Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0800G098 Amborella trichopoda HOM05D005191 ORTHO05D006725 0.0e+00 1306.2 657 100.0
TAR625G1134 Trochodendron aralioides HOM05D005191 ORTHO05D006725 2.2e-277 958.7 661 72.2
Nn2g12129 Nelumbo nucifera HOM05D005191 ORTHO05D006725 4.1e-271 937.9 661 70.7
Aqoxy7G02403 Aquilegia oxysepala HOM05D005191 ORTHO05D006725 1.3e-269 932.9 661 69.4
PSO170G6846 Papaver somniferum HOM05D005191 ORTHO05D006725 1.3e-264 916.4 661 68.2
PSO017G2350 Papaver somniferum HOM05D005191 ORTHO05D006725 1.1e-263 913.3 661 67.8
QL02p090053 Quercus lobata HOM05D005191 ORTHO05D006725 2.5e-252 875.5 660 66.5
CiPaw.03G249200 Carya illinoinensis HOM05D005191 ORTHO05D006725 1.6e-251 872.8 661 66.3
Cfa002299 Carpinus fangiana HOM05D005191 ORTHO05D006725 6.7e-250 867.5 661 66.7
CSS0021683 Camellia sinensis var. sinensis HOM05D005191 ORTHO05D006725 7.5e-249 864.0 681 64.8
Prupe.7G249300 Prunus persica HOM05D005191 ORTHO05D006725 7.5e-249 864.0 659 66.6
Potri.006G065000 Populus trichocarpa HOM05D005191 ORTHO05D006725 5.3e-247 857.8 661 64.9
Thecc.09G133700 Theobroma cacao HOM05D005191 ORTHO05D006725 3.8e-245 851.7 661 65.2
Ciclev10007583m.g Citrus clementina HOM05D005191 ORTHO05D006725 6.5e-245 850.9 661 65.2
RcHm_v2.0_Chr2g0087561 Rosa chinensis HOM05D005191 ORTHO05D006725 8.5e-245 850.5 661 64.6
TWI63G0111 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 1.5e-244 849.7 661 63.8
Gorai.004G107900 Gossypium raimondii HOM05D005191 ORTHO05D006725 9.4e-244 847.0 661 64.4
CANSAT11G2540 Cannabis sativa HOM05D005191 ORTHO05D006725 2.1e-243 845.9 671 63.6
MD02G1022800 Malus domestica HOM05D005191 ORTHO05D006725 6.8e-242 840.9 661 64.8
FvH4_1g02530 Fragaria vesca HOM05D005191 ORTHO05D006725 2.0e-241 839.3 661 64.0
Gohir.A08G088900 Gossypium hirsutum HOM05D005191 ORTHO05D006725 2.6e-241 839.0 661 64.0
Rhsim03G0251800 Rhododendron simsii HOM05D005191 ORTHO05D006725 5.7e-241 837.8 685 62.3
FAN19G1407 Fragaria x ananassa HOM05D005191 ORTHO05D006725 7.5e-241 837.4 661 63.8
COL.COLO4_15579 Corchorus olitorius HOM05D005191 ORTHO05D006725 9.8e-241 837.0 660 64.2
Potri.T124807 Populus trichocarpa HOM05D005191 ORTHO05D006725 1.3e-240 836.6 661 64.3
MD15G1165500 Malus domestica HOM05D005191 ORTHO05D006725 2.8e-240 835.5 674 63.4
Potri.018G125171 Populus trichocarpa HOM05D005191 ORTHO05D006725 2.8e-240 835.5 661 64.3
Glyma.17G110600 Glycine max HOM05D005191 ORTHO05D006725 4.8e-240 834.7 661 64.4
FAN23G0864 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.1e-239 833.6 661 63.7
Lj7A435G51 Lonicera japonica HOM05D005191 ORTHO05D006725 1.4e-239 833.2 697 60.8
Glyma.13G160800 Glycine max HOM05D005191 ORTHO05D006725 2.4e-239 832.4 662 64.5
FAN26G1428 Fragaria x ananassa HOM05D005191 ORTHO05D006725 5.4e-239 831.2 661 63.2
MSTRG.26350 Avicennia marina HOM05D005191 ORTHO05D006725 7.0e-239 830.9 662 63.1
FAN28G1162 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.6e-238 829.7 656 63.6
