Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0800G079 Amborella trichopoda HOM05D007419 ORTHO05D009327 0.0e+00 2175.2 1090 100.0
TAR636G1395 Trochodendron aralioides HOM05D007419 ORTHO05D009327 9.9e-214 748.0 1029 43.7
Aqoxy7G03635 Aquilegia oxysepala HOM05D007419 ORTHO05D009327 2.0e-190 670.6 1047 39.4
QL09p047694 Quercus lobata HOM05D007419 ORTHO05D009327 4.9e-189 666.0 1041 40.6
Cfa003423 Carpinus fangiana HOM05D007419 ORTHO05D009327 3.8e-181 639.8 1025 39.8
MD15G1166600 Malus domestica HOM05D007419 ORTHO05D009327 1.9e-180 637.5 1069 38.3
Sabra18G0107200 Salix brachista HOM05D007419 ORTHO05D009327 2.5e-180 637.1 1021 39.1
Potri.018G126300 Populus trichocarpa HOM05D007419 ORTHO05D009327 1.3e-178 631.3 1019 39.4
Gorai.013G235200 Gossypium raimondii HOM05D007419 ORTHO05D009327 1.8e-178 630.9 1025 39.0
COL.COLO4_35160 Corchorus olitorius HOM05D007419 ORTHO05D009327 8.7e-178 628.6 1030 38.4
Lj7A626G73 Lonicera japonica HOM05D007419 ORTHO05D009327 1.9e-177 627.5 1066 37.2
Thecc.09G132300 Theobroma cacao HOM05D007419 ORTHO05D009327 2.5e-177 627.1 1027 39.0
Medtr4g115340 Medicago truncatula HOM05D007419 ORTHO05D009327 4.3e-177 626.3 1030 37.3
Gohir.A13G200700 Gossypium hirsutum HOM05D007419 ORTHO05D009327 3.1e-175 620.2 1013 38.8
Ca_06942_v3 Cicer arietinum L. HOM05D007419 ORTHO05D009327 6.9e-175 619.0 1030 37.2
FAN28G1883 Fragaria x ananassa HOM05D007419 ORTHO05D009327 6.9e-175 619.0 1028 38.0
DCAR_014901 Daucus carota HOM05D007419 ORTHO05D009327 1.2e-174 618.2 1028 37.2
Prupe.7G248700 Prunus persica HOM05D007419 ORTHO05D009327 1.7e-173 614.4 1031 39.1
SEGI_05905 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 2.9e-173 613.6 991 37.0
SEGI_33879 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 2.9e-173 613.6 991 37.0
FAN19G0754 Fragaria x ananassa HOM05D007419 ORTHO05D009327 5.0e-173 612.8 1030 37.6
Lj4g0016099 Lotus japonicus HOM05D007419 ORTHO05D009327 5.0e-173 612.8 1032 36.9
RcHm_v2.0_Chr2g0087621 Rosa chinensis HOM05D007419 ORTHO05D009327 1.1e-172 611.7 1022 38.0
FvH4_1g02590 Fragaria vesca HOM05D007419 ORTHO05D009327 2.5e-172 610.5 1030 37.6
arahy.Tifrunner.gnm1.ann1.XRJX6H Arachis hypogaea HOM05D007419 ORTHO05D009327 7.2e-172 609.0 1033 39.0
FAN26G2390 Fragaria x ananassa HOM05D007419 ORTHO05D009327 7.2e-172 609.0 1024 37.7
CANSAT11G1590 Cannabis sativa HOM05D007419 ORTHO05D009327 9.4e-172 608.6 1030 37.4
TPR.G24826 Trifolium pratense HOM05D007419 ORTHO05D009327 1.2e-171 608.2 1018 36.0
Haze_25509 Corylus avellana HOM05D007419 ORTHO05D009327 1.0e-170 605.1 1120 37.4
Atru.chr7.1950 Acer truncatum HOM05D007419 ORTHO05D009327 2.6e-169 600.5 949 39.8
Sed0020697 Sechium edule HOM05D007419 ORTHO05D009327 2.6e-166 590.5 1031 38.1
Glyma.17G111300 Glycine max HOM05D007419 ORTHO05D009327 1.7e-165 587.8 1039 36.2
arahy.Tifrunner.gnm1.ann1.SLI0XQ Arachis hypogaea HOM05D007419 ORTHO05D009327 6.5e-165 585.9 1009 38.3
