Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0807G036 Amborella trichopoda HOM05D005549 ORTHO05D006771 1.5e-81 306.2 159 100.0
MBI16_g05472_MAGBIO Magnolia biondii HOM05D005549 ORTHO05D006771 5.4e-36 154.8 106 67.0
Aqoxy3G02864 Aquilegia oxysepala HOM05D005549 ORTHO05D006771 1.5e-33 146.7 107 62.6
Prupe.5G171000 Prunus persica HOM05D005549 ORTHO05D006771 5.6e-33 144.8 103 63.1
Hma1.2p1_0046F.1_g026660 Hydrangea macrophylla HOM05D005549 ORTHO05D006771 3.6e-32 142.1 107 61.7
Nn4g25809 Nelumbo nucifera HOM05D005549 ORTHO05D006771 1.4e-31 140.2 103 64.1
Sabra14G0003300 Salix brachista HOM05D005549 ORTHO05D006771 1.4e-31 140.2 104 61.5
Actinidia19108 Actinidia chinensis HOM05D005549 ORTHO05D006771 5.2e-31 138.3 107 60.7
CDE02G3271 Ceratophyllum demersum HOM05D005549 ORTHO05D006771 5.2e-31 138.3 113 56.6
TAR622G1114 Trochodendron aralioides HOM05D005549 ORTHO05D006771 1.2e-30 137.1 107 59.8
Dinv38568 Davidia involucrata HOM05D005549 ORTHO05D006771 1.5e-30 136.7 103 60.2
MD06G1171600 Malus domestica HOM05D005549 ORTHO05D006771 2.0e-30 136.3 103 60.2
GSVIVG01007718001 Vitis vinifera HOM05D002875 ORTHO05D003215 2.0e-30 136.3 107 59.8
CANSAT25G1426 Cannabis sativa HOM05D005549 ORTHO05D006771 2.6e-30 136.0 107 59.8
FvH4_5g05540 Fragaria vesca HOM05D005549 ORTHO05D006771 2.6e-30 136.0 104 61.5
FAN18G0652 Fragaria x ananassa HOM05D005549 ORTHO05D006771 2.6e-30 136.0 104 61.5
Potri.014G000900 Populus trichocarpa HOM05D005549 ORTHO05D006771 2.6e-30 136.0 104 60.6
FAN08G3612 Fragaria x ananassa HOM05D005549 ORTHO05D006771 5.8e-30 134.8 104 59.6
FAN13G1520 Fragaria x ananassa HOM05D005549 ORTHO05D006771 5.8e-30 134.8 104 59.6
FAN04G2905 Fragaria x ananassa HOM05D005549 ORTHO05D006771 9.9e-30 134.0 104 59.6
COL.COLO4_30080 Corchorus olitorius HOM05D005549 ORTHO05D006771 1.7e-29 133.3 103 56.3
HPP92_021890 Vanilla planifolia HOM05D005549 ORTHO05D006771 1.7e-29 133.3 107 62.6
Nitab4.5_0001239g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 2.2e-29 132.9 118 54.2
DCAR_016476 Daucus carota HOM05D005549 ORTHO05D006771 2.9e-29 132.5 104 59.6
FAN18G1717 Fragaria x ananassa HOM05D005549 ORTHO05D006771 2.9e-29 132.5 104 60.6
Sc12g0005230 Simmondsia chinensis HOM05D005549 ORTHO05D006771 2.9e-29 132.5 113 55.8
Ciclev10020953m.g Citrus clementina HOM05D005549 ORTHO05D006771 3.7e-29 132.1 104 58.7
arahy.Tifrunner.gnm1.ann1.386HL4 Arachis hypogaea HOM05D005549 ORTHO05D006771 4.9e-29 131.7 107 59.8
arahy.Tifrunner.gnm1.ann1.7VTX70 Arachis hypogaea HOM05D005549 ORTHO05D006771 4.9e-29 131.7 107 59.8
arahy.Tifrunner.gnm1.ann1.BH3JLW Arachis hypogaea HOM05D005549 ORTHO05D006771 4.9e-29 131.7 107 59.8
Cc04_g12210 Coffea canephora HOM05D005549 ORTHO05D006771 4.9e-29 131.7 107 58.9
Duzib205G0052 Durio zibethinus HOM05D005549 ORTHO05D006771 6.4e-29 131.3 100 60.0
Hund09451 Selenicereus undatus HOM05D005549 ORTHO05D006771 6.4e-29 131.3 114 54.4
EL10Ac5g10725 Beta vulgaris HOM05D005549 ORTHO05D006771 1.1e-28 130.6 104 60.6
ClCG06G017070 Citrullus lanatus HOM05D005549 ORTHO05D006771 1.1e-28 130.6 104 58.7
Thecc.03G015300 Theobroma cacao HOM05D005549 ORTHO05D006771 1.4e-28 130.2 107 56.1
