Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0800G088 Amborella trichopoda HOM05D003622 ORTHO05D004453 0.0e+00 1609.0 843 100.0
TAR625G0175 Trochodendron aralioides HOM05D003622 ORTHO05D004453 1.1e-252 877.1 861 59.7
Aqoxy7G03634 Aquilegia oxysepala HOM05D003622 ORTHO05D004453 9.9e-238 827.4 866 56.7
PSO017G7291 Papaver somniferum HOM05D003622 ORTHO05D004453 3.2e-236 822.4 834 56.1
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 4.6e-235 818.5 848 55.3
PSO170G2238 Papaver somniferum HOM05D003622 ORTHO05D004453 1.5e-233 813.5 835 55.8
Dinv36478 Davidia involucrata HOM05D003622 ORTHO05D004453 1.3e-232 810.4 856 55.1
Gohir.A08G088500 Gossypium hirsutum HOM05D003622 ORTHO05D004453 1.9e-225 786.6 853 53.8
Duzib168G1318 Durio zibethinus HOM05D003622 ORTHO05D004453 2.5e-225 786.2 856 53.4
GSVIVG01015594001 Vitis vinifera HOM05D003622 ORTHO05D004453 4.3e-225 785.4 850 54.6
Cfa003424 Carpinus fangiana HOM05D003622 ORTHO05D004453 2.0e-222 776.5 833 54.4
CSS0022552 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 4.5e-222 775.4 864 52.2
Thecc.09G132400 Theobroma cacao HOM05D003622 ORTHO05D004453 2.1e-219 766.5 850 52.6
CiPaw.04G174900 Carya illinoinensis HOM05D003622 ORTHO05D004453 5.1e-218 761.9 838 53.7
CiPaw.03G248700 Carya illinoinensis HOM05D003622 ORTHO05D004453 6.7e-218 761.5 868 53.3
Gorai.013G235300 Gossypium raimondii HOM05D003622 ORTHO05D004453 1.5e-217 760.4 863 51.9
Glyma.13G160300 Glycine max HOM05D003622 ORTHO05D004453 2.5e-217 759.6 858 52.6
Glyma.17G111200 Glycine max HOM05D003622 ORTHO05D004453 3.3e-217 759.2 856 52.8
Gorai.004G107500 Gossypium raimondii HOM05D003622 ORTHO05D004453 7.4e-217 758.1 855 52.5
Manes.14G116100 Manihot esculenta HOM05D003622 ORTHO05D004453 7.4e-217 758.1 860 53.4
Lj4g0015305 Lotus japonicus HOM05D003622 ORTHO05D004453 1.3e-216 757.3 856 53.0
Potri.006G065600 Populus trichocarpa HOM05D003622 ORTHO05D004453 1.6e-216 756.9 874 52.3
COL.COLO4_35161 Corchorus olitorius HOM05D003622 ORTHO05D004453 6.3e-216 755.0 861 53.2
EL10Ac8g18721 Beta vulgaris HOM05D003622 ORTHO05D004453 1.4e-215 753.8 854 52.0
VMungo1215G2226 Vigna mungo HOM05D003622 ORTHO05D004453 1.4e-215 753.8 864 52.3
Phvul.003G169000 Phaseolus vulgaris HOM05D003622 ORTHO05D004453 2.4e-215 753.1 857 52.3
arahy.Tifrunner.gnm1.ann1.HD4WN1 Arachis hypogaea HOM05D003622 ORTHO05D004453 5.3e-215 751.9 852 53.6
Manes.06G047000 Manihot esculenta HOM05D003622 ORTHO05D004453 5.3e-215 751.9 846 53.5
Gorai.010G061100 Gossypium raimondii HOM05D003622 ORTHO05D004453 6.9e-215 751.5 851 52.6
Actinidia21950 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.2e-214 750.7 860 52.4
Ciclev10007427m.g Citrus clementina HOM05D003622 ORTHO05D004453 2.6e-214 749.6 864 52.4
Gohir.D08G099700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 3.4e-214 749.2 836 53.0
Potri.018G126100 Populus trichocarpa HOM05D003622 ORTHO05D004453 1.3e-213 747.3 831 53.8
Gohir.A06G053800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 6.5e-213 745.0 852 52.6
Lalb_Chr13g0301561 Lupinus albus HOM05D003622 ORTHO05D004453 1.4e-212 743.8 852 53.2
Hund09284 Selenicereus undatus HOM05D003622 ORTHO05D004453 2.5e-212 743.0 852 51.8
