Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0800G049 Amborella trichopoda HOM05D006676 ORTHO05D008394 2.8e-55 218.4 112 100.0
Cfa004230 Carpinus fangiana HOM05D006676 ORTHO05D008394 8.2e-15 84.0 84 51.2
Dinv39914 Davidia involucrata HOM05D006676 ORTHO05D008394 5.3e-14 81.3 84 53.6
Lj7A15T51 Lonicera japonica HOM05D006676 ORTHO05D008394 7.0e-14 80.9 85 52.9
Manes.13G131900 Manihot esculenta HOM05D006676 ORTHO05D008394 1.2e-13 80.1 84 50.0
Nn6g32155 Nelumbo nucifera HOM05D006676 ORTHO05D008394 1.6e-13 79.7 84 51.2
QL06p044204 Quercus lobata HOM05D006676 ORTHO05D008394 5.9e-13 77.8 84 50.0
MBI15_g03557_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 7.7e-13 77.4 75 56.0
Hma1.2p1_0261F.1_g105020 Hydrangea macrophylla HOM05D006676 ORTHO05D008394 3.8e-12 75.1 81 50.6
Dinv26772 Davidia involucrata HOM05D006676 ORTHO05D008394 5.0e-12 74.7 84 50.0
MBI04_g03667_MAGBIO Magnolia biondii HOM05D006676 ORTHO05D008394 5.0e-12 74.7 73 54.8
FAN23G1040 Fragaria x ananassa HOM05D006676 ORTHO05D008394 1.9e-11 72.8 83 47.0
Sopen02g015580 Solanum pennellii HOM05D006676 ORTHO05D008394 2.5e-11 72.4 100 44.0
CsaV3_2G017150 Cucumis sativus L. HOM05D006676 ORTHO05D008394 3.2e-11 72.0 85 50.6
TAR625G0739 Trochodendron aralioides HOM05D006676 ORTHO05D008394 4.2e-11 71.6 84 47.6
Sed0003061 Sechium edule HOM05D006676 ORTHO05D008394 5.5e-11 71.2 85 50.6
Sc16g0001490 Simmondsia chinensis HOM05D006676 ORTHO05D008394 5.5e-11 71.2 82 50.0
ClCG02G013070 Citrullus lanatus HOM05D006676 ORTHO05D008394 1.2e-10 70.1 85 49.4
Cc07_g05420 Coffea canephora HOM05D006676 ORTHO05D008394 1.2e-10 70.1 62 58.1
ECA232G0167 Erigeron canadensis HOM05D006676 ORTHO05D008394 1.2e-10 70.1 81 49.4
Actinidia36526 Actinidia chinensis HOM05D006676 ORTHO05D008394 1.6e-10 69.7 63 57.1
Gohir.A02G161300 Gossypium hirsutum HOM05D006676 ORTHO05D008394 1.6e-10 69.7 84 48.8
Potri.007G034600 Populus trichocarpa HOM05D006676 ORTHO05D008394 1.6e-10 69.7 84 45.2
PSO675G6281 Papaver somniferum HOM05D006676 ORTHO05D008394 2.1e-10 69.3 87 43.7
Eucgr.H01944 Eucalyptus grandis HOM05D006676 ORTHO05D008394 2.7e-10 68.9 80 50.0
CiPaw.01G028300 Carya illinoinensis HOM05D006676 ORTHO05D008394 3.6e-10 68.6 84 45.2
MD02G1159200 Malus domestica HOM05D006676 ORTHO05D008394 3.6e-10 68.6 81 45.7
MSTRG.15406 Avicennia marina HOM05D006676 ORTHO05D008394 4.7e-10 68.2 82 47.6
AUR62027231 Chenopodium quinoa HOM05D006676 ORTHO05D008394 4.7e-10 68.2 82 48.8
Duzib187G2000 Durio zibethinus HOM05D006676 ORTHO05D008394 4.7e-10 68.2 84 48.8