Lsat_1_v5_gn_4_75780 Lactuca sativa HOM05D005549 ORTHO05D006771 1.9e-28 129.8 117 52.1
Manes.06G106600 Manihot esculenta HOM05D005549 ORTHO05D006771 2.4e-28 129.4 104 60.6
Atru.chr9.2502 Acer truncatum HOM05D005549 ORTHO05D006771 3.2e-28 129.0 102 56.9
Atru.chr9.2511 Acer truncatum HOM05D005549 ORTHO05D006771 3.2e-28 129.0 102 56.9
PGSC0003DMG400028373 Solanum tuberosum HOM05D005549 ORTHO05D006771 3.2e-28 129.0 100 59.0
vmacro16625 Vaccinium macrocarpon HOM05D005549 ORTHO05D006771 3.2e-28 129.0 107 57.9
MELO3C017092.2 Cucumis melo HOM05D005549 ORTHO05D006771 9.2e-28 127.5 104 56.7
Glyma.09G077900 Glycine max HOM05D005549 ORTHO05D006771 9.2e-28 127.5 100 59.0
Glyma.15G218700 Glycine max HOM05D005549 ORTHO05D006771 9.2e-28 127.5 100 59.0
Nitab4.5_0002265g0110 Nicotiana tabacum HOM05D005549 ORTHO05D006771 1.2e-27 127.1 118 52.5
AUR62008189 Chenopodium quinoa HOM05D005549 ORTHO05D006771 1.6e-27 126.7 111 55.9
Lj3C19G0 Lonicera japonica HOM05D005549 ORTHO05D006771 1.6e-27 126.7 108 57.4
Sed0023293 Sechium edule HOM05D005549 ORTHO05D006771 1.6e-27 126.7 107 56.1
Ah.02g110600 Amaranthus hybridus HOM05D005549 ORTHO05D006771 3.5e-27 125.6 103 58.3
Peaxi162Scf00075g00159 Petunia axillaris HOM05D005549 ORTHO05D006771 3.5e-27 125.6 115 53.9
Lalb_Chr04g0247841 Lupinus albus HOM05D005549 ORTHO05D006771 4.6e-27 125.2 100 60.0
CsaV3_1G001440 Cucumis sativus L. HOM05D005549 ORTHO05D006771 6.0e-27 124.8 104 56.7
Eucgr.H00383 Eucalyptus grandis HOM05D005549 ORTHO05D006771 6.0e-27 124.8 104 57.7
Gohir.D09G166900 Gossypium hirsutum HOM05D005549 ORTHO05D006771 6.0e-27 124.8 104 55.8
Gorai.006G188700 Gossypium raimondii HOM05D005549 ORTHO05D006771 6.0e-27 124.8 104 55.8
Sopen05g007130 Solanum pennellii HOM05D005549 ORTHO05D006771 6.0e-27 124.8 100 57.0
TWI14G0382 Tripterygium wilfordii HOM05D005549 ORTHO05D006771 6.0e-27 124.8 98 61.2
Eucgr.C01244 Eucalyptus grandis HOM05D005549 ORTHO05D006771 7.8e-27 124.4 104 56.7
Medtr5g096040 Medicago truncatula HOM05D005549 ORTHO05D006771 7.8e-27 124.4 106 59.4
Gohir.A09G171200 Gossypium hirsutum HOM05D005549 ORTHO05D006771 1.7e-26 123.2 100 55.0
Haze_07531 Corylus avellana HOM05D005549 ORTHO05D006771 2.3e-26 122.9 100 56.0
ECA232G3151 Erigeron canadensis HOM05D005549 ORTHO05D006771 2.3e-26 122.9 102 57.8
PGR031G3229 Punica granatum HOM05D005549 ORTHO05D006771 2.3e-26 122.9 109 54.1
RcHm_v2.0_Chr7g0193241 Rosa chinensis HOM05D005549 ORTHO05D006771 2.3e-26 122.9 103 59.2
Oeu024700.1 Olea europaea HOM05D005549 ORTHO05D006771 5.1e-26 121.7 111 55.0
Sopen05g007150 Solanum pennellii HOM05D005549 ORTHO05D006771 5.1e-26 121.7 100 57.0
QL10p009538 Quercus lobata HOM05D005549 ORTHO05D006771 1.1e-25 120.6 108 55.6
Rhsim12G0166100 Rhododendron simsii HOM05D005549 ORTHO05D006771 1.9e-25 119.8 103 55.3
TPR.G8611 Trifolium pratense HOM05D005549 ORTHO05D006771 1.9e-25 119.8 103 58.3
MSTRG.26261 Avicennia marina HOM05D005549 ORTHO05D006771 5.6e-25 118.2 106 51.9
Gorai.001G151900 Gossypium raimondii HOM05D005549 ORTHO05D006771 1.2e-24 117.1 100 52.0
Psat2g007040 Pisum sativum HOM05D005549 ORTHO05D006771 1.2e-24 117.1 96 57.3
Phvul.011G182000 Phaseolus vulgaris HOM05D005549 ORTHO05D006771 2.1e-24 116.3 100 55.0