Lalb_Chr12g0198261 Lupinus albus HOM05D005191 ORTHO05D006725 6.5e-237 824.3 661 63.4
TWI32G0152 Tripterygium wilfordii HOM05D005191 ORTHO05D006725 9.5e-236 820.5 661 62.2
Eucgr.E03534 Eucalyptus grandis HOM05D005191 ORTHO05D006725 1.0e-234 817.0 672 62.2
Cc06_g08000 Coffea canephora HOM05D005191 ORTHO05D006725 3.0e-234 815.5 663 61.5
Cc06_g08010 Coffea canephora HOM05D005191 ORTHO05D006725 3.0e-234 815.5 663 61.5
Sc18g0000280 Simmondsia chinensis HOM05D005191 ORTHO05D006725 2.0e-233 812.8 661 62.2
Sabra18G0106500 Salix brachista HOM05D005191 ORTHO05D006725 2.6e-233 812.4 661 62.9
Migut.K00420 Erythranthe guttata HOM05D005191 ORTHO05D006725 3.4e-233 812.0 663 61.2
Phvul.003G169500 Phaseolus vulgaris HOM05D005191 ORTHO05D006725 7.5e-233 810.8 661 62.5
ECA236G3625 Erigeron canadensis HOM05D005191 ORTHO05D006725 1.7e-232 809.7 662 61.3
Sed0022210 Sechium edule HOM05D005191 ORTHO05D006725 1.7e-232 809.7 661 62.6
arahy.Tifrunner.gnm1.ann1.0L2UMW Arachis hypogaea HOM05D005191 ORTHO05D006725 1.2e-230 803.5 661 62.6
Nitab4.5_0000374g0090 Nicotiana tabacum HOM05D005191 ORTHO05D006725 1.2e-230 803.5 662 61.6
arahy.Tifrunner.gnm1.ann1.W0WM15 Arachis hypogaea HOM05D005191 ORTHO05D006725 1.6e-230 803.1 661 62.5
Manes.06G046300 Manihot esculenta HOM05D005191 ORTHO05D006725 1.0e-229 800.4 661 62.0
VMungo1215G2132 Vigna mungo HOM05D005191 ORTHO05D006725 1.0e-229 800.4 661 61.9
AUR62013300 Chenopodium quinoa HOM05D005191 ORTHO05D006725 8.6e-229 797.3 666 60.2
CAN.G1663.1 Capsicum annuum HOM05D005191 ORTHO05D006725 1.1e-228 797.0 661 61.1
Sopen07g001100 Solanum pennellii HOM05D005191 ORTHO05D006725 1.1e-228 797.0 662 61.0
TPR.G7618 Trifolium pratense HOM05D005191 ORTHO05D006725 1.5e-228 796.6 660 61.7
CsaV3_1G027890 Cucumis sativus L. HOM05D005191 ORTHO05D006725 4.3e-228 795.0 661 61.9
Lsat_1_v5_gn_8_61061 Lactuca sativa HOM05D005191 ORTHO05D006725 5.2e-226 788.1 644 61.3
THA.LOC104826555 Tarenaya hassleriana HOM05D005191 ORTHO05D006725 6.8e-226 787.7 662 60.3
ClCG06G011590 Citrullus lanatus HOM05D005191 ORTHO05D006725 2.6e-225 785.8 660 61.5
Gohir.D08G100100 Gossypium hirsutum HOM05D005191 ORTHO05D006725 2.6e-225 785.8 618 63.9
Psat4g036440 Pisum sativum HOM05D005191 ORTHO05D006725 7.5e-225 784.3 661 61.0
HanXRQChr05g0143851 Helianthus annuus HOM05D005191 ORTHO05D006725 9.8e-225 783.9 662 60.0
SGA_v2.0_scaffold63G21813 Striga asiatica HOM05D005191 ORTHO05D006725 1.6e-222 776.5 663 59.7
Cpa.g.sc46.51 Carica papaya HOM05D005191 ORTHO05D006725 3.5e-222 775.4 661 59.9
Lj4g0015768 Lotus japonicus HOM05D005191 ORTHO05D006725 8.6e-221 770.8 666 59.8
Solyc07g007810.3 Solanum lycopersicum HOM05D005191 ORTHO05D006725 6.8e-218 761.1 662 59.2
Peaxi162Scf00088g01225 Petunia axillaris HOM05D005191 ORTHO05D006725 2.6e-217 759.2 662 59.1
Nitab4.5_0005159g0010 Nicotiana tabacum HOM05D005191 ORTHO05D006725 2.7e-214 749.2 615 61.5
Hund26552 Selenicereus undatus HOM05D005191 ORTHO05D006725 8.6e-213 744.2 661 58.7
EL10Ac8g18733 Beta vulgaris HOM05D005191 ORTHO05D006725 2.8e-211 739.2 773 52.5
