Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0807G007 Amborella trichopoda HOM05D006811 ORTHO05D008419 8.3e-227 790.0 401 100.0
TAR622G1242 Trochodendron aralioides HOM05D006811 ORTHO05D008419 7.2e-146 521.2 370 68.4
Aqoxy3G04154 Aquilegia oxysepala HOM05D006811 ORTHO05D008419 1.5e-143 513.5 371 64.4
Nn4g24731 Nelumbo nucifera HOM05D006811 ORTHO05D008419 1.2e-140 503.8 370 65.1
Rhsim10G0185300 Rhododendron simsii HOM05D006811 ORTHO05D008419 4.5e-140 501.9 377 63.1
Dinv28246 Davidia involucrata HOM05D006811 ORTHO05D008419 1.0e-139 500.7 372 65.1
GSVIVG01035212001 Vitis vinifera HOM05D006811 ORTHO05D008419 3.3e-138 495.7 372 64.8
Actinidia40414 Actinidia chinensis HOM05D006811 ORTHO05D008419 1.8e-136 490.0 371 61.7
PSO063G4300 Papaver somniferum HOM05D006811 ORTHO05D008419 2.0e-135 486.5 376 62.0
CSS0033706 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 5.7e-135 485.0 372 64.5
Cc07_g12750 Coffea canephora HOM05D006811 ORTHO05D008419 5.7e-135 485.0 372 60.5
CsaV3_4G000630 Cucumis sativus L. HOM05D006811 ORTHO05D008419 7.5e-135 484.6 370 62.4
Hma1.2p1_0158F.1_g069620 Hydrangea macrophylla HOM05D006811 ORTHO05D008419 7.5e-135 484.6 373 63.3
ClCG10G010680 Citrullus lanatus HOM05D006811 ORTHO05D008419 3.7e-134 482.3 370 62.7
Cfa007746 Carpinus fangiana HOM05D006811 ORTHO05D008419 4.9e-134 481.9 371 62.3
MD17G1286700 Malus domestica HOM05D006811 ORTHO05D008419 1.6e-132 476.9 370 62.4
Medtr3g064600 Medicago truncatula HOM05D006811 ORTHO05D008419 2.0e-132 476.5 369 63.4
DCAR_020444 Daucus carota HOM05D006811 ORTHO05D008419 5.9e-132 474.9 371 63.1
Lj6g0026577 Lotus japonicus HOM05D006811 ORTHO05D008419 5.9e-132 474.9 372 62.6
Thecc.04G060000 Theobroma cacao HOM05D006811 ORTHO05D008419 1.0e-131 474.2 370 61.9
Ca_17071_v3 Cicer arietinum L. HOM05D006811 ORTHO05D008419 1.7e-131 473.4 369 61.8
Peaxi162Scf00713g00019 Petunia axillaris HOM05D006811 ORTHO05D008419 1.7e-131 473.4 371 62.5
arahy.Tifrunner.gnm1.ann1.A3RENN Arachis hypogaea HOM05D006811 ORTHO05D008419 3.9e-131 472.2 367 62.1
VMungo0540G2025 Vigna mungo HOM05D006811 ORTHO05D008419 8.6e-131 471.1 366 61.7
Gorai.008G054100 Gossypium raimondii HOM05D006811 ORTHO05D008419 1.5e-130 470.3 371 60.4
Lalb_Chr15g0085211 Lupinus albus HOM05D006811 ORTHO05D008419 2.5e-130 469.5 368 61.7
PGSC0003DMG400016719 Solanum tuberosum HOM05D006811 ORTHO05D008419 2.5e-130 469.5 371 60.9
Glyma.11G212500 Glycine max HOM05D006811 ORTHO05D008419 4.3e-130 468.8 370 61.9
FAN23G2849 Fragaria x ananassa HOM05D006811 ORTHO05D008419 5.6e-130 468.4 392 58.4
