Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0807G046 Amborella trichopoda HOM05D006972 ORTHO05D008519 7.6e-101 370.5 192 100.0
TAR628G0904 Trochodendron aralioides HOM05D006972 ORTHO05D008519 3.5e-74 282.0 190 74.2
Sed0027466 Sechium edule HOM05D006972 ORTHO05D008519 1.9e-72 276.2 189 72.5
MELO3C013724.2 Cucumis melo HOM05D006972 ORTHO05D008519 2.5e-72 275.8 189 72.0
Manes.01G155400 Manihot esculenta HOM05D006972 ORTHO05D008519 3.7e-71 271.9 189 69.3
Potri.005G101501 Populus trichocarpa HOM05D006972 ORTHO05D008519 1.1e-70 270.4 184 71.2
GSVIVG01026641001 Vitis vinifera HOM05D006972 ORTHO05D008519 1.1e-70 270.4 188 70.2
Aqoxy5G01011 Aquilegia oxysepala HOM05D006972 ORTHO05D008519 2.4e-70 269.2 189 70.9
CsaV3_3G000300 Cucumis sativus L. HOM05D006972 ORTHO05D008519 5.3e-70 268.1 189 70.4
Prupe.7G182900 Prunus persica HOM05D006972 ORTHO05D008519 5.3e-70 268.1 189 67.7
CSS0043244 Camellia sinensis var. sinensis HOM05D006972 ORTHO05D008519 6.9e-70 267.7 189 68.8
Cfa007077 Carpinus fangiana HOM05D006972 ORTHO05D008519 6.9e-70 267.7 190 67.4
ClCG10G000270 Citrullus lanatus HOM05D006972 ORTHO05D008519 2.6e-69 265.8 185 70.8
Nn5g30989 Nelumbo nucifera HOM05D006972 ORTHO05D008519 2.6e-69 265.8 176 74.4
Nitab4.5_0000495g0120 Nicotiana tabacum HOM05D006972 ORTHO05D008519 3.4e-69 265.4 189 70.9
Oeu012451.1 Olea europaea HOM05D006972 ORTHO05D008519 3.4e-69 265.4 189 67.2
Nitab4.5_0005297g0020 Nicotiana tabacum HOM05D006972 ORTHO05D008519 4.5e-69 265.0 189 70.4
HPP92_026034 Vanilla planifolia HOM05D006972 ORTHO05D008519 4.5e-69 265.0 185 68.6
QL06p052953 Quercus lobata HOM05D006972 ORTHO05D008519 1.3e-68 263.5 211 63.0
Atru.chr3.134 Acer truncatum HOM05D006972 ORTHO05D008519 2.2e-68 262.7 189 70.9
Eucgr.I02225 Eucalyptus grandis HOM05D006972 ORTHO05D008519 2.2e-68 262.7 189 69.3
CANSAT25G3183 Cannabis sativa HOM05D006972 ORTHO05D008519 2.9e-68 262.3 183 68.9
Haze_03655 Corylus avellana HOM05D006972 ORTHO05D008519 2.9e-68 262.3 181 69.1
Rhsim10G0195900 Rhododendron simsii HOM05D006972 ORTHO05D008519 6.5e-68 261.2 186 68.8
TWI73G0968 Tripterygium wilfordii HOM05D006972 ORTHO05D008519 6.5e-68 261.2 187 67.9
Actinidia17360 Actinidia chinensis HOM05D006972 ORTHO05D008519 1.1e-67 260.4 189 69.3
MSTRG.3630 Avicennia marina HOM05D006972 ORTHO05D008519 1.1e-67 260.4 189 68.8
Cpa.g.sc365.5 Carica papaya HOM05D006972 ORTHO05D008519 1.1e-67 260.4 193 67.4
CiPaw.08G181600 Carya illinoinensis HOM05D006972 ORTHO05D008519 1.1e-67 260.4 189 66.7
Glyma.01G158800 Glycine max HOM05D006972 ORTHO05D008519 1.1e-67 260.4 189 70.4
RcHm_v2.0_Chr2g0097181 Rosa chinensis HOM05D006972 ORTHO05D008519 1.9e-67 259.6 189 66.1
PSO541G2195 Papaver somniferum HOM05D006972 ORTHO05D008519 2.5e-67 259.2 184 72.3
Cc07_g11850 Coffea canephora HOM05D006972 ORTHO05D008519 3.2e-67 258.8 186 70.4
Duzib147G0479 Durio zibethinus HOM05D006972 ORTHO05D008519 4.2e-67 258.5 189 66.7
EL10Ac5g11121 Beta vulgaris HOM05D006972 ORTHO05D008519 7.1e-67 257.7 189 66.1
SalBow5G0785 Salvia bowleyana HOM05D006972 ORTHO05D008519 7.1e-67 257.7 189 65.6
MBI05_g14344_MAGBIO Magnolia biondii HOM05D006972 ORTHO05D008519 9.3e-67 257.3 189 71.4
