Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0796G340 Amborella trichopoda HOM05D006578 ORTHO05D008100 1.4e-133 479.6 236 100.0
TAR633G0540 Trochodendron aralioides HOM05D006578 ORTHO05D008100 1.4e-69 266.9 236 61.0
Dinv37530 Davidia involucrata HOM05D006578 ORTHO05D008100 5.1e-67 258.5 230 57.8
PGR042G0620 Punica granatum HOM05D006578 ORTHO05D008100 1.1e-66 257.3 232 58.2
EL10Ac5g12919 Beta vulgaris HOM05D006578 ORTHO05D008100 2.0e-66 256.5 238 55.5
CiPaw.11G120900 Carya illinoinensis HOM05D006578 ORTHO05D008100 7.4e-66 254.6 241 55.6
TWI60G1670 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 9.7e-66 254.2 240 56.7
Ah.07g197460 Amaranthus hybridus HOM05D006578 ORTHO05D008100 1.3e-65 253.8 243 55.1
MSTRG.11922 Avicennia marina HOM05D006578 ORTHO05D008100 8.2e-65 251.1 239 57.3
Ciclev10024562m.g Citrus clementina HOM05D006578 ORTHO05D008100 1.1e-64 250.8 236 55.9
Nitab4.5_0001210g0110 Nicotiana tabacum HOM05D006578 ORTHO05D008100 2.4e-64 249.6 233 55.8
AT4G23890 Arabidopsis thaliana HOM05D006578 ORTHO05D008100 4.1e-64 248.8 243 53.5
Hma1.2p1_0359F.1_g135230 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 4.1e-64 248.8 239 54.4
Sopen08g030660 Solanum pennellii HOM05D006578 ORTHO05D008100 4.1e-64 248.8 246 54.5
Cfa012002 Carpinus fangiana HOM05D006578 ORTHO05D008100 7.0e-64 248.1 244 54.9
CAN.G1804.8 Capsicum annuum HOM05D006578 ORTHO05D008100 9.1e-64 247.7 249 53.4
Lj3g0025915 Lotus japonicus HOM05D006578 ORTHO05D008100 1.2e-63 247.3 236 56.4
Oeu009960.1 Olea europaea HOM05D006578 ORTHO05D008100 1.5e-63 246.9 244 54.9
Cpa.g.sc79.32 Carica papaya HOM05D006578 ORTHO05D008100 2.0e-63 246.5 241 55.6
Thecc.03G298500 Theobroma cacao HOM05D006578 ORTHO05D008100 2.0e-63 246.5 243 55.6
CSS0036002 Camellia sinensis var. sinensis HOM05D006578 ORTHO05D008100 2.6e-63 246.1 243 55.6
PGSC0003DMG400044958 Solanum tuberosum HOM05D006578 ORTHO05D008100 3.5e-63 245.7 235 54.0
Prupe.5G120500 Prunus persica HOM05D006578 ORTHO05D008100 7.7e-63 244.6 243 54.3
THA.LOC104815081 Tarenaya hassleriana HOM05D006578 ORTHO05D008100 7.7e-63 244.6 247 53.8
Aa31LG6G7150 Aethionema arabicum HOM05D006578 ORTHO05D008100 1.3e-62 243.8 241 52.3
FAN18G3822 Fragaria x ananassa HOM05D006578 ORTHO05D008100 1.3e-62 243.8 249 53.0
Gohir.A05G346600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 1.7e-62 243.4 239 53.1
AL7G29450 Arabidopsis lyrata HOM05D006578 ORTHO05D008100 2.2e-62 243.0 248 52.8
BcaNung01096 Brassica carinata HOM05D006578 ORTHO05D008100 3.8e-62 242.3 240 54.2
BraA01t01458Z Brassica rapa HOM05D006578 ORTHO05D008100 3.8e-62 242.3 239 54.8