CiPaw.03G075800 Carya illinoinensis HOM05D006811 ORTHO05D008419 7.3e-130 468.0 370 60.5
Migut.K00747 Erythranthe guttata HOM05D006811 ORTHO05D008419 9.5e-130 467.6 371 59.8
CANSAT54G1721 Cannabis sativa HOM05D006811 ORTHO05D008419 1.6e-129 466.8 370 60.8
Potri.017G139400 Populus trichocarpa HOM05D006811 ORTHO05D008419 1.6e-129 466.8 370 60.8
TPR.G26689 Trifolium pratense HOM05D006811 ORTHO05D008419 4.7e-129 465.3 369 61.0
FvH4_1g27290 Fragaria vesca HOM05D006811 ORTHO05D008419 8.0e-129 464.5 377 59.7
MSTRG.15636 Avicennia marina HOM05D006811 ORTHO05D008419 1.0e-128 464.2 371 58.5
Sabra17G0117500 Salix brachista HOM05D006811 ORTHO05D008419 1.4e-128 463.8 371 60.9
Nitab4.5_0000483g0290 Nicotiana tabacum HOM05D006811 ORTHO05D008419 1.8e-128 463.4 371 60.9
Glyma.18G043800 Glycine max HOM05D006811 ORTHO05D008419 2.3e-128 463.0 370 61.9
Gohir.A12G052300 Gossypium hirsutum HOM05D006811 ORTHO05D008419 2.3e-128 463.0 371 59.6
RcHm_v2.0_Chr3g0488721 Rosa chinensis HOM05D006811 ORTHO05D008419 5.2e-128 461.8 372 60.8
Sopen02g025910 Solanum pennellii HOM05D006811 ORTHO05D008419 8.9e-128 461.1 371 60.4
Eucgr.F02911 Eucalyptus grandis HOM05D006811 ORTHO05D008419 2.0e-127 459.9 372 59.1
Hund22201 Selenicereus undatus HOM05D006811 ORTHO05D008419 2.0e-127 459.9 374 58.8
Lsat_1_v5_gn_2_71780 Lactuca sativa HOM05D006811 ORTHO05D008419 4.4e-127 458.8 373 58.4
SalBow5G0387 Salvia bowleyana HOM05D006811 ORTHO05D008419 2.9e-126 456.1 371 59.0
AL2G23270 Arabidopsis lyrata HOM05D006811 ORTHO05D008419 8.3e-126 454.5 375 58.7
Psat5g142440 Pisum sativum HOM05D006811 ORTHO05D008419 8.3e-126 454.5 393 58.5
SalBow5G5201 Salvia bowleyana HOM05D006811 ORTHO05D008419 1.9e-125 453.4 371 58.5
AT1G65900 Arabidopsis thaliana HOM05D006811 ORTHO05D008419 7.0e-125 451.4 374 58.8
CDE05G3344 Ceratophyllum demersum HOM05D006811 ORTHO05D008419 2.0e-124 449.9 372 58.9
PGR004G2199 Punica granatum HOM05D006811 ORTHO05D008419 2.7e-124 449.5 371 62.0
EL10Ac4g08932 Beta vulgaris HOM05D006811 ORTHO05D008419 6.0e-124 448.4 371 58.2
Carub.0002s1184 Capsella rubella HOM05D006811 ORTHO05D008419 1.3e-123 447.2 375 56.8
Sp5g20950 Schrenkiella parvula HOM05D006811 ORTHO05D008419 1.9e-122 443.4 376 57.4
Sc06g0003070 Simmondsia chinensis HOM05D006811 ORTHO05D008419 9.5e-122 441.0 373 58.7
CARHR057790 Cardamine hirsuta HOM05D006811 ORTHO05D008419 1.6e-121 440.3 375 56.8
Thhalv10018647m.g Eutrema salsugineum HOM05D006811 ORTHO05D008419 3.6e-121 439.1 374 57.8
Aa31LG2G2700 Aethionema arabicum HOM05D006811 ORTHO05D008419 4.7e-121 438.7 372 55.6
