Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0800G069 Amborella trichopoda HOM05D006421 ORTHO05D008268 1.9e-206 723.4 801 100.0
TAR625G1222 Trochodendron aralioides HOM05D006421 ORTHO05D008268 1.5e-30 139.0 263 36.9
TAR636G3563 Trochodendron aralioides HOM05D006421 ORTHO05D008268 1.5e-30 139.0 258 38.0
SEGI_00734 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 2.2e-29 135.2 279 35.8
GSVIVG01035871001 Vitis vinifera HOM05D006421 ORTHO05D008268 1.9e-28 132.1 774 54.0
Eucgr.C01728 Eucalyptus grandis HOM05D006421 ORTHO05D008268 2.5e-28 131.7 773 40.1
Actinidia15670 Actinidia chinensis HOM05D006421 ORTHO05D008268 5.5e-28 130.6 408 40.9
Duzib187G1366 Durio zibethinus HOM05D006421 ORTHO05D008268 2.1e-27 128.6 751 50.3
AUR62031532 Chenopodium quinoa HOM05D006421 ORTHO05D008268 1.5e-25 122.5 788 36.7
Gohir.A07G028900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 2.0e-25 122.1 748 44.9
Gorai.001G034500 Gossypium raimondii HOM05D006421 ORTHO05D008268 2.0e-25 122.1 748 41.6
Gohir.D07G032900 Gossypium hirsutum HOM05D006421 ORTHO05D008268 2.6e-25 121.7 748 45.9
FAN27G1287 Fragaria x ananassa HOM05D006421 ORTHO05D008268 3.1e-23 114.8 408 42.9
Nn8g39522 Nelumbo nucifera HOM05D006421 ORTHO05D008268 3.1e-23 114.8 771 52.9
Thecc.09G023300 Theobroma cacao HOM05D006421 ORTHO05D008268 7.0e-23 113.6 257 33.9
CARHR240120 Cardamine hirsuta HOM05D006421 ORTHO05D008268 1.5e-22 112.5 409 39.1
Lj5g0021919 Lotus japonicus HOM05D006421 ORTHO05D008268 3.4e-22 111.3 248 34.7
TWI34G1016 Tripterygium wilfordii HOM05D006421 ORTHO05D008268 4.5e-22 110.9 779 41.1
Cfa013134 Carpinus fangiana HOM05D006421 ORTHO05D008268 5.9e-22 110.5 136 52.2
QL02p021457 Quercus lobata HOM05D006421 ORTHO05D008268 7.7e-22 110.2 143 47.6
THA.LOC104818618 Tarenaya hassleriana HOM05D006421 ORTHO05D008268 1.0e-21 109.8 251 33.1
CiPaw.07G224100 Carya illinoinensis HOM05D006421 ORTHO05D008268 5.0e-21 107.5 137 46.7
TAR636G0610 Trochodendron aralioides HOM05D006421 ORTHO05D008268 5.0e-21 107.5 135 49.6
RcHm_v2.0_Chr6g0297771 Rosa chinensis HOM05D006421 ORTHO05D008268 8.5e-21 106.7 133 50.4
Oeu033132.1 Olea europaea HOM05D006421 ORTHO05D008268 1.9e-20 105.5 253 31.2
Thhalv10024464m.g Eutrema salsugineum HOM05D006421 ORTHO05D008268 2.5e-20 105.1 409 39.1
Atru.chr7.2443 Acer truncatum HOM05D006421 ORTHO05D008268 3.2e-20 104.8 131 47.3
COL.COLO4_18870 Corchorus olitorius HOM05D006421 ORTHO05D008268 3.2e-20 104.8 245 32.7
AT4G32190 Arabidopsis thaliana HOM05D006421 ORTHO05D008268 5.5e-20 104.0 409 37.4
Actinidia14601 Actinidia chinensis HOM05D006421 ORTHO05D008268 7.2e-20 103.6 248 33.5
MD15G1126300 Malus domestica HOM05D006421 ORTHO05D008268 9.4e-20 103.2 127 50.4
Prupe.1G482200 Prunus persica HOM05D006421 ORTHO05D008268 1.6e-19 102.4 125 51.2
ClCG05G016810 Citrullus lanatus HOM05D006421 ORTHO05D008268 2.1e-19 102.1 141 45.4
SEGI_28581 Sequoiadendron giganteum HOM05D006421 ORTHO05D008268 2.1e-19 102.1 279 30.8
Haze_21503 Corylus avellana HOM05D006421 ORTHO05D008268 2.7e-19 101.7 129 50.4
EL10Ac2g04201 Beta vulgaris HOM05D006421 ORTHO05D008268 3.6e-19 101.3 411 43.3