Gorai.003G019600 Gossypium raimondii HOM05D006676 ORTHO05D008394 6.1e-10 67.8 84 47.6
PSO541G6387 Papaver somniferum HOM05D006676 ORTHO05D008394 8.0e-10 67.4 87 44.8
PGR102G2956 Punica granatum HOM05D006676 ORTHO05D008394 8.0e-10 67.4 84 45.2
Gohir.D03G019200 Gossypium hirsutum HOM05D006676 ORTHO05D008394 1.0e-09 67.0 84 47.6
TWI09G1529 Tripterygium wilfordii HOM05D006676 ORTHO05D008394 1.4e-09 66.6 83 43.4
Ciclev10026596m.g Citrus clementina HOM05D006676 ORTHO05D008394 2.3e-09 65.9 76 46.1
Prupe.7G145000 Prunus persica HOM05D006676 ORTHO05D008394 2.3e-09 65.9 85 45.9
Hund14112 Selenicereus undatus HOM05D006676 ORTHO05D008394 3.0e-09 65.5 82 48.8
MELO3C020918.2 Cucumis melo HOM05D006676 ORTHO05D008394 4.0e-09 65.1 86 48.8
RcHm_v2.0_Chr2g0103301 Rosa chinensis HOM05D006676 ORTHO05D008394 4.0e-09 65.1 83 41.0
Ca_24806_v3 Cicer arietinum L. HOM05D006676 ORTHO05D008394 5.2e-09 64.7 78 48.7
COL.COLO4_22185 Corchorus olitorius HOM05D006676 ORTHO05D008394 5.2e-09 64.7 84 46.4
Actinidia12084 Actinidia chinensis HOM05D006676 ORTHO05D008394 6.8e-09 64.3 59 55.9
Oeu032926.1 Olea europaea HOM05D006676 ORTHO05D008394 6.8e-09 64.3 82 47.6
arahy.Tifrunner.gnm1.ann1.TQQ6DV Arachis hypogaea HOM05D006676 ORTHO05D008394 8.8e-09 63.9 85 43.5
Sabra07G0030200 Salix brachista HOM05D001814 ORTHO05D001845 1.2e-08 63.5 79 45.6
FvH4_1g14550 Fragaria vesca HOM05D006676 ORTHO05D008394 1.5e-08 63.2 83 42.2
MD00G1067500 Malus domestica HOM05D006676 ORTHO05D008394 1.5e-08 63.2 100 39.0
FAN19G1679 Fragaria x ananassa HOM05D006676 ORTHO05D008394 2.0e-08 62.8 83 42.2
Sc16g0001500 Simmondsia chinensis HOM05D006676 ORTHO05D008394 2.0e-08 62.8 80 46.2
Cpa.g.sc15.74 Carica papaya HOM05D006676 ORTHO05D008394 2.6e-08 62.4 74 45.9
Lj2g0022488 Lotus japonicus HOM05D006676 ORTHO05D008394 2.6e-08 62.4 81 45.7
arahy.Tifrunner.gnm1.ann1.A5DXZZ Arachis hypogaea HOM05D006676 ORTHO05D008394 4.4e-08 61.6 77 45.5
Thecc.01G046000 Theobroma cacao HOM05D006676 ORTHO05D008394 4.4e-08 61.6 84 46.4
Rhsim08G0109100 Rhododendron simsii HOM05D006676 ORTHO05D008394 5.7e-08 61.2 57 56.1
Glyma.01G182300 Glycine max HOM05D006676 ORTHO05D008394 7.5e-08 60.8 83 41.0
HPP92_004789 Vanilla planifolia HOM05D006676 ORTHO05D008394 1.3e-07 60.1 85 42.4
AL7G13870 Arabidopsis lyrata HOM05D006676 ORTHO05D008394 2.2e-07 59.3 95 36.8
CARHR245420 Cardamine hirsuta HOM05D006676 ORTHO05D008394 2.2e-07 59.3 95 36.8
CDE02G4077 Ceratophyllum demersum HOM05D006676 ORTHO05D008394 2.2e-07 59.3 81 39.5