Gohir.D06G052700 Gossypium hirsutum HOM05D003622 ORTHO05D004453 9.4e-212 741.1 851 52.1
Sabra18G0107100 Salix brachista HOM05D003622 ORTHO05D004453 1.2e-211 740.7 830 52.5
Nitab4.5_0003393g0070 Nicotiana tabacum HOM05D003622 ORTHO05D004453 1.8e-210 736.9 857 50.3
Peaxi162Scf00088g01327 Petunia axillaris HOM05D003622 ORTHO05D004453 5.1e-210 735.3 856 50.7
AUR62011177 Chenopodium quinoa HOM05D003622 ORTHO05D004453 8.8e-210 734.6 858 50.8
AUR62013307 Chenopodium quinoa HOM05D003622 ORTHO05D004453 1.5e-209 733.8 858 50.8
arahy.Tifrunner.gnm1.ann1.DJE2D0 Arachis hypogaea HOM05D003622 ORTHO05D004453 1.3e-208 730.7 892 51.2
Sc08g0006260 Simmondsia chinensis HOM05D003622 ORTHO05D004453 2.2e-208 729.9 859 50.5
Nitab4.5_0002008g0030 Nicotiana tabacum HOM05D003622 ORTHO05D004453 2.8e-208 729.6 857 50.3
Gohir.A13G200800 Gossypium hirsutum HOM05D003622 ORTHO05D004453 4.8e-208 728.8 862 50.1
QL02p089888 Quercus lobata HOM05D003622 ORTHO05D004453 6.9e-207 724.9 983 47.1
Hund26549 Selenicereus undatus HOM05D003622 ORTHO05D004453 6.9e-207 724.9 855 50.3
Nn2g12120 Nelumbo nucifera HOM05D003622 ORTHO05D004453 1.0e-205 721.1 677 62.3
Lalb_Chr07g0179261 Lupinus albus HOM05D003622 ORTHO05D004453 1.3e-205 720.7 849 51.2
Sopen07g003790 Solanum pennellii HOM05D003622 ORTHO05D004453 1.3e-205 720.7 836 50.0
CsaV3_1G026740 Cucumis sativus L. HOM05D003622 ORTHO05D004453 2.9e-205 719.5 852 50.6
TWI34G1661 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 2.9e-205 719.5 858 50.5
PGSC0003DMG400030907 Solanum tuberosum HOM05D003622 ORTHO05D004453 3.8e-205 719.2 838 50.0
Solyc07g007890.3 Solanum lycopersicum HOM05D003622 ORTHO05D004453 8.5e-205 718.0 837 49.8
Lalb_Chr12g0198231 Lupinus albus HOM05D003622 ORTHO05D004453 1.1e-204 717.6 862 51.7
Medtr4g115350 Medicago truncatula HOM05D003622 ORTHO05D004453 1.9e-204 716.8 856 50.5
TWI63G1810 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 7.2e-204 714.9 858 49.8
TWI32G0590 Tripterygium wilfordii HOM05D003622 ORTHO05D004453 1.2e-203 714.1 849 50.8
Eucgr.C01387 Eucalyptus grandis HOM05D003622 ORTHO05D004453 1.6e-203 713.8 830 51.1
MELO3C010313.2 Cucumis melo HOM05D003622 ORTHO05D004453 4.7e-203 712.2 855 50.5
Sed0001481 Sechium edule HOM05D003622 ORTHO05D004453 3.3e-201 706.1 859 50.3
CDE03G0113 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 1.3e-200 704.1 828 52.9
CANSAT11G0379 Cannabis sativa HOM05D003622 ORTHO05D004453 8.2e-200 701.4 862 50.3
CAN.G1266.4 Capsicum annuum HOM05D003622 ORTHO05D004453 3.4e-198 696.0 837 48.9
SalBow1G3694 Salvia bowleyana HOM05D003622 ORTHO05D004453 6.5e-197 691.8 859 49.0
Lalb_Chr11g0072261 Lupinus albus HOM05D003622 ORTHO05D004453 1.1e-196 691.0 888 49.0
FAN23G2517 Fragaria x ananassa HOM05D003622 ORTHO05D004453 3.9e-194 682.6 842 48.8
Sabra06G0047800 Salix brachista HOM05D003622 ORTHO05D004453 3.9e-194 682.6 985 45.2
Psat0s188g0040 Pisum sativum HOM05D003622 ORTHO05D004453 1.1e-193 681.0 864 49.4
CDE06G0586 Ceratophyllum demersum HOM05D003622 ORTHO05D004453 1.5e-193 680.6 835 51.7
Cc06_g08050 Coffea canephora HOM05D003622 ORTHO05D004453 4.4e-193 679.1 854 49.8
