Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0807G014 Amborella trichopoda HOM05D006240 ORTHO05D007709 9.1e-66 253.4 129 100.0
MBI05_g33294_MAGBIO Magnolia biondii HOM05D006240 ORTHO05D007709 1.7e-19 99.8 100 57.0
TAR628G0625 Trochodendron aralioides HOM05D006240 ORTHO05D007709 4.1e-18 95.1 114 50.0
TWI36G0187 Tripterygium wilfordii HOM05D006240 ORTHO05D007709 1.2e-17 93.6 102 52.0
TAR376G0245 Trochodendron aralioides HOM05D006240 ORTHO05D007709 7.8e-17 90.9 101 51.5
Nn5g31000 Nelumbo nucifera HOM05D006240 ORTHO05D007709 1.0e-16 90.5 94 53.2
Aqoxy5G00997 Aquilegia oxysepala HOM05D006240 ORTHO05D007709 2.3e-16 89.4 104 48.1
QL02p015120 Quercus lobata HOM05D006240 ORTHO05D007709 2.3e-16 89.4 87 56.3
HPP92_012646 Vanilla planifolia HOM05D006240 ORTHO05D007709 3.0e-16 89.0 116 45.7
CiPaw.08G075400 Carya illinoinensis HOM05D006240 ORTHO05D007709 6.6e-16 87.8 96 50.0
Duzib041G0618 Durio zibethinus HOM05D006240 ORTHO05D007709 8.6e-16 87.4 87 55.2
Nn4g24539 Nelumbo nucifera HOM05D006240 ORTHO05D007709 8.6e-16 87.4 79 59.5
FAN06G3720 Fragaria x ananassa HOM05D006240 ORTHO05D007709 1.5e-15 86.7 106 51.9
GSVIVG01013393001 Vitis vinifera HOM05D006240 ORTHO05D007709 1.5e-15 86.7 111 47.7
Potri.005G253101 Populus trichocarpa HOM05D006240 ORTHO05D007709 1.9e-15 86.3 106 49.1
Sabra05G0196300 Salix brachista HOM05D006240 ORTHO05D007709 1.9e-15 86.3 106 49.1
Gohir.A01G103700 Gossypium hirsutum HOM05D006240 ORTHO05D007709 2.5e-15 85.9 87 54.0
Gohir.D01G089000 Gossypium hirsutum HOM05D006240 ORTHO05D007709 2.5e-15 85.9 87 54.0
Gorai.002G114700 Gossypium raimondii HOM05D006240 ORTHO05D007709 2.5e-15 85.9 87 54.0
PGR031G1135 Punica granatum HOM05D006240 ORTHO05D007709 2.5e-15 85.9 114 47.4
Haze_22830 Corylus avellana HOM05D006240 ORTHO05D007709 4.3e-15 85.1 91 52.7
PSO210G3458 Papaver somniferum HOM05D006240 ORTHO05D007709 4.3e-15 85.1 107 48.6
THA.LOC104811476 Tarenaya hassleriana HOM05D006240 ORTHO05D007709 5.6e-15 84.7 102 49.0
AL1G33760 Arabidopsis lyrata HOM05D006240 ORTHO05D007709 7.3e-15 84.3 97 48.5
AUR62035138 Chenopodium quinoa HOM05D006240 ORTHO05D007709 9.5e-15 84.0 108 44.4
Ca_15403_v3 Cicer arietinum L. HOM05D006240 ORTHO05D007709 9.5e-15 84.0 109 45.0
Ca_29886_v3 Cicer arietinum L. HOM05D006240 ORTHO05D007709 9.5e-15 84.0 109 45.0
Dinv31964 Davidia involucrata HOM05D006240 ORTHO05D007709 9.5e-15 84.0 87 51.7
FvH4_7g11300 Fragaria vesca HOM05D006240 ORTHO05D007709 9.5e-15 84.0 106 50.9
FAN01G0923 Fragaria x ananassa HOM05D006240 ORTHO05D007709 9.5e-15 84.0 106 50.9
FAN03G2060 Fragaria x ananassa HOM05D006240 ORTHO05D007709 9.5e-15 84.0 106 50.9
Thecc.08G062400 Theobroma cacao HOM05D006240 ORTHO05D007709 1.2e-14 83.6 87 54.0
Manes.13G069200 Manihot esculenta HOM05D006240 ORTHO05D007709 1.6e-14 83.2 102 47.1
AT1G20770 Arabidopsis thaliana HOM05D006240 ORTHO05D007709 2.1e-14 82.8 97 47.4
Cc04_g09300 Coffea canephora HOM05D006240 ORTHO05D007709 2.1e-14 82.8 96 50.0
Ciclev10002499m.g Citrus clementina HOM05D006240 ORTHO05D007709 2.8e-14 82.4 102 50.0
Medtr3g115650 Medicago truncatula HOM05D006240 ORTHO05D007709 2.8e-14 82.4 111 43.2
Sp1g18470 Schrenkiella parvula HOM05D006240 ORTHO05D007709 3.6e-14 82.0 107 45.8
