Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0800G015 Amborella trichopoda HOM05D006739 ORTHO05D008402 1.7e-95 354.4 208 100.0
Ciclev10000605m.g Citrus clementina HOM05D006739 ORTHO05D008402 1.4e-20 105.5 148 62.2
MBI16_g36544_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 4.0e-20 104.0 175 56.0
CiPaw.08G057600 Carya illinoinensis HOM05D006739 ORTHO05D008402 1.5e-19 102.1 120 45.8
Hma1.2p1_0010F.1_g006410 Hydrangea macrophylla HOM05D006739 ORTHO05D008402 1.5e-19 102.1 180 51.7
TAR152G0001 Trochodendron aralioides HOM05D006739 ORTHO05D008402 4.5e-19 100.5 174 50.6
Atru.chr13.953 Acer truncatum HOM05D006739 ORTHO05D008402 5.8e-19 100.1 155 56.1
RcHm_v2.0_Chr7g0233521 Rosa chinensis HOM05D006739 ORTHO05D008402 9.9e-19 99.4 154 57.8
Eucgr.F02164 Eucalyptus grandis HOM05D006739 ORTHO05D008402 8.4e-18 96.3 146 57.5
QL12p039876 Quercus lobata HOM05D006739 ORTHO05D008402 1.4e-17 95.5 104 74.0
MD15G1390100 Malus domestica HOM05D006739 ORTHO05D008402 1.9e-17 95.1 154 58.4
MD08G1206600 Malus domestica HOM05D006739 ORTHO05D008402 3.2e-17 94.4 113 48.7
Cfa013823 Carpinus fangiana HOM05D006739 ORTHO05D008402 5.4e-17 93.6 112 48.2
Sc15g0003370 Simmondsia chinensis HOM05D006739 ORTHO05D008402 5.4e-17 93.6 100 76.0
Haze_22495 Corylus avellana HOM05D006739 ORTHO05D008402 1.6e-16 92.0 120 45.0
CSS0036090 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 4.6e-16 90.5 114 48.2
Dinv44882 Davidia involucrata HOM05D006739 ORTHO05D008402 4.6e-16 90.5 160 58.1
Oeu020282.1 Olea europaea HOM05D006739 ORTHO05D008402 4.6e-16 90.5 104 73.1
Manes.05G187600 Manihot esculenta HOM05D006739 ORTHO05D008402 1.0e-15 89.4 135 43.0
TAR628G0153 Trochodendron aralioides HOM05D006739 ORTHO05D008402 1.3e-15 89.0 123 45.5
EL10Ac1g00466 Beta vulgaris HOM05D006739 ORTHO05D008402 2.3e-15 88.2 122 63.1
PSO700G0042 Papaver somniferum HOM05D006739 ORTHO05D008402 3.9e-15 87.4 113 64.6
Aqoxy5G01872 Aquilegia oxysepala HOM05D006739 ORTHO05D008402 5.1e-15 87.0 141 57.4
PSO761G0270 Papaver somniferum HOM05D006739 ORTHO05D008402 6.7e-15 86.7 113 64.6
Nitab4.5_0002667g0060 Nicotiana tabacum HOM05D006739 ORTHO05D008402 1.1e-14 85.9 103 68.9
TWI56G0071 Tripterygium wilfordii HOM05D006739 ORTHO05D008402 2.5e-14 84.7 117 44.4
AUR62019126 Chenopodium quinoa HOM05D006739 ORTHO05D008402 9.6e-14 82.8 120 61.7
Aa31LG1G4990 Aethionema arabicum HOM05D006739 ORTHO05D008402 1.3e-13 82.4 146 39.0
Ah.05g171720 Amaranthus hybridus HOM05D006739 ORTHO05D008402 2.1e-13 81.6 220 43.6
Carub.0001s0928 Capsella rubella HOM05D006739 ORTHO05D008402 2.8e-13 81.3 175 49.1
Lsat_1_v5_gn_1_781 Lactuca sativa HOM05D006739 ORTHO05D008402 4.8e-13 80.5 160 34.4
PGR042G0142 Punica granatum HOM05D006739 ORTHO05D008402 6.2e-13 80.1 116 66.4
MSTRG.24837 Avicennia marina HOM05D006739 ORTHO05D008402 1.1e-12 79.3 157 54.1
AT1G09900 Arabidopsis thaliana HOM05D006739 ORTHO05D008402 1.4e-12 79.0 165 50.9
DCAR_019326 Daucus carota HOM05D006739 ORTHO05D008402 1.4e-12 79.0 102 44.1
AL1G20500 Arabidopsis lyrata HOM05D006739 ORTHO05D008402 2.4e-12 78.2 142 53.5