PGR031G1896 Punica granatum HOM05D006421 ORTHO05D008268 3.6e-19 101.3 112 50.9
BcaNung03144 Brassica carinata HOM05D006421 ORTHO05D008268 4.7e-19 100.9 246 32.9
Sp7g29980 Schrenkiella parvula HOM05D006421 ORTHO05D008268 8.0e-19 100.1 408 41.2
Dinv08633 Davidia involucrata HOM05D006421 ORTHO05D008268 1.8e-18 99.0 112 51.8
vmacro05173 Vaccinium macrocarpon HOM05D006421 ORTHO05D008268 2.3e-18 98.6 237 33.8
A01p06150 Brassica napus HOM05D006421 ORTHO05D008268 3.0e-18 98.2 408 41.7
Rhsim07G0159500 Rhododendron simsii HOM05D006421 ORTHO05D008268 3.0e-18 98.2 237 32.5
PGSC0003DMG400004306 Solanum tuberosum HOM05D006421 ORTHO05D008268 5.2e-18 97.4 135 48.1
C01p06780 Brassica napus HOM05D006421 ORTHO05D008268 6.7e-18 97.1 249 32.1
BolC1t00672H Brassica oleracea HOM05D006421 ORTHO05D008268 6.7e-18 97.1 249 32.1
VMungo0647G1945 Vigna mungo HOM05D006421 ORTHO05D008268 8.8e-18 96.7 239 34.3
Hma1.2p1_0243F.1_g100900 Hydrangea macrophylla HOM05D006421 ORTHO05D008268 2.6e-17 95.1 742 46.0
Manes.16G122900 Manihot esculenta HOM05D006421 ORTHO05D008268 2.6e-17 95.1 258 31.4
DCAR_001538 Daucus carota HOM05D006421 ORTHO05D008268 3.3e-17 94.7 407 34.4
TPR.G15679 Trifolium pratense HOM05D006421 ORTHO05D008268 3.3e-17 94.7 235 32.8
Sed0003255 Sechium edule HOM05D006421 ORTHO05D008268 5.7e-17 94.0 145 44.1
Cpa.g.sc217.10 Carica papaya HOM05D006421 ORTHO05D008268 7.4e-17 93.6 129 45.7
ECA246G1400 Erigeron canadensis HOM05D002695 ORTHO05D002964 9.7e-17 93.2 137 46.7
FAN24G1512 Fragaria x ananassa HOM05D006421 ORTHO05D008268 9.7e-17 93.2 737 42.9
BcaC09g52004 Brassica carinata HOM05D006421 ORTHO05D008268 1.3e-16 92.8 249 31.7
Psat6g029040 Pisum sativum HOM05D006421 ORTHO05D008268 1.3e-16 92.8 409 39.6
Solyc08g022030.3 Solanum lycopersicum HOM05D006421 ORTHO05D008268 1.7e-16 92.4 134 46.3
FAN20G2434 Fragaria x ananassa HOM05D006421 ORTHO05D008268 2.2e-16 92.0 766 35.8
PSO170G2190 Papaver somniferum HOM05D006421 ORTHO05D008268 2.8e-16 91.7 268 29.5
CSS0036831 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 3.7e-16 91.3 147 47.6
BcaC03g14918 Brassica carinata HOM05D006421 ORTHO05D008268 4.8e-16 90.9 402 39.1
C02p24100 Brassica napus HOM05D006421 ORTHO05D008268 4.8e-16 90.9 402 46.0
Medtr1g012620 Medicago truncatula HOM05D006421 ORTHO05D008268 6.3e-16 90.5 411 45.5
Peaxi162Scf01131g00117 Petunia axillaris HOM05D006421 ORTHO05D008268 8.2e-16 90.1 97 55.7
AUR62012410 Chenopodium quinoa HOM05D006421 ORTHO05D008268 1.1e-15 89.7 254 29.5
FAN15G0163 Fragaria x ananassa HOM05D006421 ORTHO05D008268 1.1e-15 89.7 408 37.3
CSS0048874 Camellia sinensis var. sinensis HOM05D006421 ORTHO05D008268 1.4e-15 89.4 147 46.9
FvH4_2g28941 Fragaria vesca HOM05D006421 ORTHO05D008268 1.8e-15 89.0 766 44.5
Sabra06G0200100 Salix brachista HOM05D006421 ORTHO05D008268 1.8e-15 89.0 255 29.4
Cc08_g00500 Coffea canephora HOM05D006421 ORTHO05D008268 2.4e-15 88.6 743 47.0
Ca_13033_v3 Cicer arietinum L. HOM05D006421 ORTHO05D008268 4.1e-15 87.8 234 30.8
HanXRQChr16g0510771 Helianthus annuus HOM05D006421 ORTHO05D008268 4.1e-15 87.8 111 47.7