Atru.chr9.1977 Acer truncatum HOM05D006578 ORTHO05D008100 6.5e-62 241.5 243 53.1
Atru.chr9.1992 Acer truncatum HOM05D006578 ORTHO05D008100 6.5e-62 241.5 243 53.1
COL.COLO4_10707 Corchorus olitorius HOM05D006578 ORTHO05D008100 8.5e-62 241.1 238 53.8
FvH4_5g04650 Fragaria vesca HOM05D006578 ORTHO05D008100 8.5e-62 241.1 242 52.5
CARHR231290 Cardamine hirsuta HOM05D006578 ORTHO05D008100 1.1e-61 240.7 235 55.3
FAN18G0518 Fragaria x ananassa HOM05D006578 ORTHO05D008100 1.1e-61 240.7 249 52.6
BcaNung04080 Brassica carinata HOM05D006578 ORTHO05D008100 1.9e-61 240.0 241 53.1
Nitab4.5_0006775g0020 Nicotiana tabacum HOM05D006578 ORTHO05D008100 3.2e-61 239.2 240 55.0
Glyma.07G075100 Glycine max HOM05D006578 ORTHO05D008100 5.5e-61 238.4 243 53.1
Duzib068G0825 Durio zibethinus HOM05D006578 ORTHO05D008100 7.2e-61 238.0 240 53.8
MELO3C016296.2 Cucumis melo HOM05D006578 ORTHO05D008100 1.2e-60 237.3 240 54.6
Medtr8g032260 Medicago truncatula HOM05D006578 ORTHO05D008100 1.2e-60 237.3 239 54.4
AUR62010844 Chenopodium quinoa HOM05D006578 ORTHO05D008100 1.6e-60 236.9 239 53.1
SEGI_13573 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 2.1e-60 236.5 237 54.9
CsaV3_4G006610 Cucumis sativus L. HOM05D006578 ORTHO05D008100 2.7e-60 236.1 242 53.7
SEGI_09764 Sequoiadendron giganteum HOM05D006578 ORTHO05D008100 2.7e-60 236.1 200 60.0
Lsat_1_v5_gn_3_10861 Lactuca sativa HOM05D006578 ORTHO05D008100 3.6e-60 235.7 243 52.3
Solyc08g082400.1 Solanum lycopersicum HOM05D006578 ORTHO05D008100 3.6e-60 235.7 238 51.7
VMungo0331G0206 Vigna mungo HOM05D005332 ORTHO05D006861 3.6e-60 235.7 232 53.4
ClCG07G011600 Citrullus lanatus HOM05D006578 ORTHO05D008100 4.7e-60 235.3 237 54.4
Cc08_g16100 Coffea canephora HOM05D006578 ORTHO05D008100 4.7e-60 235.3 236 52.5
Phvul.010G094000 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 6.1e-60 235.0 238 53.4
Thhalv10027518m.g Eutrema salsugineum HOM05D006578 ORTHO05D008100 1.4e-59 233.8 246 51.6
Potri.001G091300 Populus trichocarpa HOM05D006578 ORTHO05D008100 1.4e-59 233.8 231 52.8
BraA03t14550Z Brassica rapa HOM05D006578 ORTHO05D008100 1.8e-59 233.4 239 51.5
A01p15200 Brassica napus HOM05D006578 ORTHO05D008100 2.3e-59 233.0 241 52.7
Potri.003G140400 Populus trichocarpa HOM05D006578 ORTHO05D008100 2.3e-59 233.0 235 51.9
Sabra01G0067600 Salix brachista HOM05D006578 ORTHO05D008100 3.0e-59 232.6 236 52.5
FAN13G1942 Fragaria x ananassa HOM05D006578 ORTHO05D008100 5.2e-59 231.9 251 51.4
Peaxi162Scf00074g00082 Petunia axillaris HOM05D006578 ORTHO05D008100 5.2e-59 231.9 225 52.0
C01p19130 Brassica napus HOM05D006578 ORTHO05D008100 6.7e-59 231.5 240 52.9
FAN04G1820 Fragaria x ananassa HOM05D006578 ORTHO05D008100 6.7e-59 231.5 249 51.8