Aa31LG8G12200 Aethionema arabicum HOM05D005191 ORTHO05D006725 1.1e-210 737.3 661 57.3
Dinv41468 Davidia involucrata HOM05D005191 ORTHO05D006725 1.3e-208 730.3 538 68.4
Duzib150G0407 Durio zibethinus HOM05D005191 ORTHO05D006725 1.3e-208 730.3 667 57.6
AUR62011184 Chenopodium quinoa HOM05D005191 ORTHO05D006725 1.1e-207 727.2 678 56.3
A06p26710 Brassica napus HOM05D005191 ORTHO05D006725 1.3e-205 720.3 662 55.7
Sp3g26260 Schrenkiella parvula HOM05D005191 ORTHO05D006725 3.6e-203 712.2 661 56.0
DCAR_009327 Daucus carota HOM05D005191 ORTHO05D006725 1.8e-202 709.9 673 56.6
PGR142G3543 Punica granatum HOM05D005191 ORTHO05D006725 4.0e-202 708.8 664 57.2
BcaC01g02222 Brassica carinata HOM05D005191 ORTHO05D006725 5.2e-202 708.4 662 55.3
C03p67700 Brassica napus HOM05D005191 ORTHO05D006725 5.2e-202 708.4 662 55.3
BcaB02g10775 Brassica carinata HOM05D005191 ORTHO05D006725 4.4e-201 705.3 662 55.3
AT2G11000 Arabidopsis thaliana HOM05D005191 ORTHO05D006725 3.8e-200 702.2 662 55.0
BolSC21t60229H Brassica oleracea HOM05D005191 ORTHO05D006725 1.1e-199 700.7 666 54.5
Carub.0003s2755 Capsella rubella HOM05D005191 ORTHO05D006725 1.9e-199 699.9 669 55.0
AL3G44790 Arabidopsis lyrata HOM05D005191 ORTHO05D006725 5.4e-199 698.4 662 55.0
Actinidia26371 Actinidia chinensis HOM05D005191 ORTHO05D006725 1.6e-190 670.2 659 54.5
BraA06t25606Z Brassica rapa HOM05D005191 ORTHO05D006725 9.6e-188 661.0 679 51.8
Medtr4g115450 Medicago truncatula HOM05D005191 ORTHO05D006725 9.6e-188 661.0 556 61.3
Thhalv10022576m.g Eutrema salsugineum HOM05D005191 ORTHO05D006725 2.1e-187 659.8 608 57.1
Atru.chr7.1956 Acer truncatum HOM05D005191 ORTHO05D006725 6.2e-187 658.3 487 66.9
SEGI_14008 Sequoiadendron giganteum HOM05D005191 ORTHO05D006725 1.5e-185 653.7 672 54.9
SalBow1G1849 Salvia bowleyana HOM05D005191 ORTHO05D006725 6.9e-178 628.2 622 52.1
GSVIVG01015604001 Vitis vinifera HOM05D005191 ORTHO05D006725 7.1e-175 618.2 474 66.0
MELO3C010304.2 Cucumis melo HOM05D005191 ORTHO05D006725 6.5e-168 595.1 684 50.0
Mapoly0005s0239 Marchantia polymorpha HOM05D005191 ORTHO05D006725 8.5e-160 568.2 686 46.2
vmacro06157 Vaccinium macrocarpon HOM05D005191 ORTHO05D006725 4.6e-158 562.4 436 67.0
Pp3c26_8550 Physcomitrium patens HOM05D005191 ORTHO05D006725 3.3e-156 556.2 693 46.2
Oeu052176.1 Olea europaea HOM05D005191 ORTHO05D006725 9.1e-154 548.1 473 58.8
HPP92_010843 Vanilla planifolia HOM05D005191 ORTHO05D006725 1.2e-153 547.7 404 66.6
AagrBONN_evm.TU.Sc2ySwM_344.2372 Anthoceros agrestis HOM05D005191 ORTHO05D006725 3.2e-151 539.7 679 45.7
Ah.14g079340 Amaranthus hybridus HOM05D005191 ORTHO05D006725 5.9e-145 518.8 406 60.6
Hund26401 Selenicereus undatus HOM05D005191 ORTHO05D006725 1.1e-135 488.0 480 54.2
CARHR104890 Cardamine hirsuta HOM05D005191 ORTHO05D006725 9.4e-135 485.0 401 61.3
Zm00001eb192130 Zea mays HOM05D005191 ORTHO05D006725 7.0e-130 468.8 364 62.6
Haze_25489 Corylus avellana HOM05D005191 ORTHO05D006725 2.9e-120 436.8 374 62.3