Solyc03g032120.3 Solanum lycopersicum HOM05D006972 ORTHO05D008519 9.3e-67 257.3 189 68.8
TPR.G33865 Trifolium pratense HOM05D006972 ORTHO05D008519 1.6e-66 256.5 189 69.3
Lsat_1_v5_gn_2_73640 Lactuca sativa HOM05D006972 ORTHO05D008519 3.5e-66 255.4 189 67.7
Zm00001eb002450 Zea mays HOM05D006972 ORTHO05D008519 3.5e-66 255.4 186 67.2
Gohir.A07G171100 Gossypium hirsutum HOM05D006972 ORTHO05D008519 1.0e-65 253.8 185 64.9
Thecc.01G005600 Theobroma cacao HOM05D006972 ORTHO05D008519 1.0e-65 253.8 189 66.1
Lalb_Chr16g0380011 Lupinus albus HOM05D006972 ORTHO05D008519 1.3e-65 253.4 189 68.8
AUR62021571 Chenopodium quinoa HOM05D006972 ORTHO05D008519 1.8e-65 253.1 188 64.9
Ca_24981_v3 Cicer arietinum L. HOM05D006972 ORTHO05D008519 1.8e-65 253.1 184 69.0
Ciclev10026547m.g Citrus clementina HOM05D006972 ORTHO05D008519 1.8e-65 253.1 185 68.1
Psat2g148200 Pisum sativum HOM05D006972 ORTHO05D008519 2.3e-65 252.7 189 68.8
FAN19G2622 Fragaria x ananassa HOM05D006972 ORTHO05D008519 3.0e-65 252.3 191 63.4
CAN.G354.14 Capsicum annuum HOM05D006972 ORTHO05D008519 3.9e-65 251.9 175 72.0
Gohir.D07G177900 Gossypium hirsutum HOM05D006972 ORTHO05D008519 5.1e-65 251.5 189 64.0
Gorai.001G199000 Gossypium raimondii HOM05D006972 ORTHO05D008519 5.1e-65 251.5 185 64.9
PSO675G3277 Papaver somniferum HOM05D006972 ORTHO05D008519 5.1e-65 251.5 167 74.3
Phvul.002G116601 Phaseolus vulgaris HOM05D006972 ORTHO05D008519 5.1e-65 251.5 189 69.3
vmacro20633 Vaccinium macrocarpon HOM05D006972 ORTHO05D008519 5.1e-65 251.5 186 65.1
VMungo1215G1992 Vigna mungo HOM05D006972 ORTHO05D008519 5.1e-65 251.5 189 69.8
Migut.L00961 Erythranthe guttata HOM05D006972 ORTHO05D008519 1.5e-64 250.0 190 64.2
HanXRQChr14g0442531 Helianthus annuus HOM05D006972 ORTHO05D008519 2.5e-64 249.2 189 66.1
AUR62008520 Chenopodium quinoa HOM05D006972 ORTHO05D008519 5.7e-64 248.1 188 63.8
CDE04G1133 Ceratophyllum demersum HOM05D006972 ORTHO05D008519 1.6e-63 246.5 175 69.1
Lj2g0018473 Lotus japonicus HOM05D006972 ORTHO05D008519 2.8e-63 245.7 175 72.0
THA.LOC104826441 Tarenaya hassleriana HOM05D006972 ORTHO05D008519 2.8e-63 245.7 181 66.9
Ah.02g113990 Amaranthus hybridus HOM05D006972 ORTHO05D008519 3.7e-63 245.4 184 64.7
Hund19696 Selenicereus undatus HOM05D006972 ORTHO05D008519 8.2e-63 244.2 189 64.0
ECA238G2655 Erigeron canadensis HOM05D006972 ORTHO05D008519 1.5e-61 240.0 186 64.5
arahy.Tifrunner.gnm1.ann1.B19VPR Arachis hypogaea HOM05D006972 ORTHO05D008519 2.6e-61 239.2 161 75.2
arahy.Tifrunner.gnm1.ann1.K20VQB Arachis hypogaea HOM05D006972 ORTHO05D008519 2.6e-61 239.2 161 75.2
AL8G45620 Arabidopsis lyrata HOM05D006972 ORTHO05D008519 4.5e-61 238.4 181 64.1
AT5G66005 Arabidopsis thaliana HOM05D006972 ORTHO05D008519 2.2e-60 236.1 181 63.5
COL.COLO4_24144 Corchorus olitorius HOM05D006972 ORTHO05D008519 1.9e-59 233.0 167 68.3
SGA_v2.0_scaffold132G34519 Striga asiatica HOM05D006972 ORTHO05D008519 4.2e-59 231.9 171 66.1
Haze_03661 Corylus avellana HOM05D006972 ORTHO05D008519 1.4e-57 226.9 153 71.9
Sc03g0003950 Simmondsia chinensis HOM05D006972 ORTHO05D008519 4.8e-55 218.4 153 68.0
Medtr5g024200 Medicago truncatula HOM05D006972 ORTHO05D008519 2.4e-54 216.1 166 69.3
FvH4_1g10330 Fragaria vesca HOM05D006972 ORTHO05D008519 9.1e-54 214.2 153 66.7