FAN19G0217 Fragaria x ananassa HOM05D003622 ORTHO05D004453 5.7e-193 678.7 842 49.0
FvH4_1g02580 Fragaria vesca HOM05D003622 ORTHO05D004453 9.7e-193 677.9 842 48.9
Atru.chr7.1951 Acer truncatum HOM05D003622 ORTHO05D004453 1.3e-192 677.6 717 55.5
PGR102G2297 Punica granatum HOM05D003622 ORTHO05D004453 2.8e-192 676.4 862 48.5
Prupe.7G248800 Prunus persica HOM05D003622 ORTHO05D004453 6.3e-192 675.2 847 48.6
FAN28G0611 Fragaria x ananassa HOM05D003622 ORTHO05D004453 1.1e-191 674.5 843 48.9
vmacro07722 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 1.4e-191 674.1 789 51.0
MBI13_g37002_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.8e-191 673.7 650 60.2
Rhsim01G0061400 Rhododendron simsii HOM05D003622 ORTHO05D004453 2.4e-191 673.3 997 43.7
SalBow6G3081 Salvia bowleyana HOM05D003622 ORTHO05D004453 1.6e-190 670.6 862 48.6
RcHm_v2.0_Chr2g0087611 Rosa chinensis HOM05D003622 ORTHO05D004453 4.5e-190 669.1 832 48.9
MSTRG.26437 Avicennia marina HOM05D003622 ORTHO05D004453 1.0e-189 667.9 868 47.9
MD15G1166400 Malus domestica HOM05D003622 ORTHO05D004453 1.0e-189 667.9 853 48.1
Sed0008371 Sechium edule HOM05D003622 ORTHO05D004453 1.9e-188 663.7 850 48.6
SEGI_29075 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 4.2e-188 662.5 887 46.0
Duzib187G1700 Durio zibethinus HOM05D003622 ORTHO05D004453 1.8e-186 657.1 853 47.8
MD02G1023300 Malus domestica HOM05D003622 ORTHO05D004453 2.3e-186 656.8 847 47.6
TPR.G24803 Trifolium pratense HOM05D003622 ORTHO05D004453 4.0e-186 656.0 869 48.1
Ca_06943_v3 Cicer arietinum L. HOM05D003622 ORTHO05D004453 7.5e-185 651.7 833 49.3
SGA_v2.0_scaffold464G52002 Striga asiatica HOM05D003622 ORTHO05D004453 5.3e-183 645.6 852 48.0
vmacro06154 Vaccinium macrocarpon HOM05D003622 ORTHO05D004453 7.0e-183 645.2 838 47.3
Migut.K00423 Erythranthe guttata HOM05D003622 ORTHO05D004453 7.7e-182 641.7 837 46.7
DCAR_009323 Daucus carota HOM05D003622 ORTHO05D004453 1.8e-178 630.6 889 45.7
Rhsim03G0251600 Rhododendron simsii HOM05D003622 ORTHO05D004453 1.8e-178 630.6 851 47.0
Hma1.2p1_0343F.1_g130930 Hydrangea macrophylla HOM05D003622 ORTHO05D004453 2.6e-177 626.7 698 52.0
TAR636G0579 Trochodendron aralioides HOM05D003622 ORTHO05D004453 5.7e-177 625.5 591 60.9
DCAR_020889 Daucus carota HOM05D003622 ORTHO05D004453 1.8e-175 620.5 854 46.4
Os09g0123100 Oryza sativa ssp. japonica HOM05D003622 ORTHO05D004453 4.5e-174 615.9 824 45.8
HanXRQChr10g0315861 Helianthus annuus HOM05D003622 ORTHO05D004453 7.2e-172 608.6 838 46.1
SGA_v2.0_scaffold63G21826 Striga asiatica HOM05D003622 ORTHO05D004453 1.2e-171 607.8 843 45.4
Zm00001eb095440 Zea mays HOM05D003622 ORTHO05D004453 2.3e-170 603.6 837 44.8
Zm00001eb308130 Zea mays HOM05D003622 ORTHO05D004453 4.0e-170 602.8 838 45.0
HanXRQChr12g0356631 Helianthus annuus HOM05D003622 ORTHO05D004453 6.8e-170 602.1 841 46.0
ECA234G4065 Erigeron canadensis HOM05D003622 ORTHO05D004453 1.2e-169 601.3 826 46.4
Lj7C432T7 Lonicera japonica HOM05D003622 ORTHO05D004453 4.4e-169 599.4 1010 40.3
Migut.J01215 Erythranthe guttata HOM05D003622 ORTHO05D004453 2.8e-168 596.7 850 45.6
THA.LOC104808966 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 3.8e-165 586.3 863 44.1
