Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0800G042 Amborella trichopoda HOM05D005830 ORTHO05D007212 1.3e-191 672.9 359 100.0
CiPaw.03G250100 Carya illinoinensis HOM05D005830 ORTHO05D007212 1.2e-83 314.3 399 48.9
GSVIVG01012831001 Vitis vinifera HOM05D005830 ORTHO05D007212 3.5e-83 312.8 368 51.1
CiPaw.04G176400 Carya illinoinensis HOM05D005830 ORTHO05D007212 4.6e-83 312.4 398 49.0
Nn2g12145 Nelumbo nucifera HOM05D005830 ORTHO05D007212 4.3e-81 305.8 395 49.9
Potri.018G123400 Populus trichocarpa HOM05D005830 ORTHO05D007212 5.6e-81 305.4 379 50.4
Cfa002293 Carpinus fangiana HOM05D005830 ORTHO05D007212 9.5e-81 304.7 403 47.6
TAR636G3280 Trochodendron aralioides HOM05D005830 ORTHO05D007212 9.5e-81 304.7 396 48.2
Prupe.7G250400 Prunus persica HOM05D005830 ORTHO05D007212 2.8e-80 303.1 396 48.5
Ciclev10008496m.g Citrus clementina HOM05D005830 ORTHO05D007212 6.2e-80 302.0 397 48.1
QL02p090253 Quercus lobata HOM05D005830 ORTHO05D007212 8.1e-80 301.6 408 46.6
Haze_25480 Corylus avellana HOM05D005830 ORTHO05D007212 2.3e-79 300.1 404 46.8
Lsat_1_v5_gn_5_93541 Lactuca sativa HOM05D005830 ORTHO05D007212 3.1e-79 299.7 379 48.8
MD02G1021100 Malus domestica HOM05D005830 ORTHO05D007212 5.2e-79 298.9 375 47.7
Manes.06G045500 Manihot esculenta HOM05D005830 ORTHO05D007212 5.2e-79 298.9 390 47.4
Lj9A701G52 Lonicera japonica HOM05D005830 ORTHO05D007212 1.5e-78 297.4 380 49.2
FAN28G1643 Fragaria x ananassa HOM05D005830 ORTHO05D007212 2.0e-78 297.0 380 48.4
TAR625G0228 Trochodendron aralioides HOM05D005830 ORTHO05D007212 2.0e-78 297.0 399 48.4
Aqoxy7G03615 Aquilegia oxysepala HOM05D005830 ORTHO05D007212 9.9e-78 294.7 401 47.1
Sabra18G0105100 Salix brachista HOM05D005830 ORTHO05D007212 9.9e-78 294.7 377 47.7
Sed0009357 Sechium edule HOM05D005830 ORTHO05D007212 1.3e-77 294.3 385 47.3
TWI63G1326 Tripterygium wilfordii HOM05D005830 ORTHO05D007212 1.3e-77 294.3 378 48.1
FAN23G1789 Fragaria x ananassa HOM05D005830 ORTHO05D007212 2.2e-77 293.5 380 47.9
RcHm_v2.0_Chr2g0087391 Rosa chinensis HOM05D005830 ORTHO05D007212 2.2e-77 293.5 386 46.1
Nn8g39584 Nelumbo nucifera HOM05D005830 ORTHO05D007212 2.9e-77 293.1 379 49.3
FvH4_1g02430 Fragaria vesca HOM05D005830 ORTHO05D007212 4.9e-77 292.4 380 47.9
FAN19G1317 Fragaria x ananassa HOM05D005830 ORTHO05D007212 4.9e-77 292.4 380 47.9
CsaV3_1G027980 Cucumis sativus L. HOM05D005830 ORTHO05D007212 6.4e-77 292.0 385 45.2
ClCG06G011670 Citrullus lanatus HOM05D005830 ORTHO05D007212 1.1e-76 291.2 392 46.2
Potri.006G063600 Populus trichocarpa HOM05D005830 ORTHO05D007212 1.1e-76 291.2 379 47.2
CANSAT11G0221 Cannabis sativa HOM05D005830 ORTHO05D007212 1.9e-76 290.4 402 45.0
MD15G1164200 Malus domestica HOM05D005830 ORTHO05D007212 3.2e-76 289.7 372 47.6
Sc08g0006200 Simmondsia chinensis HOM05D005830 ORTHO05D007212 3.2e-76 289.7 378 48.1
MELO3C010295.2 Cucumis melo HOM05D005830 ORTHO05D007212 5.4e-76 288.9 387 45.0
Duzib150G0784 Durio zibethinus HOM05D005830 ORTHO05D007212 7.1e-76 288.5 379 48.5