unitig_578.g16237 Utricularia gibba HOM05D006240 ORTHO05D007709 3.6e-14 82.0 117 44.4
Psat5g009800 Pisum sativum HOM05D006240 ORTHO05D007709 4.7e-14 81.6 109 45.9
RcHm_v2.0_Chr7g0215611 Rosa chinensis HOM05D006240 ORTHO05D007709 4.7e-14 81.6 88 53.4
Ah.00g001020 Amaranthus hybridus HOM05D006240 ORTHO05D007709 6.2e-14 81.3 106 42.5
COL.COLO4_07215 Corchorus olitorius HOM05D006240 ORTHO05D007709 6.2e-14 81.3 95 48.4
Hma1.2p1_0612F.1_g188890 Hydrangea macrophylla HOM05D006240 ORTHO05D007709 6.2e-14 81.3 92 54.3
EL10Ac4g09545 Beta vulgaris HOM05D006240 ORTHO05D007709 8.0e-14 80.9 99 47.5
BolC7t42820H Brassica oleracea HOM05D006240 ORTHO05D007709 8.0e-14 80.9 88 51.1
AUR62042908 Chenopodium quinoa HOM05D006240 ORTHO05D007709 8.0e-14 80.9 108 43.5
RcHm_v2.0_Chr1g0349471 Rosa chinensis HOM05D006240 ORTHO05D007709 8.0e-14 80.9 88 53.4
SGA_v2.0_scaffold54G19646 Striga asiatica HOM05D006240 ORTHO05D007709 8.0e-14 80.9 99 46.5
BcaB03g14301 Brassica carinata HOM05D006240 ORTHO05D007709 1.1e-13 80.5 108 47.2
BcaC06g34834 Brassica carinata HOM05D006240 ORTHO05D007709 1.1e-13 80.5 88 51.1
C07p22820 Brassica napus HOM05D006240 ORTHO05D007709 1.1e-13 80.5 88 51.1
FAN10G2738 Fragaria x ananassa HOM05D006240 ORTHO05D007709 1.4e-13 80.1 104 49.0
Prupe.2G140800 Prunus persica HOM05D006240 ORTHO05D007709 1.4e-13 80.1 88 54.5
SalBow6G2548 Salvia bowleyana HOM05D006240 ORTHO05D007709 1.4e-13 80.1 102 47.1
MSTRG.24503 Avicennia marina HOM05D006240 ORTHO05D007709 1.8e-13 79.7 99 49.5
A07p15490 Brassica napus HOM05D006240 ORTHO05D007709 1.8e-13 79.7 88 51.1
Zm00001eb077760 Zea mays HOM05D006240 ORTHO05D007709 1.8e-13 79.7 102 44.1
CARHR021210 Cardamine hirsuta HOM05D006240 ORTHO05D007709 2.3e-13 79.3 97 46.4
BraA07t29290Z Brassica rapa HOM05D006240 ORTHO05D007709 3.1e-13 79.0 88 51.1
Migut.M00585 Erythranthe guttata HOM05D006240 ORTHO05D007709 3.1e-13 79.0 110 43.6
MD07G1117600 Malus domestica HOM05D006240 ORTHO05D007709 3.1e-13 79.0 82 57.3
Os04g0509200 Oryza sativa ssp. japonica HOM05D006240 ORTHO05D007709 3.1e-13 79.0 85 50.6
TPR.G38126 Trifolium pratense HOM05D006240 ORTHO05D007709 3.1e-13 79.0 101 45.5
Aa31LG7G4930 Aethionema arabicum HOM05D006240 ORTHO05D007709 4.0e-13 78.6 111 44.1
BcaB03g12855 Brassica carinata HOM05D006240 ORTHO05D007709 4.0e-13 78.6 88 51.1
BcaC07g39051 Brassica carinata HOM05D006240 ORTHO05D007709 4.0e-13 78.6 86 50.0
CSS0005151 Camellia sinensis var. sinensis HOM05D006240 ORTHO05D007709 5.2e-13 78.2 106 45.3
Lsat_1_v5_gn_2_1920 Lactuca sativa HOM05D006240 ORTHO05D007709 5.2e-13 78.2 103 45.6
Peaxi162Scf00129g00239 Petunia axillaris HOM05D006240 ORTHO05D007709 5.2e-13 78.2 111 43.2
Atru.chr9.2231 Acer truncatum HOM05D006240 ORTHO05D007709 6.8e-13 77.8 109 41.3
CDE04G0018 Ceratophyllum demersum HOM05D006240 ORTHO05D007709 6.8e-13 77.8 114 43.0
Carub.0001s2022 Capsella rubella HOM05D006240 ORTHO05D007709 8.9e-13 77.4 87 49.4
CAN.G206.149 Capsicum annuum HOM05D006240 ORTHO05D007709 8.9e-13 77.4 107 42.1
ClCG11G018840 Citrullus lanatus HOM05D006240 ORTHO05D007709 1.2e-12 77.0 71 54.9
CsaV3_4G037430 Cucumis sativus L. HOM05D006240 ORTHO05D007709 1.2e-12 77.0 92 51.1