SMO174G0034 Selaginella moellendorffii HOM05D005191 ORTHO05D006725 5.5e-119 432.6 688 39.1
Ca_21665_v3 Cicer arietinum L. HOM05D005191 ORTHO05D006725 6.8e-117 425.6 342 63.5
Os02g0803250 Oryza sativa ssp. japonica HOM05D005191 ORTHO05D006725 8.3e-115 418.7 643 39.8
Haze_25491 Corylus avellana HOM05D005191 ORTHO05D006725 5.6e-111 406.0 381 56.4
CBR_g29413 Chara braunii HOM05D005191 ORTHO05D006725 2.1e-110 404.1 711 37.3
unitig_0.g2715 Utricularia gibba HOM05D005191 ORTHO05D006725 3.6e-110 403.3 386 56.5
Ca_06948_v3 Cicer arietinum L. HOM05D005191 ORTHO05D006725 1.1e-93 348.6 324 56.2
CDE05G1862 Ceratophyllum demersum HOM05D005191 ORTHO05D006725 2.3e-93 347.4 320 58.8
Sabra06G0047500 Salix brachista HOM05D005191 ORTHO05D006725 2.9e-91 340.5 308 56.2
Actinidia38723 Actinidia chinensis HOM05D005191 ORTHO05D006725 1.4e-90 338.2 286 61.5
GSVIVG01002648001 Vitis vinifera HOM05D005191 ORTHO05D006725 3.2e-74 283.9 190 74.2
vmacro06156 Vaccinium macrocarpon HOM05D005191 ORTHO05D006725 2.9e-59 234.2 240 50.8
Psat6g224720 Pisum sativum HOM05D005191 ORTHO05D006725 6.0e-49 199.9 144 65.3
CDE05G1976 Ceratophyllum demersum HOM05D005191 ORTHO05D006725 2.4e-45 188.0 152 59.9
FAN06G0842 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.7e-43 181.8 313 38.7
Rhsim13G0106800 Rhododendron simsii HOM05D005191 ORTHO05D006725 5.5e-42 176.8 145 62.1
unitig_0.g2716 Utricularia gibba HOM05D005191 ORTHO05D006725 1.6e-33 148.7 152 52.6
FAN06G5005 Fragaria x ananassa HOM05D005191 ORTHO05D006725 1.2e-28 132.5 264 37.5
Actinidia38722 Actinidia chinensis HOM05D005191 ORTHO05D006725 5.9e-28 130.2 159 42.8
RcHm_v2.0_Chr5g0051701 Rosa chinensis HOM05D005191 ORTHO05D006725 3.7e-22 110.9 132 51.5
MBI13_g29624_MAGBIO Magnolia biondii HOM05D005191 ORTHO05D006725 2.4e-21 108.2 73 71.2
FvH4_7g23890 Fragaria vesca HOM05D005191 ORTHO05D006725 9.1e-21 106.3 95 55.8
PRCOL_00001705 Prasinoderma coloniale HOM05D005191 ORTHO05D006725 1.3e-19 102.4 469 25.8
FAN26G2291 Fragaria x ananassa HOM05D005191 ORTHO05D006725 2.2e-19 101.7 88 56.8
Cre06.g300650 Chlamydomonas reinhardtii HOM05D005191 ORTHO05D006725 8.5e-19 99.8 502 24.9
FAN10G2766 Fragaria x ananassa HOM05D005191 ORTHO05D006725 9.4e-18 96.3 83 59.0
FAN10G4062 Fragaria x ananassa HOM05D005191 ORTHO05D006725 9.4e-18 96.3 123 48.8
FAN15G1193 Fragaria x ananassa HOM05D002169 ORTHO05D006927 3.3e-15 87.8 74 63.5
FvH4_1g29180 Fragaria vesca HOM05D005191 ORTHO05D025363 2.2e-11 75.1 51 70.6
TPR.G8947 Trifolium pratense HOM05D005191 ORTHO05D006725 6.5e-11 73.6 48 68.8
Rhsim05G0138400 Rhododendron simsii HOM05D005191 ORTHO05D006725 8.5e-11 73.2 112 42.9
Nitab4.5_0005159g0020 Nicotiana tabacum HOM05D005191 ORTHO05D006725 1.8e-08 65.5 48 68.8
Rhsim10G0150400 Rhododendron simsii HOM05D005191 ORTHO05D030537 8.8e-08 63.2 50 54.0
COL.COLO4_23752 Corchorus olitorius HOM05D005191 ORTHO05D016248 2.8e-06 58.2 58 51.7


User provided reference genes

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