Gorai.009G015000 Gossypium raimondii HOM05D005830 ORTHO05D007212 1.2e-75 287.7 384 46.4
Atru.chr7.1975 Acer truncatum HOM05D005830 ORTHO05D007212 1.6e-75 287.3 389 45.8
Phvul.003G170800 Phaseolus vulgaris HOM05D005830 ORTHO05D007212 2.7e-75 286.6 365 48.2
Sabra06G0046300 Salix brachista HOM05D005830 ORTHO05D007212 2.7e-75 286.6 383 46.0
Dinv41459 Davidia involucrata HOM05D005830 ORTHO05D007212 3.5e-75 286.2 385 48.3
VMungo1215G0722 Vigna mungo HOM05D005830 ORTHO05D007212 3.5e-75 286.2 361 48.5
Glyma.17G109300 Glycine max HOM05D005830 ORTHO05D007212 6.0e-75 285.4 360 49.4
Hma1.2p1_0497F.1_g166530 Hydrangea macrophylla HOM05D005830 ORTHO05D007212 7.8e-75 285.0 398 45.2
MBI14_g38128_MAGBIO Magnolia biondii HOM05D005830 ORTHO05D007212 1.0e-74 284.6 396 46.2
Nitab4.5_0000704g0010 Nicotiana tabacum HOM05D005830 ORTHO05D007212 1.3e-74 284.3 396 43.4
Cpa.g.sc46.60 Carica papaya HOM05D005830 ORTHO05D007212 1.7e-74 283.9 389 46.0
Nitab4.5_0002267g0050 Nicotiana tabacum HOM05D005830 ORTHO05D007212 8.6e-74 281.6 396 43.4
vmacro06159 Vaccinium macrocarpon HOM05D005830 ORTHO05D007212 1.1e-73 281.2 399 45.6
HanXRQChr12g0356861 Helianthus annuus HOM05D005830 ORTHO05D007212 1.5e-73 280.8 384 45.6
Gohir.D05G014900 Gossypium hirsutum HOM05D005830 ORTHO05D007212 2.5e-73 280.0 384 45.3
Gohir.A05G013800 Gossypium hirsutum HOM05D005830 ORTHO05D007212 1.2e-72 277.7 378 46.3
Eucgr.C00582 Eucalyptus grandis HOM05D005830 ORTHO05D007212 3.6e-72 276.2 387 45.0
Dinv36464 Davidia involucrata HOM05D005830 ORTHO05D007212 4.7e-72 275.8 396 45.2
arahy.Tifrunner.gnm1.ann1.N1L3G9 Arachis hypogaea HOM05D005830 ORTHO05D007212 3.1e-71 273.1 385 46.2
Manes.14G117500 Manihot esculenta HOM05D005830 ORTHO05D007212 4.0e-71 272.7 393 43.8
HanXRQChr10g0314411 Helianthus annuus HOM05D005830 ORTHO05D007212 8.9e-71 271.6 379 44.9
Lalb_Chr13g0301421 Lupinus albus HOM05D005830 ORTHO05D007212 1.2e-70 271.2 384 46.1
Thecc.09G135000 Theobroma cacao HOM05D005830 ORTHO05D007212 4.4e-70 269.2 387 45.2
Peaxi162Scf00088g00106 Petunia axillaris HOM05D005830 ORTHO05D007212 9.9e-70 268.1 419 41.5
Migut.K00413 Erythranthe guttata HOM05D005830 ORTHO05D007212 1.3e-69 267.7 381 46.7
COL.COLO4_15558 Corchorus olitorius HOM05D005830 ORTHO05D007212 1.7e-69 267.3 387 43.7
DCAR_020892 Daucus carota HOM05D005830 ORTHO05D007212 2.9e-69 266.5 377 44.8
Lj4g0000922 Lotus japonicus HOM05D005830 ORTHO05D007212 3.8e-69 266.2 364 47.3
TPR.G956 Trifolium pratense HOM05D005830 ORTHO05D007212 6.4e-69 265.4 360 47.2
Ah.09g224370 Amaranthus hybridus HOM05D005830 ORTHO05D007212 1.4e-68 264.2 393 42.7
AUR62013287 Chenopodium quinoa HOM05D005830 ORTHO05D007212 2.4e-68 263.5 408 42.9
PGR142G1093 Punica granatum HOM05D005830 ORTHO05D007212 2.4e-68 263.5 360 46.4
Ca_21656_v3 Cicer arietinum L. HOM05D005830 ORTHO05D007212 3.2e-68 263.1 366 47.3
Cc06_g07840 Coffea canephora HOM05D005830 ORTHO05D007212 9.2e-68 261.5 404 42.3