Nitab4.5_0000564g0070 Nicotiana tabacum HOM05D006240 ORTHO05D007709 1.2e-12 77.0 107 43.0
Thhalv10008759m.g Eutrema salsugineum HOM05D006240 ORTHO05D007709 1.5e-12 76.6 86 48.8
Nitab4.5_0006318g0100 Nicotiana tabacum HOM05D006240 ORTHO05D007709 1.5e-12 76.6 107 43.0
CANSAT56G3734 Cannabis sativa HOM05D006240 ORTHO05D007709 2.6e-12 75.9 98 45.9
MD02G1098700 Malus domestica HOM05D006240 ORTHO05D007709 2.6e-12 75.9 82 56.1
PGSC0003DMG400001324 Solanum tuberosum HOM05D006240 ORTHO05D007709 2.6e-12 75.9 115 39.1
MELO3C017040.2 Cucumis melo HOM05D006240 ORTHO05D007709 3.4e-12 75.5 92 48.9
FAN10G3076 Fragaria x ananassa HOM05D006240 ORTHO05D007709 4.4e-12 75.1 89 51.7
Lj4C7G6 Lonicera japonica HOM05D006240 ORTHO05D007709 4.4e-12 75.1 71 53.5
VMungo1383G1920 Vigna mungo HOM05D006240 ORTHO05D007709 4.4e-12 75.1 103 45.6
Glyma.03G148200 Glycine max HOM05D006240 ORTHO05D007709 5.8e-12 74.7 83 50.6
Glyma.19G151500 Glycine max HOM05D006240 ORTHO05D007709 7.5e-12 74.3 83 50.6
Sed0018366 Sechium edule HOM05D006240 ORTHO05D007709 7.5e-12 74.3 91 48.4
Actinidia17059 Actinidia chinensis HOM05D006240 ORTHO05D007709 9.8e-12 73.9 89 51.7
C08p20350 Brassica napus HOM05D006240 ORTHO05D007709 9.8e-12 73.9 86 48.8
Actinidia15507 Actinidia chinensis HOM05D006240 ORTHO05D007709 1.3e-11 73.6 98 48.0
Phvul.001G146200 Phaseolus vulgaris HOM05D006240 ORTHO05D007709 1.3e-11 73.6 102 44.1
Migut.N02969 Erythranthe guttata HOM05D006240 ORTHO05D007709 1.7e-11 73.2 110 40.9
Sopen02g032680 Solanum pennellii HOM05D006240 ORTHO05D007709 1.7e-11 73.2 91 45.1
Solyc02g087940.4 Solanum lycopersicum HOM05D006240 ORTHO05D007709 2.2e-11 72.8 91 45.1
Migut.M00223 Erythranthe guttata HOM05D006240 ORTHO05D007709 2.9e-11 72.4 110 40.9
Lj1g0026125 Lotus japonicus HOM05D006240 ORTHO05D007709 2.9e-11 72.4 99 47.5
Phvul.009G075200 Phaseolus vulgaris HOM05D006240 ORTHO05D007709 2.9e-11 72.4 121 38.8
vmacro21788 Vaccinium macrocarpon HOM05D006240 ORTHO05D007709 3.7e-11 72.0 101 46.5
BraA08t34862Z Brassica rapa HOM05D006240 ORTHO05D007709 6.4e-11 71.2 79 48.1
BolC8t49663H Brassica oleracea HOM05D006240 ORTHO05D007709 1.1e-10 70.5 89 46.1
DCAR_020858 Daucus carota HOM05D001217 ORTHO05D007709 1.1e-10 70.5 84 46.4
Lalb_Chr11g0061501 Lupinus albus HOM05D006240 ORTHO05D007709 1.9e-10 69.7 102 40.2
A08p29270 Brassica napus HOM05D006240 ORTHO05D007709 2.4e-10 69.3 70 50.0
arahy.Tifrunner.gnm1.ann1.W2HKS7 Arachis hypogaea HOM05D006240 ORTHO05D007709 4.1e-10 68.6 73 46.6
HanXRQChr16g0516421 Helianthus annuus HOM05D006240 ORTHO05D007709 4.1e-10 68.6 97 46.4
Hund05091 Selenicereus undatus HOM05D006240 ORTHO05D007709 4.1e-10 68.6 61 57.4
Rhsim06G0005200 Rhododendron simsii HOM05D006240 ORTHO05D007709 7.0e-10 67.8 93 46.2
arahy.Tifrunner.gnm1.ann1.MR2FC0 Arachis hypogaea HOM05D006240 ORTHO05D007709 9.2e-10 67.4 75 44.0
ECA232G5059 Erigeron canadensis HOM05D006240 ORTHO05D007709 9.2e-10 67.4 103 40.8
PSO170G2591 Papaver somniferum HOM05D006240 ORTHO05D007709 9.2e-10 67.4 64 56.2
Pp3c17_23460 Physcomitrium patens HOM05D006240 ORTHO05D007709 1.7e-08 63.2 74 41.9


User provided reference genes

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