Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 3.7e-214 748.0 404 100.0
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 5.7e-82 308.9 349 50.1
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 2.4e-80 303.5 338 48.8
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 1.5e-79 300.8 336 49.4
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 2.6e-79 300.1 332 52.1
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 1.0e-78 298.1 340 48.5
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 2.9e-78 296.6 338 49.4
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 2.9e-78 296.6 337 49.6
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 1.9e-77 293.9 319 50.2
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 2.5e-77 293.5 346 47.7
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 2.5e-77 293.5 352 47.2
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 9.4e-77 291.6 349 46.4
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 6.1e-76 288.9 340 46.5
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 1.0e-75 288.1 353 45.3
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 2.3e-75 287.0 343 47.5
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 3.0e-75 286.6 339 46.3
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 3.9e-75 286.2 346 48.3
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 6.7e-75 285.4 348 47.4
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 6.7e-75 285.4 327 48.0
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 1.5e-74 284.3 337 47.8
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 2.0e-74 283.9 338 48.2
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 2.6e-74 283.5 329 48.9
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 3.3e-74 283.1 346 47.7
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 4.4e-74 282.7 324 49.1
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 5.7e-74 282.3 361 44.3
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 7.4e-74 282.0 355 44.2
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 7.4e-74 282.0 355 45.1
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 9.7e-74 281.6 337 48.4
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 1.7e-73 280.8 342 48.8
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 1.7e-73 280.8 344 47.1
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 1.7e-73 280.8 338 48.8
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 2.2e-73 280.4 333 47.7
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 3.7e-73 279.6 340 48.5
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 6.3e-73 278.9 350 44.9
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 6.3e-73 278.9 333 47.4
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 6.3e-73 278.9 347 45.8
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 1.1e-72 278.1 354 44.4
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 1.1e-72 278.1 326 47.9
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 2.4e-72 276.9 335 47.2
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 3.1e-72 276.6 338 46.4
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 3.1e-72 276.6 329 48.6
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 7.0e-72 275.4 339 48.7
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 9.1e-72 275.0 333 48.3
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 1.2e-71 274.6 333 46.5
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 1.2e-71 274.6 333 46.5
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 1.2e-71 274.6 339 45.7
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 1.6e-71 274.2 342 46.2
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 3.5e-71 273.1 333 48.0
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 4.5e-71 272.7 349 46.1
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 5.9e-71 272.3 358 44.7
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 5.9e-71 272.3 340 46.2
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 7.7e-71 271.9 339 46.3
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 1.0e-70 271.6 340 47.6
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 1.0e-70 271.6 326 49.7
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 1.7e-70 270.8 328 46.3
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 2.9e-70 270.0 329 46.2
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 5.0e-70 269.2 341 45.5
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 6.5e-70 268.9 330 48.8
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 6.5e-70 268.9 341 46.0
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 8.5e-70 268.5 334 47.0
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 1.5e-69 267.7 333 46.5
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 4.2e-69 266.2 330 47.9
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 9.4e-69 265.0 347 45.5
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 9.4e-69 265.0 337 46.9
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 2.1e-68 263.8 330 47.6
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 2.7e-68 263.5 343 44.9
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 3.6e-68 263.1 326 46.3
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 3.6e-68 263.1 329 48.0
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 3.6e-68 263.1 344 43.3
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 4.7e-68 262.7 330 47.3
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 8.0e-68 261.9 330 47.3
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 1.8e-67 260.8 329 48.6
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 5.2e-67 259.2 352 43.5
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 5.7e-66 255.8 334 46.4
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 9.7e-66 255.0 347 46.1
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 1.3e-65 254.6 348 43.1
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 1.7e-65 254.2 332 44.9
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 1.7e-65 254.2 356 44.7
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 9.1e-64 248.4 338 44.7
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 1.6e-63 247.7 325 46.2
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 2.0e-63 247.3 375 41.1
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 3.5e-63 246.5 323 47.4
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 2.5e-61 240.4 344 42.4
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 4.0e-59 233.0 345 41.7
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 5.2e-59 232.6 441 35.6
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 4.4e-58 229.6 379 40.6
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 7.5e-58 228.8 213 55.9
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 2.8e-57 226.9 326 42.6
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 1.4e-56 224.6 345 40.3
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 1.6e-55 221.1 282 46.5
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 1.1e-53 214.9 330 42.7
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 1.3e-49 201.4 209 52.2
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 6.1e-44 182.6 358 35.2
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 1.4e-43 181.4 205 49.8
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 2.3e-43 180.6 372 34.4
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 3.2e-40 170.2 236 44.9
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 1.1e-35 155.2 184 46.7
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 4.0e-35 153.3 385 34.5
Hund12782 Selenicereus undatus HOM05D006361 ORTHO05D007824 3.1e-27 127.1 141 48.9
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 3.7e-25 120.2 217 37.8
MBI06_g04759_MAGBIO Magnolia biondii HOM05D006361 ORTHO05D007824 4.1e-24 116.7 96 63.5
arahy.Tifrunner.gnm1.ann1.10LCJA Arachis hypogaea HOM05D006361 ORTHO05D007824 7.1e-24 115.9 290 33.4
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 1.9e-21 107.8 459 24.8
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 9.5e-21 105.5 92 57.6
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 2.2e-17 94.4 105 52.4
Actinidia34046 Actinidia chinensis HOM05D006361 ORTHO05D007824 3.8e-17 93.6 71 64.8
Oeu038968.1 Olea europaea HOM05D006361 ORTHO05D007824 9.2e-16 89.0 182 34.6
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 9.2e-16 89.0 86 55.8
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 2.7e-15 87.4 72 59.7
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 1.0e-14 85.5 62 66.1
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 1.0e-14 85.5 259 26.6
Glyma.10G280900 Glycine max HOM05D006361 ORTHO05D007824 6.6e-14 82.8 226 29.6
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 4.0e-11 73.6 283 26.1
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 3.4e-10 70.5 176 29.5
Cc00_g15950 Coffea canephora HOM05D006361 ORTHO05D007824 1.3e-09 68.6 41 68.3
VMungo1215G0447 Vigna mungo HOM05D006361 ORTHO05D007824 2.9e-09 67.4 43 67.4
Cc00_g35660 Coffea canephora HOM05D006361 ORTHO05D007824 1.4e-08 65.1 42 64.3
VMungo0647G2130 Vigna mungo HOM05D004174 ORTHO05D004624 1.4e-08 65.1 49 61.2
Hma1.2p1_0068F.1_g037180 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 7.1e-08 62.8 59 45.8
Peaxi162Scf00004g03918 Petunia axillaris HOM05D006549 ORTHO05D008080 3.9e-06 57.0 212 24.1


User provided reference genes

Program Settings