Nitab4.5_0008137g0060 Nicotiana tabacum HOM05D006811 ORTHO05D008419 6.2e-121 438.3 405 54.6
HanXRQChr14g0443391 Helianthus annuus HOM05D006811 ORTHO05D008419 2.2e-118 429.9 372 55.1
BcaB03g15309 Brassica carinata HOM05D006811 ORTHO05D008419 1.3e-115 420.6 372 56.2
THA.LOC104825578 Tarenaya hassleriana HOM05D006811 ORTHO05D008419 2.3e-115 419.9 350 57.1
Ciclev10013413m.g Citrus clementina HOM05D006811 ORTHO05D008419 5.1e-115 418.7 369 56.9
QL02p064229 Quercus lobata HOM05D006811 ORTHO05D008419 7.3e-114 414.8 420 52.4
C06p39240 Brassica napus HOM05D006811 ORTHO05D008419 2.3e-112 409.8 373 55.2
unitig_0.g2638 Utricularia gibba HOM05D006811 ORTHO05D008419 3.1e-112 409.5 370 53.2
HanXRQChr12g0365711 Helianthus annuus HOM05D006811 ORTHO05D008419 5.2e-112 408.7 381 52.8
TWI53G0648 Tripterygium wilfordii HOM05D006811 ORTHO05D008419 6.8e-112 408.3 335 58.5
A07p33010 Brassica napus HOM05D006811 ORTHO05D008419 1.2e-111 407.5 373 55.0
BraA07t30929Z Brassica rapa HOM05D006811 ORTHO05D008419 1.2e-111 407.5 373 55.0
BcaC08g46096 Brassica carinata HOM05D006811 ORTHO05D008419 2.6e-111 406.4 373 54.7
Duzib138G1484 Durio zibethinus HOM05D006811 ORTHO05D008419 3.4e-111 406.0 375 54.9
FAN26G0959 Fragaria x ananassa HOM05D006811 ORTHO05D008419 7.6e-111 404.8 377 53.6
AUR62003402 Chenopodium quinoa HOM05D006811 ORTHO05D008419 4.9e-110 402.1 398 51.8
vmacro20465 Vaccinium macrocarpon HOM05D006811 ORTHO05D008419 1.1e-109 401.0 343 60.3
AUR62004775 Chenopodium quinoa HOM05D006811 ORTHO05D008419 4.1e-109 399.1 374 52.9
Lj4A251G58 Lonicera japonica HOM05D006811 ORTHO05D008419 2.1e-108 396.7 408 50.2
BolC6t39018H Brassica oleracea HOM05D006811 ORTHO05D008419 7.8e-108 394.8 410 50.0
Manes.02G081300 Manihot esculenta HOM05D006811 ORTHO05D008419 2.1e-105 386.7 313 59.7
Sed0027023 Sechium edule HOM05D006811 ORTHO05D008419 3.4e-103 379.4 306 58.5
FAN28G2567 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.4e-101 374.0 297 59.6
Atru.chr1.2130 Acer truncatum HOM05D006811 ORTHO05D008419 3.2e-101 372.9 288 59.4
HPP92_014601 Vanilla planifolia HOM05D006811 ORTHO05D008419 1.6e-100 370.5 315 56.5
Phvul.006G087200 Phaseolus vulgaris HOM05D006811 ORTHO05D008419 3.6e-97 359.4 311 56.3
ECA238G0794 Erigeron canadensis HOM05D006811 ORTHO05D008419 5.3e-96 355.5 372 47.3
SGA_v2.0_scaffold115G32048 Striga asiatica HOM05D006811 ORTHO05D008419 9.0e-96 354.8 286 57.3
Zm00001eb001500 Zea mays HOM05D006811 ORTHO05D008419 2.5e-77 293.5 249 57.4
Ah.06g191630 Amaranthus hybridus HOM05D006811 ORTHO05D008419 2.3e-75 287.0 382 43.2