Phvul.011G182066 Phaseolus vulgaris HOM05D005549 ORTHO05D006771 2.1e-24 116.3 100 55.0
PSO478G4565 Papaver somniferum HOM05D005549 ORTHO05D006771 2.8e-24 115.9 107 55.1
VMungo1127G1558 Vigna mungo HOM05D005549 ORTHO05D006771 2.8e-24 115.9 106 53.8
Migut.K00304 Erythranthe guttata HOM05D005549 ORTHO05D006771 3.6e-24 115.5 107 54.2
SGA_v2.0_scaffold293G47425 Striga asiatica HOM05D005549 ORTHO05D006771 8.1e-24 114.4 94 58.5
Ca_06401_v3 Cicer arietinum L. HOM05D005549 ORTHO05D006771 1.8e-23 113.2 99 53.5
CiPaw.11G024000 Carya illinoinensis HOM05D005549 ORTHO05D006771 4.0e-23 112.1 100 54.0
Peaxi162Scf00141g00210 Petunia axillaris HOM05D005549 ORTHO05D006771 4.0e-23 112.1 99 54.5
Gohir.D07G139801 Gossypium hirsutum HOM05D005549 ORTHO05D006771 5.2e-23 111.7 100 50.0
LjContig00081g0017630 Lotus japonicus HOM05D005549 ORTHO05D006771 1.2e-22 110.5 100 54.0
unitig_37.g12682 Utricularia gibba HOM05D005549 ORTHO05D006771 1.5e-22 110.2 107 53.3
SHI17110 Sapria himalayana HOM05D005549 ORTHO05D006771 2.6e-22 109.4 100 55.0
Mapoly0027s0008 Marchantia polymorpha HOM05D005549 ORTHO05D006771 2.2e-21 106.3 105 57.1
Sp2g26140 Schrenkiella parvula HOM05D005549 ORTHO05D006771 2.9e-21 105.9 99 54.5
Cpa.g.c31519.2 Carica papaya HOM05D005549 ORTHO05D006771 4.9e-21 105.1 85 57.6
Os04g0507900 Oryza sativa ssp. japonica HOM05D005549 ORTHO05D006771 4.9e-21 105.1 106 53.8
Carub.0008s2372 Capsella rubella HOM05D005549 ORTHO05D006771 6.4e-21 104.8 99 52.5
Zm00001eb426250 Zea mays HOM05D005549 ORTHO05D006771 8.4e-21 104.4 104 53.8
AT5G63010 Arabidopsis thaliana HOM05D005549 ORTHO05D006771 1.4e-20 103.6 105 49.5
Aa31LG11G650 Aethionema arabicum HOM05D005549 ORTHO05D006771 3.2e-20 102.4 98 52.0
CARHR276820 Cardamine hirsuta HOM05D005549 ORTHO05D006771 5.4e-20 101.7 98 53.1
BcaB02g09715 Brassica carinata HOM05D005549 ORTHO05D006771 7.1e-20 101.3 97 52.6
Thhalv10004522m.g Eutrema salsugineum HOM05D005549 ORTHO05D006771 1.2e-19 100.5 99 52.5
AL8G40040 Arabidopsis lyrata HOM05D005549 ORTHO05D006771 1.6e-19 100.1 99 51.5
BcaC01g02548 Brassica carinata HOM05D005549 ORTHO05D006771 6.0e-19 98.2 103 50.5
C03p63600 Brassica napus HOM05D005549 ORTHO05D006771 6.0e-19 98.2 103 50.5
BolC3t18618H Brassica oleracea HOM05D005549 ORTHO05D006771 6.0e-19 98.2 103 50.5
MD14G1177100 Malus domestica HOM05D005549 ORTHO05D006771 1.0e-18 97.4 76 56.6
A06p29790 Brassica napus HOM05D005549 ORTHO05D006771 1.3e-18 97.1 96 52.1
BraA06t25926Z Brassica rapa HOM05D005549 ORTHO05D006771 1.7e-18 96.7 96 52.1
AagrBONN_evm.TU.Sc2ySwM_228.3282 Anthoceros agrestis HOM05D005549 ORTHO05D006771 9.6e-17 90.9 99 44.4
SMO367G1205 Selaginella moellendorffii HOM05D005549 ORTHO05D006771 9.6e-17 90.9 103 51.5
Pp3c9_15370 Physcomitrium patens HOM05D005549 ORTHO05D006771 2.8e-16 89.4 93 49.5
THA.LOC104818503 Tarenaya hassleriana HOM05D005549 ORTHO05D006771 8.4e-13 77.8 83 49.4
Lj5C126T17 Lonicera japonica HOM05D005549 ORTHO05D006771 1.2e-11 73.9 96 43.8
Nitab4.5_0003499g0020 Nicotiana tabacum HOM05D005549 ORTHO05D006771 1.6e-11 73.6 99 43.4
CBR_g24288 Chara braunii HOM05D005549 ORTHO05D006771 3.6e-08 62.4 142 31.7


User provided reference genes

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