CDE07G2071 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 2.4e-12 78.2 110 46.4
Nitab4.5_0002667g0050 Nicotiana tabacum HOM05D006739 ORTHO05D008402 2.4e-12 78.2 103 68.0
Migut.N00013 Erythranthe guttata HOM05D006739 ORTHO05D008402 3.1e-12 77.8 117 41.9
THA.LOC104816789 Tarenaya hassleriana HOM05D006739 ORTHO05D008402 4.0e-12 77.4 154 52.6
Potri.002G109500 Populus trichocarpa HOM05D006739 ORTHO05D008402 5.3e-12 77.0 103 45.6
Sabra02G0086200 Salix brachista HOM05D006739 ORTHO05D008402 5.3e-12 77.0 113 43.4
TAR381G0861 Trochodendron aralioides HOM05D006739 ORTHO05D008402 6.9e-12 76.6 112 42.9
ECA247G1663 Erigeron canadensis HOM05D006739 ORTHO05D008402 9.0e-12 76.3 95 44.2
CSS0033703 Camellia sinensis var. sinensis HOM05D006739 ORTHO05D008402 1.2e-11 75.9 105 45.7
Actinidia10267 Actinidia chinensis HOM05D006739 ORTHO05D008402 1.5e-11 75.5 143 36.4
Sopen06g003030 Solanum pennellii HOM05D006739 ORTHO05D008402 1.5e-11 75.5 103 67.0
PGSC0003DMG400014713 Solanum tuberosum HOM05D006739 ORTHO05D008402 2.0e-11 75.1 116 62.1
PGSC0003DMG400027357 Solanum tuberosum HOM05D006739 ORTHO05D008402 2.0e-11 75.1 116 62.1
FAN08G0673 Fragaria x ananassa HOM05D006739 ORTHO05D008402 3.4e-11 74.3 101 44.6
Peaxi162Scf01212g00003 Petunia axillaris HOM05D006739 ORTHO05D008402 3.4e-11 74.3 93 47.3
VMungo0647G0534 Vigna mungo HOM05D006739 ORTHO05D008402 3.4e-11 74.3 83 48.2
CARHR009960 Cardamine hirsuta HOM05D006739 ORTHO05D008402 4.5e-11 73.9 167 50.3
Phvul.008G183900 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 4.5e-11 73.9 64 57.8
Prupe.1G539000 Prunus persica HOM05D006739 ORTHO05D008402 5.8e-11 73.6 81 50.6
C05p08020 Brassica napus HOM05D006739 ORTHO05D008402 9.9e-11 72.8 114 60.5
FvH4_5g34030 Fragaria vesca HOM05D006739 ORTHO05D008402 9.9e-11 72.8 101 43.6
FAN18G3137 Fragaria x ananassa HOM05D006739 ORTHO05D008402 9.9e-11 72.8 101 43.6
HanXRQChr11g0324241 Helianthus annuus HOM05D006739 ORTHO05D008402 9.9e-11 72.8 127 39.4
Phvul.009G145100 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 9.9e-11 72.8 115 42.6
VMungo1309G0048 Vigna mungo HOM05D006739 ORTHO05D008402 9.9e-11 72.8 115 41.7
A06p06610 Brassica napus HOM05D006739 ORTHO05D008402 1.3e-10 72.4 61 55.7
Sp1g08530 Schrenkiella parvula HOM05D006739 ORTHO05D008402 1.3e-10 72.4 89 43.8
BcaC05g24834 Brassica carinata HOM05D006739 ORTHO05D008402 2.2e-10 71.6 83 48.2
BraA06t23875Z Brassica rapa HOM05D006739 ORTHO05D008402 2.2e-10 71.6 61 55.7
Glyma.02G216900 Glycine max HOM05D006739 ORTHO05D008402 2.2e-10 71.6 75 49.3
arahy.Tifrunner.gnm1.ann1.CH37P4 Arachis hypogaea HOM05D006739 ORTHO05D008402 2.9e-10 71.2 146 47.9
Phvul.008G184000 Phaseolus vulgaris HOM05D006739 ORTHO05D008402 2.9e-10 71.2 81 48.1
Duzib093G0111 Durio zibethinus HOM05D006739 ORTHO05D008402 3.8e-10 70.9 194 45.9
MBI16_g14339_MAGBIO Magnolia biondii HOM05D006739 ORTHO05D008402 3.8e-10 70.9 74 77.0
Glyma.14G184200 Glycine max HOM05D006739 ORTHO05D008402 4.9e-10 70.5 125 56.8
VMungo0647G1229 Vigna mungo HOM05D006739 ORTHO05D008402 4.9e-10 70.5 82 45.1
CDE04G0064 Ceratophyllum demersum HOM05D006739 ORTHO05D008402 6.4e-10 70.1 88 50.0