Prupe.3G014300 Prunus persica HOM05D006811 ORTHO05D008419 2.1e-73 280.4 231 58.0
MELO3C017973.2 Cucumis melo HOM05D006811 ORTHO05D008419 5.0e-70 269.2 219 60.7
Haze_14327 Corylus avellana HOM05D006811 ORTHO05D008419 6.5e-70 268.9 252 54.4
AagrBONN_evm.TU.Sc2ySwM_368.3231 Anthoceros agrestis HOM05D006811 ORTHO05D008419 6.7e-67 258.8 377 39.0
Gohir.D12G050800 Gossypium hirsutum HOM05D006811 ORTHO05D008419 6.7e-67 258.8 215 59.1
PSO782G1785 Papaver somniferum HOM05D006811 ORTHO05D008419 3.7e-65 253.1 218 58.3
DCAR_017976 Daucus carota HOM05D006811 ORTHO05D008419 1.1e-64 251.5 213 57.7
Cpa.g.sc178.33 Carica papaya HOM05D006811 ORTHO05D008419 1.9e-61 240.7 251 50.2
CSS0020523 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 1.1e-53 214.9 156 64.7
CBR_g31433 Chara braunii HOM05D006811 ORTHO05D008419 2.3e-51 207.2 394 34.3
arahy.Tifrunner.gnm1.ann1.JYBV0C Arachis hypogaea HOM05D006811 ORTHO05D008419 4.2e-45 186.4 146 64.4
HPP92_014605 Vanilla planifolia HOM05D006811 ORTHO05D008419 4.2e-37 159.8 153 54.2
FAN19G2462 Fragaria x ananassa HOM05D006811 ORTHO05D008419 5.2e-35 152.9 141 54.6
CSS0043986 Camellia sinensis var. sinensis HOM05D006811 ORTHO05D008419 2.2e-33 147.5 145 55.2
Cre02.g081050 Chlamydomonas reinhardtii HOM05D006811 ORTHO05D008419 8.0e-28 129.0 360 28.9
FAN28G1678 Fragaria x ananassa HOM05D006811 ORTHO05D008419 1.2e-23 115.2 82 65.9
MCO05G199 Micromonas commoda HOM05D006811 ORTHO05D008419 2.9e-22 110.5 394 27.2
Os03g0120000 Oryza sativa ssp. japonica HOM05D006811 ORTHO05D008419 1.5e-21 108.2 73 68.5
Medtr3g073800 Medicago truncatula HOM05D006811 ORTHO05D008419 3.3e-21 107.1 69 73.9
PRCOL_00005605 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 3.4e-18 97.1 346 25.7
FAN28G2576 Fragaria x ananassa HOM05D006811 ORTHO05D008419 3.5e-15 87.0 74 54.1
PRCOL_00004838 Prasinoderma coloniale HOM05D006811 ORTHO05D008419 3.5e-15 87.0 375 23.2
SEGI_18554 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 5.0e-14 83.2 91 44.0
Aa31LG2G2690 Aethionema arabicum HOM05D000356 ORTHO05D000265 1.9e-13 81.3 81 48.1
SEGI_23786 Sequoiadendron giganteum HOM05D006811 ORTHO05D008419 7.5e-10 69.3 112 33.0
COL.COLO4_03698 Corchorus olitorius HOM05D006811 ORTHO05D008419 1.3e-09 68.6 69 50.7
A02p12460 Brassica napus HOM05D006811 ORTHO05D008419 1.9e-08 64.7 74 40.5
arahy.Tifrunner.gnm1.ann1.XFK461 Arachis hypogaea HOM05D006811 ORTHO05D008419 8.6e-06 55.8 33 78.8


User provided reference genes

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