FAN23G2574 Fragaria x ananassa HOM05D006972 ORTHO05D008519 2.0e-53 213.0 226 51.3
Carub.0008s2851 Capsella rubella HOM05D006972 ORTHO05D008519 2.6e-53 212.6 197 55.8
RcHm_v2.0_Chr2g0090391 Rosa chinensis HOM05D006972 ORTHO05D008519 2.0e-48 196.4 138 68.8
RcHm_v2.0_Chr1g0346531 Rosa chinensis HOM05D006972 ORTHO05D008519 3.3e-48 195.7 138 68.1
Mapoly0114s0024 Marchantia polymorpha HOM05D006972 ORTHO05D008519 1.4e-41 173.7 210 48.1
unitig_747.g21812 Utricularia gibba HOM05D006972 ORTHO05D008519 3.0e-41 172.6 202 48.0
MD15G1231300 Malus domestica HOM05D006972 ORTHO05D008519 2.0e-40 169.9 118 66.1
Peaxi162Scf00122g02416 Petunia axillaris HOM05D006972 ORTHO05D008519 2.0e-40 169.9 116 69.8
Os03g0130750 Oryza sativa ssp. japonica HOM05D006972 ORTHO05D008519 1.7e-39 166.8 130 61.5
FAN26G0227 Fragaria x ananassa HOM05D006972 ORTHO05D008519 2.6e-37 159.5 125 64.0
FAN28G2862 Fragaria x ananassa HOM05D006972 ORTHO05D008519 5.9e-37 158.3 109 69.7
SMO352G0055 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 2.0e-32 143.3 133 57.1
Sopen03g005970 Solanum pennellii HOM05D006972 ORTHO05D008519 2.8e-31 139.4 103 69.9
Cre16.g682050 Chlamydomonas reinhardtii HOM05D006972 ORTHO05D008519 1.6e-29 133.7 190 44.2
CANSAT35G0485 Cannabis sativa HOM05D006972 ORTHO05D008519 4.2e-27 125.6 88 68.2
Lsat_1_v5_gn_5_10160 Lactuca sativa HOM05D006972 ORTHO05D008519 2.1e-26 123.2 133 52.6
RcHm_v2.0_Chr5g0047551 Rosa chinensis HOM05D006972 ORTHO05D008519 1.8e-25 120.2 75 73.3
RcHm_v2.0_Chr5g0015201 Rosa chinensis HOM05D006972 ORTHO05D008519 2.0e-24 116.7 70 77.1
Glyma.11G085800 Glycine max HOM05D006972 ORTHO05D008519 7.5e-24 114.8 135 50.4
Mapoly0023s0154 Marchantia polymorpha HOM05D006972 ORTHO05D008519 1.8e-22 110.2 187 35.3
MCO16G109 Micromonas commoda HOM05D006972 ORTHO05D008519 2.4e-22 109.8 180 38.9
SMO147G0393 Selaginella moellendorffii HOM05D006972 ORTHO05D008519 7.0e-22 108.2 130 41.5
MD15G1231400 Malus domestica HOM05D006972 ORTHO05D008519 1.3e-20 104.0 73 65.8
Pp3c7_7150 Physcomitrium patens HOM05D006972 ORTHO05D008519 1.3e-20 104.0 187 34.8
Actinidia22899 Actinidia chinensis HOM05D006972 ORTHO05D008519 2.9e-20 102.8 72 69.4
Pp3c11_19180 Physcomitrium patens HOM05D006972 ORTHO05D008519 5.0e-20 102.1 187 34.2
CBR_g19759 Chara braunii HOM05D006972 ORTHO05D008519 1.0e-17 94.4 135 44.4
Lsat_1_v5_gn_1_125281 Lactuca sativa HOM05D006972 ORTHO05D008519 7.5e-16 88.2 57 70.2
PRCOL_00004399 Prasinoderma coloniale HOM05D006972 ORTHO05D008519 2.2e-15 86.7 184 37.0
Lsat_1_v5_gn_8_30121 Lactuca sativa HOM05D006972 ORTHO05D008519 1.7e-12 77.0 60 70.0
arahy.Tifrunner.gnm1.ann1.J6JT3S Arachis hypogaea HOM05D006972 ORTHO05D008519 4.3e-11 72.4 55 61.8
arahy.Tifrunner.gnm1.ann1.9GY3HT Arachis hypogaea HOM05D006972 ORTHO05D008519 1.2e-10 70.9 73 50.7
MD02G1111700 Malus domestica HOM05D006972 ORTHO05D008519 1.8e-09 67.0 46 63.0
arahy.Tifrunner.gnm1.ann1.A1T4XS Arachis hypogaea HOM05D006972 ORTHO05D008519 1.3e-07 60.8 58 51.7
AagrBONN_evm.TU.Sc2ySwM_228.4669 Anthoceros agrestis HOM05D006972 ORTHO05D008519 2.4e-06 56.6 70 41.4


User provided reference genes

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