QL02p030348 Quercus lobata HOM05D006578 ORTHO05D008100 6.7e-59 231.5 185 63.8
BolC1t01839H Brassica oleracea HOM05D006578 ORTHO05D008100 1.1e-58 230.7 240 52.9
Carub.0007s1722 Capsella rubella HOM05D006578 ORTHO05D008100 1.1e-58 230.7 241 51.5
HanXRQChr17g0534801 Helianthus annuus HOM05D006578 ORTHO05D008100 1.5e-58 230.3 238 55.0
PSO761G0627 Papaver somniferum HOM05D006578 ORTHO05D008100 1.5e-58 230.3 263 50.6
A03p54830 Brassica napus HOM05D006578 ORTHO05D008100 3.3e-58 229.2 239 51.0
Ca_18845_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 7.5e-58 228.0 241 52.7
BcaC09g50934 Brassica carinata HOM05D006578 ORTHO05D008100 1.7e-57 226.9 192 59.9
Haze_09067 Corylus avellana HOM05D006578 ORTHO05D008100 1.7e-57 226.9 183 61.7
Manes.02G009600 Manihot esculenta HOM05D006578 ORTHO05D008100 1.7e-57 226.9 239 50.6
FAN08G0426 Fragaria x ananassa HOM05D006578 ORTHO05D008100 2.2e-57 226.5 251 50.2
Sp7g21850 Schrenkiella parvula HOM05D006578 ORTHO05D008100 2.2e-57 226.5 241 51.0
unitig_32.g10973 Utricularia gibba HOM05D006578 ORTHO05D008100 1.1e-56 224.2 224 53.6
ECA246G0449 Erigeron canadensis HOM05D001832 ORTHO05D001861 1.4e-56 223.8 230 54.3
Lj2P167T19 Lonicera japonica HOM05D006578 ORTHO05D008100 1.8e-56 223.4 187 62.0
Actinidia27316 Actinidia chinensis HOM05D006578 ORTHO05D008100 2.0e-55 219.9 184 59.2
PSO210G4984 Papaver somniferum HOM05D006578 ORTHO05D008100 2.6e-55 219.5 264 48.9
Lalb_Chr04g0256691 Lupinus albus HOM05D006578 ORTHO05D008100 5.9e-55 218.4 243 51.4
Migut.A00640 Erythranthe guttata HOM05D006578 ORTHO05D008100 7.7e-55 218.0 242 52.5
DCAR_029888 Daucus carota HOM05D006578 ORTHO05D008100 2.2e-54 216.5 221 53.8
Gohir.D04G065600 Gossypium hirsutum HOM05D006578 ORTHO05D008100 6.5e-54 214.9 238 49.2
Gorai.012G073800 Gossypium raimondii HOM05D006578 ORTHO05D008100 1.1e-53 214.2 238 49.2
Sed0010985 Sechium edule HOM05D006578 ORTHO05D008100 4.2e-53 212.2 233 49.8
AUR62019843 Chenopodium quinoa HOM05D006578 ORTHO05D008100 8.8e-51 204.5 239 47.7
Aqoxy2G01516 Aquilegia oxysepala HOM05D006578 ORTHO05D008100 2.0e-50 203.4 249 48.2
Hma1.2p1_0359F.1_g135240 Hydrangea macrophylla HOM05D006578 ORTHO05D008100 6.3e-49 198.4 133 70.7
Zm00001eb224490 Zea mays HOM05D006578 ORTHO05D008100 6.5e-46 188.3 232 44.4
Os07g0196200 Oryza sativa ssp. japonica HOM05D006578 ORTHO05D008100 8.5e-46 188.0 205 47.3
FAN13G3291 Fragaria x ananassa HOM05D006578 ORTHO05D008100 4.7e-44 182.2 237 45.6
Mapoly0067s0043 Marchantia polymorpha HOM05D006578 ORTHO05D008100 5.2e-43 178.7 191 50.3
Psat4g152960 Pisum sativum HOM05D006578 ORTHO05D008100 8.8e-43 177.9 234 45.3