AUR62003241 Chenopodium quinoa HOM05D006676 ORTHO05D008394 2.2e-07 59.3 82 42.7
Psat2g163920 Pisum sativum HOM05D006676 ORTHO05D008394 2.8e-07 58.9 61 52.5
vmacro17885 Vaccinium macrocarpon HOM05D006676 ORTHO05D008394 2.8e-07 58.9 50 60.0
CANSAT01G0168 Cannabis sativa HOM05D006676 ORTHO05D008394 3.7e-07 58.5 86 45.3
Carub.0007s0328 Capsella rubella HOM05D006676 ORTHO05D008394 3.7e-07 58.5 95 36.8
VMungo1215G3052 Vigna mungo HOM05D006676 ORTHO05D008394 3.7e-07 58.5 79 41.8
AT4G37090 Arabidopsis thaliana HOM05D006676 ORTHO05D008394 4.8e-07 58.2 95 35.8
Thhalv10026327m.g Eutrema salsugineum HOM05D006676 ORTHO05D008394 4.8e-07 58.2 78 39.7
Glyma.11G060600 Glycine max HOM05D006676 ORTHO05D008394 4.8e-07 58.2 83 38.6
Lalb_Chr05g0213091 Lupinus albus HOM05D006676 ORTHO05D008394 4.8e-07 58.2 105 33.3
Medtr5g018550 Medicago truncatula HOM05D006676 ORTHO05D008394 6.3e-07 57.8 80 41.2
A01p01920 Brassica napus HOM05D006676 ORTHO05D008394 8.3e-07 57.4 99 33.3
Ah.02g126080 Amaranthus hybridus HOM05D006676 ORTHO05D008394 1.1e-06 57.0 53 56.6
arahy.Tifrunner.gnm1.ann1.MI0500 Arachis hypogaea HOM05D006676 ORTHO05D008394 1.1e-06 57.0 56 53.6
GSVIVG01004606001 Vitis vinifera HOM05D006676 ORTHO05D008394 1.1e-06 57.0 84 41.7
GSVIVG01005096001 Vitis vinifera HOM05D006676 ORTHO05D008394 1.1e-06 57.0 84 41.7
EL10Ac6g14836 Beta vulgaris HOM05D006676 ORTHO05D008394 1.8e-06 56.2 82 42.7
Phvul.002G023300 Phaseolus vulgaris HOM05D006676 ORTHO05D008394 1.8e-06 56.2 79 39.2
BraA01t00181Z Brassica rapa HOM05D006676 ORTHO05D008394 2.4e-06 55.8 95 35.8
BcaNung03502 Brassica carinata HOM05D006676 ORTHO05D008394 3.1e-06 55.5 99 34.3
HanXRQChr15g0489591 Helianthus annuus HOM05D006676 ORTHO05D008394 3.1e-06 55.5 53 54.7
FAN26G0249 Fragaria x ananassa HOM05D006676 ORTHO05D008394 4.1e-06 55.1 83 38.6
Os02g0186700 Oryza sativa ssp. japonica HOM05D006676 ORTHO05D008394 4.1e-06 55.1 80 38.8
DCAR_025672 Daucus carota HOM05D006676 ORTHO05D008394 5.4e-06 54.7 75 42.7
C01p02080 Brassica napus HOM05D006676 ORTHO05D008394 7.0e-06 54.3 95 34.7
BolC1t00200H Brassica oleracea HOM05D006676 ORTHO05D008394 7.0e-06 54.3 95 34.7
TPR.G29856 Trifolium pratense HOM05D006676 ORTHO05D008394 7.0e-06 54.3 44 63.6
Aqoxy6G00953 Aquilegia oxysepala HOM05D006676 ORTHO05D008394 9.1e-06 53.9 84 38.1
Sp7g34680 Schrenkiella parvula HOM05D006676 ORTHO05D008394 9.1e-06 53.9 89 36.0


User provided reference genes

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