Psat4g036280 Pisum sativum HOM05D005830 ORTHO05D007212 2.3e-66 256.9 364 45.1
EL10Ac8g18756 Beta vulgaris HOM05D005830 ORTHO05D007212 5.1e-66 255.8 402 42.5
SalBow1G4219 Salvia bowleyana HOM05D005830 ORTHO05D007212 5.1e-66 255.8 356 47.2
Sabra06G0201100 Salix brachista HOM05D005830 ORTHO05D007212 7.3e-65 251.9 391 38.6
Medtr4g115690 Medicago truncatula HOM05D005830 ORTHO05D007212 2.1e-64 250.4 332 45.8
Gohir.D05G058400 Gossypium hirsutum HOM05D005830 ORTHO05D007212 1.8e-63 247.3 384 41.4
Gorai.009G059500 Gossypium raimondii HOM05D005830 ORTHO05D007212 3.1e-63 246.5 384 41.4
MSTRG.10652 Avicennia marina HOM05D005830 ORTHO05D007212 5.3e-63 245.7 363 43.3
Oeu056965.1 Olea europaea HOM05D005830 ORTHO05D007212 6.9e-63 245.4 346 43.9
Ciclev10010445m.g Citrus clementina HOM05D005830 ORTHO05D007212 1.2e-62 244.6 384 39.6
CAN.G1382.7 Capsicum annuum HOM05D005830 ORTHO05D007212 2.0e-62 243.8 453 37.5
Sopen07g003650 Solanum pennellii HOM05D005830 ORTHO05D007212 2.0e-62 243.8 371 41.8
Potri.006G256900 Populus trichocarpa HOM05D005830 ORTHO05D007212 5.8e-62 242.3 387 40.6
Solyc07g007660.1 Solanum lycopersicum HOM05D005830 ORTHO05D007212 7.6e-62 241.9 371 41.5
Medtr3g106630 Medicago truncatula HOM05D005830 ORTHO05D007212 1.7e-61 240.7 385 41.0
PGSC0003DMG400030680 Solanum tuberosum HOM05D005830 ORTHO05D007212 1.7e-61 240.7 378 42.6
COL.COLO4_18887 Corchorus olitorius HOM05D005830 ORTHO05D007212 2.2e-61 240.4 381 40.4
Thecc.09G021700 Theobroma cacao HOM05D005830 ORTHO05D007212 2.2e-61 240.4 395 41.3
Oeu052743.1 Olea europaea HOM05D005830 ORTHO05D007212 4.9e-61 239.2 379 39.8
TPR.G3136 Trifolium pratense HOM05D005830 ORTHO05D007212 6.4e-61 238.8 382 42.1
Glyma.04G065400 Glycine max HOM05D005830 ORTHO05D007212 1.1e-60 238.0 371 43.1
Eucgr.C02754 Eucalyptus grandis HOM05D005830 ORTHO05D007212 1.9e-60 237.3 376 40.2
VMungo1309G0557 Vigna mungo HOM05D005830 ORTHO05D007212 1.9e-60 237.3 375 43.2
vmacro05164 Vaccinium macrocarpon HOM05D005830 ORTHO05D007212 3.2e-60 236.5 387 40.6
QL02p021141 Quercus lobata HOM05D005830 ORTHO05D007212 9.3e-60 235.0 388 39.7
FAN27G1157 Fragaria x ananassa HOM05D005830 ORTHO05D007212 2.1e-59 233.8 362 41.2
RcHm_v2.0_Chr6g0297551 Rosa chinensis HOM05D005830 ORTHO05D007212 3.5e-59 233.0 364 41.8
Phvul.009G091500 Phaseolus vulgaris HOM05D005830 ORTHO05D007212 7.8e-59 231.9 382 41.6
Psat5g029840 Pisum sativum HOM05D005830 ORTHO05D007212 1.3e-58 231.1 378 42.3
FAN24G0474 Fragaria x ananassa HOM05D005830 ORTHO05D007212 1.7e-58 230.7 369 41.5
Prupe.1G483400 Prunus persica HOM05D005830 ORTHO05D007212 1.7e-58 230.7 376 41.2
FAN15G2262 Fragaria x ananassa HOM05D005830 ORTHO05D007212 2.3e-58 230.3 373 41.0
MD15G1128100 Malus domestica HOM05D005830 ORTHO05D007212 2.3e-58 230.3 365 42.5
FvH4_2g28800 Fragaria vesca HOM05D005830 ORTHO05D007212 3.9e-58 229.6 369 41.2
FAN20G1042 Fragaria x ananassa HOM05D005830 ORTHO05D007212 3.9e-58 229.6 373 40.8
Ca_15753_v3 Cicer arietinum L. HOM05D005830 ORTHO05D007212 1.5e-57 227.6 380 42.4