Lalb_Chr13g0301571 Lupinus albus HOM05D007419 ORTHO05D009327 4.8e-160 569.7 1028 36.0
Phvul.003G168900 Phaseolus vulgaris HOM05D007419 ORTHO05D009327 4.8e-160 569.7 1035 35.3
Nitab4.5_0003393g0060 Nicotiana tabacum HOM05D007419 ORTHO05D009327 2.4e-159 567.4 1042 35.5
Migut.K00424 Erythranthe guttata HOM05D007419 ORTHO05D009327 5.3e-159 566.2 1023 36.4
VMungo1215G0197 Vigna mungo HOM05D007419 ORTHO05D009327 7.0e-159 565.8 1030 35.1
GSVIVG01015591001 Vitis vinifera HOM05D007419 ORTHO05D009327 4.5e-158 563.1 792 41.8
Rhsim01G0061500 Rhododendron simsii HOM05D007419 ORTHO05D009327 1.7e-157 561.2 1062 36.3
ClCG06G011500 Citrullus lanatus HOM05D007419 ORTHO05D009327 5.0e-157 559.7 1015 37.0
Solyc07g007920.3 Solanum lycopersicum HOM05D007419 ORTHO05D009327 1.1e-156 558.5 1031 35.8
PGSC0003DMG400030908 Solanum tuberosum HOM05D007419 ORTHO05D009327 1.1e-156 558.5 1035 36.0
Ah.09g224820 Amaranthus hybridus HOM05D007419 ORTHO05D009327 4.2e-156 556.6 1030 36.8
AUR62013308 Chenopodium quinoa HOM05D007419 ORTHO05D009327 4.2e-156 556.6 1030 37.2
Cc06_g08060 Coffea canephora HOM05D007419 ORTHO05D009327 4.2e-156 556.6 1056 34.6
Peaxi162Scf00088g01333 Petunia axillaris HOM05D007419 ORTHO05D009327 4.0e-154 550.1 1024 35.9
MELO3C029461.2 Cucumis melo HOM05D007419 ORTHO05D009327 4.4e-153 546.6 1039 36.0
Sopen07g003800 Solanum pennellii HOM05D007419 ORTHO05D009327 6.3e-152 542.7 1031 35.3
vmacro07721 Vaccinium macrocarpon HOM05D007419 ORTHO05D009327 1.1e-151 542.0 1032 35.6
HanXRQChr12g0356641 Helianthus annuus HOM05D007419 ORTHO05D009327 2.2e-149 534.3 1036 35.3
Dinv41474 Davidia involucrata HOM05D003622 ORTHO05D004453 2.9e-149 533.9 1022 35.7
SGA_v2.0_scaffold109G31074 Striga asiatica HOM05D007419 ORTHO05D009327 3.2e-148 530.4 1018 35.2
TWI34G0413 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 3.1e-143 513.8 808 39.6
CAN.G1315.3 Capsicum annuum HOM05D007419 ORTHO05D009327 5.4e-143 513.1 997 35.0
Manes.06G047100 Manihot esculenta HOM05D007419 ORTHO05D009327 1.7e-141 508.1 704 42.6
ECA234G0484 Erigeron canadensis HOM05D007419 ORTHO05D009327 8.5e-141 505.8 1020 35.6
SalBow1G7934 Salvia bowleyana HOM05D007419 ORTHO05D009327 8.5e-141 505.8 1097 33.5
MBI15_g15110_MAGBIO Magnolia biondii HOM05D007419 ORTHO05D009327 3.4e-137 493.8 835 38.2
CsaV3_1G026730 Cucumis sativus L. HOM05D007419 ORTHO05D009327 1.1e-135 488.8 1046 33.7
Lsat_1_v5_gn_5_91781 Lactuca sativa HOM05D007419 ORTHO05D009327 1.8e-135 488.0 1022 33.7
Nitab4.5_0002008g0040 Nicotiana tabacum HOM05D007419 ORTHO05D009327 5.2e-130 469.9 1034 32.4
Psat4g039120 Pisum sativum HOM05D007419 ORTHO05D009327 6.8e-130 469.5 638 40.4
Gohir.D13G206200 Gossypium hirsutum HOM05D007419 ORTHO05D009327 8.9e-130 469.2 702 38.9
Nn8g39549 Nelumbo nucifera HOM05D007419 ORTHO05D009327 2.0e-129 468.0 831 36.1