Ca_05489_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 6.4e-10 70.1 103 38.8
Ca_29619_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 6.4e-10 70.1 103 38.8
Glyma.06G092600 Glycine max HOM05D006739 ORTHO05D008402 6.4e-10 70.1 121 43.0
BolC5t29554H Brassica oleracea HOM05D006739 ORTHO05D008402 1.1e-09 69.3 98 40.8
Glyma.04G090900 Glycine max HOM05D006739 ORTHO05D008402 1.1e-09 69.3 120 41.7
Cc10_g08260 Coffea canephora HOM05D008425 ORTHO05D010555 1.4e-09 68.9 72 73.6
SalBow5G4649 Salvia bowleyana HOM05D006739 ORTHO05D008402 1.4e-09 68.9 85 42.4
arahy.Tifrunner.gnm1.ann1.M3C1JT Arachis hypogaea HOM05D006739 ORTHO05D008402 1.9e-09 68.6 179 30.2
ClCG08G011830 Citrullus lanatus HOM05D006739 ORTHO05D008402 1.9e-09 68.6 100 43.0
AUR62014385 Chenopodium quinoa HOM05D006739 ORTHO05D008402 3.2e-09 67.8 120 57.5
Sed0004950 Sechium edule HOM05D006739 ORTHO05D008402 3.2e-09 67.8 55 60.0
CDE06G1140 Ceratophyllum demersum HOM05D002753 ORTHO05D003097 4.2e-09 67.4 60 58.3
Oeu012210.1 Olea europaea HOM05D006739 ORTHO05D008402 4.2e-09 67.4 72 72.2
CAN.G941.26 Capsicum annuum HOM05D006739 ORTHO05D008402 7.1e-09 66.6 94 68.1
Lj1g0027306 Lotus japonicus HOM05D006739 ORTHO05D008402 2.1e-08 65.1 95 44.2
DCAR_012846 Daucus carota HOM05D006739 ORTHO05D008402 3.5e-08 64.3 71 46.5
CsaV3_2G030450 Cucumis sativus L. HOM05D006739 ORTHO05D008402 4.6e-08 63.9 45 66.7
SGA_v2.0_scaffold123G33426 Striga asiatica HOM05D006739 ORTHO05D008402 6.0e-08 63.5 43 67.4
MELO3C011106.2 Cucumis melo HOM05D006739 ORTHO05D008402 7.9e-08 63.2 44 68.2
Gohir.D06G029600 Gossypium hirsutum HOM05D006739 ORTHO05D008402 7.9e-08 63.2 149 50.3
Gorai.010G032500 Gossypium raimondii HOM05D006739 ORTHO05D008402 7.9e-08 63.2 149 50.3
Gohir.A06G030375 Gossypium hirsutum HOM05D006739 ORTHO05D008402 1.0e-07 62.8 149 50.3
vmacro04630 Vaccinium macrocarpon HOM05D006739 ORTHO05D008402 1.3e-07 62.4 98 41.8
Thecc.08G075400 Theobroma cacao HOM05D006739 ORTHO05D008402 1.8e-07 62.0 154 50.0
Ca_15539_v3 Cicer arietinum L. HOM05D006739 ORTHO05D008402 3.9e-07 60.8 72 43.1
HPP92_004375 Vanilla planifolia HOM05D006739 ORTHO05D008402 3.9e-07 60.8 56 58.9
ATR0736G141 Amborella trichopoda HOM05D007620 ORTHO05D009568 8.7e-07 59.7 119 31.1
Dinv22007 Davidia involucrata HOM05D006739 ORTHO05D008402 1.1e-06 59.3 72 69.4
Hund26855 Selenicereus undatus HOM05D006739 ORTHO05D008402 1.1e-06 59.3 95 42.1
Actinidia19612 Actinidia chinensis HOM05D006739 ORTHO05D008402 1.5e-06 58.9 32 78.1
Rhsim07G0214200 Rhododendron simsii HOM05D006739 ORTHO05D008402 1.9e-06 58.5 82 42.7
Hund26833 Selenicereus undatus HOM05D006739 ORTHO05D008402 1.9e-06 58.5 144 50.0
CDE01G0171 Ceratophyllum demersum HOM05D007620 ORTHO05D009568 4.3e-06 57.4 90 32.2
COL.COLO4_35303 Corchorus olitorius HOM05D006739 ORTHO05D008402 4.3e-06 57.4 122 36.1
Hund26854 Selenicereus undatus HOM05D006739 ORTHO05D008402 4.3e-06 57.4 83 43.4
HPP92_004376 Vanilla planifolia HOM05D006739 ORTHO05D008402 7.4e-06 56.6 59 50.8


User provided reference genes

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