Thhalv10003437m.g Eutrema salsugineum HOM05D003622 ORTHO05D004453 4.3e-164 582.8 845 44.9
FAN26G1654 Fragaria x ananassa HOM05D003622 ORTHO05D004453 4.7e-163 579.3 935 41.6
Lsat_1_v5_gn_5_91841 Lactuca sativa HOM05D003622 ORTHO05D004453 1.5e-161 574.3 830 46.3
Actinidia07317 Actinidia chinensis HOM05D003622 ORTHO05D004453 1.4e-159 567.8 712 49.3
Gohir.D13G206400 Gossypium hirsutum HOM05D003622 ORTHO05D004453 3.2e-159 566.6 863 42.8
THA.LOC104826553 Tarenaya hassleriana HOM05D003622 ORTHO05D004453 4.1e-159 566.2 862 44.7
CARHR217470 Cardamine hirsuta HOM05D003622 ORTHO05D004453 7.8e-158 562.0 854 43.8
Sp7g06890 Schrenkiella parvula HOM05D003622 ORTHO05D004453 3.0e-157 560.1 848 44.1
Carub.0007s3125 Capsella rubella HOM05D003622 ORTHO05D004453 4.3e-156 556.2 849 42.2
Duzib150G0473 Durio zibethinus HOM05D003622 ORTHO05D004453 7.3e-156 555.4 852 43.1
Mapoly0024s0101 Marchantia polymorpha HOM05D003622 ORTHO05D004453 7.3e-156 555.4 895 42.0
Cpa.g.sc46.43 Carica papaya HOM05D003622 ORTHO05D004453 9.5e-156 555.1 657 51.1
BcaB06g26937 Brassica carinata HOM05D003622 ORTHO05D004453 8.0e-155 552.0 845 43.2
AL7G44290 Arabidopsis lyrata HOM05D003622 ORTHO05D004453 1.5e-153 547.7 848 42.9
C04p43220 Brassica napus HOM05D003622 ORTHO05D004453 1.5e-153 547.7 833 43.7
A04p09700 Brassica napus HOM05D003622 ORTHO05D004453 9.8e-153 545.0 834 43.6
HPP92_000465 Vanilla planifolia HOM05D003622 ORTHO05D004453 1.3e-152 544.7 571 53.9
BcaB02g08053 Brassica carinata HOM05D003622 ORTHO05D004453 1.7e-152 544.3 847 43.8
CSS0014966 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 1.9e-151 540.8 649 49.3
AT5G35430 Arabidopsis thaliana HOM05D003622 ORTHO05D004453 4.1e-151 539.7 847 42.7
CSS0042071 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 4.6e-150 536.2 647 49.0
Oeu056946.1 Olea europaea HOM05D003622 ORTHO05D004453 6.6e-149 532.3 646 50.2
Aa31LG9G18070 Aethionema arabicum HOM05D003622 ORTHO05D004453 1.9e-148 530.8 846 42.3
Ah.09g224810 Amaranthus hybridus HOM05D003622 ORTHO05D004453 8.1e-147 525.4 854 41.5
ClCG06G011530 Citrullus lanatus HOM05D003622 ORTHO05D004453 2.6e-145 520.4 651 48.2
unitig_0.g2718 Utricularia gibba HOM05D003622 ORTHO05D004453 5.4e-143 512.7 894 40.2
Carub.0001s0938 Capsella rubella HOM05D003622 ORTHO05D004453 4.6e-142 509.6 852 40.7
Oeu052762.1 Olea europaea HOM05D003622 ORTHO05D004453 5.6e-140 502.7 644 48.8
Pp3c9_20660 Physcomitrium patens HOM05D003622 ORTHO05D004453 5.1e-133 479.6 842 40.4
Pp3c15_17690 Physcomitrium patens HOM05D003622 ORTHO05D004453 8.4e-128 462.2 834 38.6
SMO351G0297 Selaginella moellendorffii HOM05D003622 ORTHO05D004453 1.8e-122 444.5 828 39.0
BcaC02g09474 Brassica carinata HOM05D003622 ORTHO05D004453 7.6e-113 412.5 835 38.3
Oeu055962.1 Olea europaea HOM05D003622 ORTHO05D004453 1.8e-109 401.4 770 40.1
BolC4t25899H Brassica oleracea HOM05D003622 ORTHO05D004453 4.3e-108 396.7 554 46.2
BraA04t16629Z Brassica rapa HOM05D003622 ORTHO05D004453 9.6e-108 395.6 554 46.4
SHI22466 Sapria himalayana HOM05D003622 ORTHO05D004453 1.6e-102 378.3 660 40.9
CSS0037660 Camellia sinensis var. sinensis HOM05D003622 ORTHO05D004453 5.5e-87 326.6 413 47.0