Sabra03G0101400 Salix brachista HOM05D006578 ORTHO05D008100 2.0e-42 176.8 235 43.4
GSVIVG01019536001 Vitis vinifera HOM05D006578 ORTHO05D008100 3.7e-41 172.6 239 44.4
AagrBONN_evm.TU.Sc2ySwM_117.36 Anthoceros agrestis HOM05D006578 ORTHO05D008100 2.4e-40 169.9 193 46.1
Pp3c11_19730 Physcomitrium patens HOM05D006578 ORTHO05D008100 3.1e-40 169.5 192 45.3
SMO146G0113 Selaginella moellendorffii HOM05D006578 ORTHO05D008100 4.5e-39 165.6 212 45.8
CBR_g28643 Chara braunii HOM05D006578 ORTHO05D008100 2.5e-37 159.8 190 45.8
C07p53190 Brassica napus HOM05D006578 ORTHO05D008100 7.3e-29 131.7 168 44.0
BcaNung04242 Brassica carinata HOM05D006578 ORTHO05D008100 2.1e-28 130.2 168 43.5
BolC7t45814H Brassica oleracea HOM05D006578 ORTHO05D008100 2.1e-28 130.2 168 43.5
SalBow1G4365 Salvia bowleyana HOM05D006578 ORTHO05D008100 1.1e-24 117.9 234 35.0
SalBow1G5827 Salvia bowleyana HOM05D006578 ORTHO05D008100 1.1e-24 117.9 234 35.0
TWI81G0713 Tripterygium wilfordii HOM05D006578 ORTHO05D008100 4.3e-21 105.9 148 43.9
SGA_v2.0_scaffold96G29015 Striga asiatica HOM05D003962 ORTHO05D004714 1.6e-20 104.0 145 43.4
CiPaw.12G082500 Carya illinoinensis HOM05D006578 ORTHO05D008100 8.1e-20 101.7 124 44.4
arahy.Tifrunner.gnm1.ann1.6WXN94 Arachis hypogaea HOM05D006578 ORTHO05D008100 1.8e-19 100.5 141 41.8
Lj1g0003243 Lotus japonicus HOM05D006578 ORTHO05D008100 8.9e-19 98.2 148 41.2
arahy.Tifrunner.gnm1.ann1.UYM9MT Arachis hypogaea HOM05D006578 ORTHO05D008100 2.0e-18 97.1 147 40.1
Medtr7g076620 Medicago truncatula HOM05D006578 ORTHO05D008100 2.6e-18 96.7 137 38.0
Ca_07882_v3 Cicer arietinum L. HOM05D006578 ORTHO05D008100 7.5e-18 95.1 124 45.2
Glyma.09G263100 Glycine max HOM05D006578 ORTHO05D008100 1.3e-17 94.4 162 37.7
Psat3g111760 Pisum sativum HOM05D006578 ORTHO05D008100 2.2e-17 93.6 141 40.4
Sc07g0010050 Simmondsia chinensis HOM05D006578 ORTHO05D008100 2.9e-17 93.2 149 40.3
Phvul.008G068900 Phaseolus vulgaris HOM05D006578 ORTHO05D008100 1.4e-16 90.9 146 37.0
VMungo1383G2377 Vigna mungo HOM05D006578 ORTHO05D008100 4.1e-16 89.4 143 38.5
HPP92_001215 Vanilla planifolia HOM05D006578 ORTHO05D008100 7.1e-16 88.6 110 44.5
TPR.G17579 Trifolium pratense HOM05D006578 ORTHO05D008100 9.2e-16 88.2 129 38.0
Glyma.18G229100 Glycine max HOM05D006578 ORTHO05D008100 1.6e-15 87.4 154 35.7
Nn4g25270 Nelumbo nucifera HOM05D006578 ORTHO05D008100 5.1e-14 82.4 118 43.2
Sabra15G0075700 Salix brachista HOM05D000345 ORTHO05D000215 1.1e-13 81.3 100 46.0
Glyma.03G015000 Glycine max HOM05D006578 ORTHO05D008100 2.3e-11 73.6 129 38.8
Oeu054024.1 Olea europaea HOM05D006578 ORTHO05D008100 4.4e-10 69.3 64 54.7


User provided reference genes

Program Settings