356 2.7e-111 406.8 482 48.5
AL5G10970 Arabidopsis lyrata HOM05D006770 ORTHO05D008356 8.0e-111 405.2 483 49.5
Gohir.A01G231900 Gossypium hirsutum HOM05D006770 ORTHO05D008356 1.4e-110 404.4 494 46.4
BraA06t27272Z Brassica rapa HOM05D006770 ORTHO05D008356 1.8e-110 404.1 479 48.9
TPR.G35412 Trifolium pratense HOM05D006770 ORTHO05D008356 3.0e-110 403.3 521 44.7
CARHR144420 Cardamine hirsuta HOM05D006770 ORTHO05D008356 2.0e-109 400.6 483 48.7
Cc09_g04530 Coffea canephora HOM05D006770 ORTHO05D008356 3.4e-109 399.8 509 46.2
Carub.0005s0082 Capsella rubella HOM05D006770 ORTHO05D008356 6.3e-108 395.6 491 48.1
Psat7g128200 Pisum sativum HOM05D006770 ORTHO05D008356 1.1e-107 394.8 491 45.0
Gorai.009G456100 Gossypium raimondii HOM05D006770 ORTHO05D008356 7.0e-107 392.1 494 45.1
DCAR_024417 Daucus carota HOM05D006770 ORTHO05D008356 2.7e-106 390.2 479 46.1
Ah.00g000990 Amaranthus hybridus HOM05D006770 ORTHO05D008356 4.5e-106 389.4 484 47.5
vmacro02830 Vaccinium macrocarpon HOM05D006770 ORTHO05D008356 1.3e-105 387.9 337 59.1
SEGI_37300 Sequoiadendron giganteum HOM05D006770 ORTHO05D008356 2.3e-105 387.1 405 49.6
Peaxi162Scf00670g00024 Petunia axillaris HOM05D006770 ORTHO05D008356 1.9e-104 384.0 355 54.4
Zm00001eb391890 Zea mays HOM05D006770 ORTHO05D008356 2.2e-100 370.5 370 54.1
Actinidia23351 Actinidia chinensis HOM05D006770 ORTHO05D008356 1.8e-99 367.5 438 48.9
Atru.chr13.118 Acer truncatum HOM05D006770 ORTHO05D008356 7.8e-98 362.1 490 44.7
Gorai.007G379700 Gossypium raimondii HOM05D006770 ORTHO05D008356 1.7e-97 360.9 449 45.2
Os02g0118000 Oryza sativa ssp. japonica HOM05D006770 ORTHO05D008356 2.3e-97 360.5 371 53.9
MD16G1284100 Malus domestica HOM05D006770 ORTHO05D008356 5.8e-85 319.3 439 44.2
Lj9P204T39 Lonicera japonica HOM05D006770 ORTHO05D008356 9.8e-85 318.5 298 56.0
SGA_v2.0_scaffold476G52129 Striga asiatica HOM05D006770 ORTHO05D008356 1.0e-81 308.5 423 42.6
SGA_v2.0_scaffold538G52786 Striga asiatica HOM05D006770 ORTHO05D008356 1.0e-81 308.5 475 40.8
SEGI_07142 Sequoiadendron giganteum HOM05D006770 ORTHO05D008356 7.3e-72 275.8 395 40.5
Sed0018053 Sechium edule HOM05D006770 ORTHO05D008356 6.4e-68 262.7 343 47.8
Gohir.D11G349500 Gossypium hirsutum HOM05D006770 ORTHO05D008356 8.1e-63 245.7 205 58.0
Gohir.A06G000350 Gossypium hirsutum HOM05D006770 ORTHO05D008356 2.7e-50 204.1 192 53.1
Actinidia12910 Actinidia chinensis HOM05D006770 ORTHO05D008356 4.6e-42 176.8 344 37.8
AagrBONN_evm.TU.Sc2ySwM_117.3058 Anthoceros agrestis HOM05D006770 ORTHO05D008356 3.7e-39 167.2 316 34.2
ClCG01G012950 Citrullus lanatus HOM05D006770 ORTHO05D008356 1.7e-36 158.3 222 44.1
CAN.G733.12 Capsicum annuum HOM05D006770 ORTHO05D008356 1.1e-32 145.6 153 50.3
Mapoly0166s0014 Marchantia polymorpha HOM05D006770 ORTHO05D008356 2.9e-20 104.4 230 30.4
CAN.G332.6 Capsicum annuum HOM05D006770 ORTHO05D008356 1.0e-17 95.9 106 44.3
VMungo0331G1801 Vigna mungo HOM05D002295 ORTHO05D008356 1.0e-17 95.9 89 51.7
CBR_g51330 Chara braunii HOM05D009772 ORTHO05D000353 3.9e-17 94.0 300 25.0
Gohir.D02G000400 Gossypium hirsutum HOM05D006770 ORTHO05D008356 1.5e-13 82.0 189 31.2
VMungo0720G0800 Vigna mungo HOM05D006770 ORTHO05D008356 5.5e-11 73.6 156 32.7
PGR142G2774 Punica granatum HOM05D000001 ORTHO05D010435 1.8e-06 58.5 263 23.2
SGA_v2.0_scaffold9G05037 Striga asiatica HOM05D003177 ORTHO05D003481 7.0e-06 56.6 151 23.8


User provided reference genes

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