Os06g0173000 Oryza sativa ssp. japonica HOM05D007419 ORTHO05D009327 1.8e-122 444.9 929 32.5
Eucgr.C01385 Eucalyptus grandis HOM05D007419 ORTHO05D009327 2.0e-121 441.4 746 36.6
Actinidia21952 Actinidia chinensis HOM05D007419 ORTHO05D009327 3.7e-120 437.2 755 38.4
Sc08g0006270 Simmondsia chinensis HOM05D007419 ORTHO05D009327 2.4e-119 434.5 830 33.7
QL09p047989 Quercus lobata HOM05D007419 ORTHO05D009327 1.9e-111 408.3 941 32.6
Duzib168G0167 Durio zibethinus HOM05D007419 ORTHO05D009327 3.5e-110 404.1 1021 31.6
Glyma.13G160200 Glycine max HOM05D007419 ORTHO05D009327 7.6e-105 386.3 1031 30.1
Zm00001eb375320 Zea mays HOM05D007419 ORTHO05D009327 6.9e-98 363.2 865 31.2
FAN23G1807 Fragaria x ananassa HOM05D007419 ORTHO05D009327 4.0e-90 337.4 1035 28.8
Hund26535 Selenicereus undatus HOM05D007419 ORTHO05D009327 2.2e-72 278.5 313 48.2
MD15G1167400 Malus domestica HOM05D007419 ORTHO05D009327 4.1e-66 257.7 240 56.7
QL09p047847 Quercus lobata HOM05D007419 ORTHO05D009327 4.1e-58 231.1 1028 26.8
AUR62011176 Chenopodium quinoa HOM05D007419 ORTHO05D009327 2.6e-57 228.4 219 55.3
SMO340G0190 Selaginella moellendorffii HOM05D007419 ORTHO05D009327 4.5e-57 227.6 982 24.9
SEGI_04675 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 1.4e-55 222.6 348 36.2
CBR_g6680 Chara braunii HOM05D007419 ORTHO05D009327 4.7e-54 217.6 986 23.8
CAN.G778.5 Capsicum annuum HOM05D007419 ORTHO05D009327 6.7e-53 213.8 202 51.0
SEGI_28656 Sequoiadendron giganteum HOM05D007419 ORTHO05D009327 1.8e-37 162.5 819 23.7
GSVIVG01015592001 Vitis vinifera HOM05D007419 ORTHO05D009327 9.1e-34 150.2 234 42.3
Oeu012224.2 Olea europaea HOM05D007419 ORTHO05D009327 2.7e-33 148.7 425 29.4
QL09p046570 Quercus lobata HOM05D007419 ORTHO05D009327 4.2e-31 141.4 418 29.2
QL09p046495 Quercus lobata HOM05D007419 ORTHO05D009327 3.6e-30 138.3 425 28.5
Gohir.D13G206300 Gossypium hirsutum HOM05D007419 ORTHO05D009327 2.3e-29 135.6 218 41.7
Psat4g039080 Pisum sativum HOM05D007419 ORTHO05D009327 2.0e-28 132.5 289 36.7
CSS0048092 Camellia sinensis var. sinensis HOM05D007419 ORTHO05D009327 2.4e-26 125.6 182 45.1
Oeu038257.1 Olea europaea HOM05D007419 ORTHO05D009327 1.6e-22 112.8 92 59.8
TWI34G1676 Tripterygium wilfordii HOM05D007419 ORTHO05D009327 1.8e-21 109.4 188 37.2
Actinidia21951 Actinidia chinensis HOM05D007419 ORTHO05D009327 4.1e-18 98.2 227 36.6
MD08G1122800 Malus domestica HOM05D007419 ORTHO05D009327 1.0e-16 93.6 65 67.7
MSTRG.26436 Avicennia marina HOM05D007419 ORTHO05D009327 3.3e-15 88.6 171 38.6
Eucgr.C01386 Eucalyptus grandis HOM05D007419 ORTHO05D009327 1.0e-13 83.6 160 35.6
QL09p046488 Quercus lobata HOM05D007419 ORTHO05D009327 1.4e-13 83.2 75 54.7
QL09p046563 Quercus lobata HOM05D007419 ORTHO05D009327 1.4e-13 83.2 75 54.7
EL10Ac8g18720 Beta vulgaris HOM05D007419 ORTHO05D009327 9.8e-12 77.0 62 56.5


User provided reference genes

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