unitig_748.g7167 Utricularia gibba HOM05D003622 ORTHO05D004453 3.9e-85 320.5 476 42.2
BcaC02g09475 Brassica carinata HOM05D003622 ORTHO05D004453 1.7e-83 315.1 787 33.3
MBI13_g02370_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 1.2e-81 308.9 462 49.6
CBR_g27935 Chara braunii HOM05D000019 ORTHO05D000048 1.2e-68 265.8 695 31.9
Oeu052177.3 Olea europaea HOM05D003622 ORTHO05D004453 7.2e-63 246.5 799 31.0
SEGI_39442 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 3.7e-59 234.2 331 46.2
unitig_748.g7166 Utricularia gibba HOM05D003622 ORTHO05D004453 9.5e-55 219.5 359 43.7
MBI13_g36807_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 4.0e-45 187.6 113 78.8
HPP92_000473 Vanilla planifolia HOM05D003622 ORTHO05D004453 6.0e-41 173.7 228 43.0
BolC4t25898H Brassica oleracea HOM05D003622 ORTHO05D004453 3.9e-40 171.0 325 41.5
AagrBONN_evm.TU.Sc2ySwM_344.2256 Anthoceros agrestis HOM05D003622 ORTHO05D004453 2.5e-39 168.3 301 37.2
A04p09720 Brassica napus HOM05D003622 ORTHO05D004453 3.4e-36 157.9 278 42.1
BraA04t16634Z Brassica rapa HOM05D003622 ORTHO05D004453 1.1e-34 152.9 229 45.9
TAR383G0647 Trochodendron aralioides HOM05D003622 ORTHO05D004453 2.4e-34 151.8 196 46.4
AagrBONN_evm.TU.Sc2ySwM_344.2257 Anthoceros agrestis HOM05D003622 ORTHO05D004453 1.1e-31 142.9 211 41.7
C04p43210 Brassica napus HOM05D003622 ORTHO05D004453 1.1e-31 142.9 201 46.8
Cpa.g.sc46.42 Carica papaya HOM05D003622 ORTHO05D004453 4.3e-31 141.0 151 53.0
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 2.8e-30 138.3 136 57.4
Haze_25503 Corylus avellana HOM05D003622 ORTHO05D004453 1.9e-26 125.6 114 60.5
MBI13_g36805_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 5.4e-26 124.0 140 57.9
Actinidia38718 Actinidia chinensis HOM05D003622 ORTHO05D004453 4.6e-25 120.9 156 43.6
ClCG06G011520 Citrullus lanatus HOM05D003622 ORTHO05D004453 8.9e-21 106.7 113 53.1
SEGI_22443 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 2.2e-19 102.1 119 48.7
HPP92_000472 Vanilla planifolia HOM05D003622 ORTHO05D004453 2.4e-18 98.6 153 44.4
Actinidia38717 Actinidia chinensis HOM05D003622 ORTHO05D004453 3.2e-18 98.2 115 53.0
SEGI_12874 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 7.8e-17 93.6 85 52.9
SEGI_04910 Sequoiadendron giganteum HOM05D003622 ORTHO05D004453 1.0e-16 93.2 152 38.2
GSVIVG01013521001 Vitis vinifera HOM05D004687 ORTHO05D006002 4.3e-15 87.8 67 62.7
MBI13_g48239_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D004453 9.6e-15 86.7 154 41.6
ClCG06G011510 Citrullus lanatus HOM05D003622 ORTHO05D004453 1.6e-14 85.9 109 49.5
SHI22468 Sapria himalayana HOM05D003622 ORTHO05D004453 4.4e-12 77.8 115 41.7
Potri.004G126740 Populus trichocarpa HOM05D000030 ORTHO05D000009 5.8e-12 77.4 72 58.3
Potri.004G126780 Populus trichocarpa HOM05D000030 ORTHO05D000009 7.6e-12 77.0 72 58.3
Sabra10G0016400 Salix brachista HOM05D003622 ORTHO05D004453 2.9e-11 75.1 56 66.1
MBI13_g02371_MAGBIO Magnolia biondii HOM05D003622 ORTHO05D000708 7.1e-10 70.5 62 61.3
CBR_g27932 Chara braunii HOM05D000019 ORTHO05D000002 4.3e-07 61.2 69 47.8
Oeu055964.1 Olea europaea HOM05D001574 ORTHO05D000708 1.3e-06 59.7 45 60.0


User provided reference genes

Program Settings