Lj1g0023135 Lotus japonicus HOM05D005830 ORTHO05D007212 1.9e-57 227.3 371 41.8
Rhsim03G0252000 Rhododendron simsii HOM05D005830 ORTHO05D007212 6.2e-56 222.2 262 51.5
CiPaw.08G009900 Carya illinoinensis HOM05D005830 ORTHO05D007212 1.8e-55 220.7 393 38.9
Manes.16G124200 Manihot esculenta HOM05D002641 ORTHO05D001537 6.9e-55 218.8 379 38.5
Dinv05006 Davidia involucrata HOM05D005830 ORTHO05D007212 2.6e-54 216.9 387 38.5
Aqoxy4G01850 Aquilegia oxysepala HOM05D005830 ORTHO05D007212 3.4e-54 216.5 291 46.0
unitig_0.g2712 Utricularia gibba HOM05D005830 ORTHO05D007212 4.5e-54 216.1 352 42.3
Rhsim07G0159800 Rhododendron simsii HOM05D005830 ORTHO05D007212 7.6e-54 215.3 359 38.2
Cfa013122 Carpinus fangiana HOM05D005830 ORTHO05D007212 9.9e-54 214.9 385 38.2
CiPaw.07G225200 Carya illinoinensis HOM05D005830 ORTHO05D007212 2.9e-53 213.4 389 37.0
Sc06g0000560 Simmondsia chinensis HOM05D005830 ORTHO05D007212 2.9e-53 213.4 396 37.9
ECA234G3193 Erigeron canadensis HOM05D005830 ORTHO05D007212 1.4e-52 211.1 267 47.2
Actinidia14593 Actinidia chinensis HOM05D000485 ORTHO05D000341 1.9e-52 210.7 289 42.2
Lalb_Chr11g0063651 Lupinus albus HOM05D005830 ORTHO05D007212 1.9e-52 210.7 378 39.2
HPP92_010549 Vanilla planifolia HOM05D005830 ORTHO05D007212 4.2e-52 209.5 360 42.5
EL10Ac2g04187 Beta vulgaris HOM05D005830 ORTHO05D007212 2.8e-48 196.8 283 38.9
Ah.16g104630 Amaranthus hybridus HOM05D000524 ORTHO05D000381 3.1e-47 193.4 281 38.4
AUR62011200 Chenopodium quinoa HOM05D005830 ORTHO05D007212 1.7e-45 187.6 321 39.9
SEGI_15152 Sequoiadendron giganteum HOM05D005830 ORTHO05D007212 8.4e-45 185.3 454 32.8
Actinidia26367 Actinidia chinensis HOM05D005830 ORTHO05D007212 2.2e-37 160.6 373 36.5
AUR62012424 Chenopodium quinoa HOM05D005830 ORTHO05D007212 1.6e-35 154.5 362 33.1
arahy.Tifrunner.gnm1.ann1.TZG1XT Arachis hypogaea HOM05D000451 ORTHO05D000351 2.7e-35 153.7 346 33.5
HPP92_027271 Vanilla planifolia HOM05D005830 ORTHO05D007212 1.8e-31 141.0 160 45.6
FAN26G3009 Fragaria x ananassa HOM05D005830 ORTHO05D007212 1.2e-30 138.3 165 49.7
AUR62031547 Chenopodium quinoa HOM05D005830 ORTHO05D007212 1.1e-28 131.7 237 32.9
Glyma.16G087650 Glycine max HOM05D005830 ORTHO05D007212 1.3e-24 118.2 160 43.8
Lj7P437T13 Lonicera japonica HOM05D005830 ORTHO05D007212 4.5e-22 109.8 155 41.9
Medtr4g014150 Medicago truncatula HOM05D005830 ORTHO05D007212 2.3e-18 97.4 242 30.6
QL08p064688 Quercus lobata HOM05D005830 ORTHO05D007212 9.7e-17 92.0 146 43.8
Glyma.06G066550 Glycine max HOM05D005830 ORTHO05D007212 1.4e-15 88.2 121 42.1
Haze_21491 Corylus avellana HOM05D005830 ORTHO05D007212 3.6e-11 73.6 153 34.0
Glyma.01G070700 Glycine max HOM05D002723 ORTHO05D003240 4.7e-11 73.2 110 40.0
CANSAT11G0844 Cannabis sativa HOM05D002008 ORTHO05D002054 1.3e-08 65.1 99 35.4
VMungo1309G2190 Vigna mungo HOM05D005830 ORTHO05D026219 5.9e-06 56.2 72 37.5


User provided reference genes

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