Sopen08g011590 Solanum pennellii HOM05D006421 ORTHO05D008268 4.1e-15 87.8 232 31.5
Potri.006G255800 Populus trichocarpa HOM05D006421 ORTHO05D008268 7.0e-15 87.0 742 44.9
Aa31LG2G17740 Aethionema arabicum HOM05D006421 ORTHO05D008268 9.1e-15 86.7 133 42.9
arahy.Tifrunner.gnm1.ann1.658XMK Arachis hypogaea HOM05D006421 ORTHO05D008268 9.1e-15 86.7 246 31.7
SalBow4G3177 Salvia bowleyana HOM05D006421 ORTHO05D008268 9.1e-15 86.7 411 36.7
Duzib168G2139 Durio zibethinus HOM05D006421 ORTHO05D008268 1.2e-14 86.3 746 45.3
Lj8P705T28 Lonicera japonica HOM05D006421 ORTHO05D008268 1.2e-14 86.3 104 51.9
CAN.G117.5 Capsicum annuum HOM05D006421 ORTHO05D008268 2.6e-14 85.1 105 51.4
Lalb_Chr24g0402151 Lupinus albus HOM05D006421 ORTHO05D008268 2.6e-14 85.1 155 39.4
Nitab4.5_0002408g0020 Nicotiana tabacum HOM05D006421 ORTHO05D008268 2.6e-14 85.1 139 46.0
CANSAT35G0532 Cannabis sativa HOM05D006421 ORTHO05D008268 5.9e-14 84.0 247 32.4
Zm00001eb206500 Zea mays HOM05D006421 ORTHO05D008268 5.9e-14 84.0 109 46.8
MSTRG.11610 Avicennia marina HOM05D006421 ORTHO05D008268 1.0e-13 83.2 100 52.0
Lsat_1_v5_gn_5_30240 Lactuca sativa HOM05D006421 ORTHO05D008268 1.0e-13 83.2 243 29.2
Ciclev10007642m.g Citrus clementina HOM05D006421 ORTHO05D008268 2.9e-13 81.6 259 31.7
AL7G19640 Arabidopsis lyrata HOM05D006421 ORTHO05D008268 3.8e-13 81.3 409 34.2
Hund04507 Selenicereus undatus HOM05D006421 ORTHO05D008268 5.0e-13 80.9 100 51.0
Phvul.001G050600 Phaseolus vulgaris HOM05D006421 ORTHO05D008268 8.5e-13 80.1 251 32.3
SGA_v2.0_scaffold20G09108 Striga asiatica HOM05D002695 ORTHO05D002964 1.5e-12 79.3 167 39.5
Migut.A00033 Erythranthe guttata HOM05D006421 ORTHO05D008268 2.5e-12 78.6 409 33.7
Sc09g0008160 Simmondsia chinensis HOM05D006421 ORTHO05D008268 2.5e-12 78.6 249 30.1
Nitab4.5_0002042g0070 Nicotiana tabacum HOM05D006421 ORTHO05D008268 5.5e-12 77.4 246 29.7
arahy.Tifrunner.gnm1.ann1.1F1BFK Arachis hypogaea HOM05D006421 ORTHO05D008268 7.2e-12 77.0 232 31.5
PSO017G0123 Papaver somniferum HOM05D006421 ORTHO05D008268 3.6e-11 74.7 265 32.8
Potri.018G026300 Populus trichocarpa HOM05D006421 ORTHO05D008268 3.6e-11 74.7 93 48.4
CsaV3_3G046330 Cucumis sativus L. HOM05D006421 ORTHO05D008268 1.0e-10 73.2 82 50.0
unitig_748.g8080 Utricularia gibba HOM05D006421 ORTHO05D008268 1.4e-10 72.8 106 47.2
Os02g0186400 Oryza sativa ssp. japonica HOM05D006421 ORTHO05D008268 1.8e-10 72.4 105 42.9
Glyma.14G115951 Glycine max HOM05D006421 ORTHO05D008268 8.8e-10 70.1 207 30.4
Oeu053117.1 Olea europaea HOM05D006421 ORTHO05D008268 1.2e-09 69.7 235 28.1
Carub.0007s0836 Capsella rubella HOM05D006421 ORTHO05D008268 2.0e-09 68.9 410 43.9
MELO3C003706.2 Cucumis melo HOM05D006421 ORTHO05D008268 1.3e-08 66.2 416 37.3
Glyma.17G211900 Glycine max HOM05D006421 ORTHO05D008268 3.7e-08 64.7 243 28.0
C02p24000 Brassica napus HOM05D006421 ORTHO05D008268 1.4e-07 62.8 133 37.6
Glyma.14G115900 Glycine max HOM05D006421 ORTHO05D008268 1.4e-07 62.8 105 39.0


User provided reference genes

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