Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
ATR0796G313 Amborella trichopoda HOM05D005241 ORTHO05D005862 3.8e-201 704.5 334 100.0
CDE10G0441 Ceratophyllum demersum HOM05D005241 ORTHO05D005862 3.8e-156 555.1 314 79.3
MBI18_g28946_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 8.4e-156 553.9 313 80.2
SalBow6G2881 Salvia bowleyana HOM05D005241 ORTHO05D005862 2.1e-154 549.3 314 79.6
TAR629G1464 Trochodendron aralioides HOM05D005241 ORTHO05D005862 1.7e-153 546.2 310 79.0
Actinidia24021 Actinidia chinensis HOM05D005241 ORTHO05D005862 1.5e-152 543.1 321 77.3
Atru.chr7.554 Acer truncatum HOM05D005241 ORTHO05D005862 1.3e-151 540.0 310 80.3
Lj9A730T54 Lonicera japonica HOM05D005241 ORTHO05D005862 1.6e-151 539.7 304 80.3
Oeu043521.1 Olea europaea HOM05D005241 ORTHO05D005862 2.8e-151 538.9 310 78.1
SalBow6G2671 Salvia bowleyana HOM05D005241 ORTHO05D005862 4.8e-151 538.1 310 79.7
Dinv41292 Davidia involucrata HOM05D005241 ORTHO05D005862 6.2e-151 537.7 310 77.7
Potri.018G097100 Populus trichocarpa HOM05D005241 ORTHO05D005862 6.2e-151 537.7 311 77.5
Sopen12g007320 Solanum pennellii HOM05D005241 ORTHO05D005862 3.1e-150 535.4 310 77.4
Ciclev10008429m.g Citrus clementina HOM05D005241 ORTHO05D005862 5.3e-150 534.6 311 78.5
Manes.06G028800 Manihot esculenta HOM05D005241 ORTHO05D005862 5.3e-150 534.6 310 78.1
Nn7g37052 Nelumbo nucifera HOM05D005241 ORTHO05D005862 5.3e-150 534.6 309 78.0
Solyc12g014440.2 Solanum lycopersicum HOM05D005241 ORTHO05D005862 9.0e-150 533.9 322 75.5
Haze_22151 Corylus avellana HOM05D005241 ORTHO05D005862 1.5e-149 533.1 304 79.6
Aqoxy4G03021 Aquilegia oxysepala HOM05D005241 ORTHO05D005862 2.2e-148 529.3 310 77.1
PGR102G1178 Punica granatum HOM05D005241 ORTHO05D005862 2.2e-148 529.3 308 75.6
CSS0029475 Camellia sinensis var. sinensis HOM05D005241 ORTHO05D005862 3.8e-148 528.5 310 76.5
HanXRQChr06g0178861 Helianthus annuus HOM05D005241 ORTHO05D005862 4.9e-148 528.1 311 77.5
MSTRG.19688 Avicennia marina HOM05D005241 ORTHO05D005862 6.4e-148 527.7 309 77.0
Os07g0516000 Oryza sativa ssp. japonica HOM05D005241 ORTHO05D005862 1.1e-147 526.9 312 75.3
CiPaw.07G187700 Carya illinoinensis HOM05D005241 ORTHO05D005862 1.9e-147 526.2 310 77.1
SGA_v2.0_scaffold66G22503 Striga asiatica HOM05D005241 ORTHO05D005862 1.9e-147 526.2 311 76.2
Sabra18G0084300 Salix brachista HOM05D005241 ORTHO05D005862 4.2e-147 525.0 307 77.2
QL02p096102 Quercus lobata HOM05D005241 ORTHO05D005862 5.5e-147 524.6 304 78.0
MD13G1261500 Malus domestica HOM05D005241 ORTHO05D005862 7.1e-147 524.2 308 75.6
PSO135G0092 Papaver somniferum HOM05D005241 ORTHO05D005862 7.1e-147 524.2 311 76.8
COL.COLO4_16080 Corchorus olitorius HOM05D005241 ORTHO05D005862 9.3e-147 523.9 313 76.4
Dinv42767 Davidia involucrata HOM05D005241 ORTHO05D005862 9.3e-147 523.9 310 77.7
Dinv43336 Davidia involucrata HOM05D005241 ORTHO05D005862 9.3e-147 523.9 310 77.7
ECA236G3445 Erigeron canadensis HOM05D005241 ORTHO05D005862 1.2e-146 523.5 312 76.3
Lsat_1_v5_gn_8_65460 Lactuca sativa HOM05D005241 ORTHO05D005862 1.6e-146 523.1 313 76.0
TWI34G0564 Tripterygium wilfordii HOM05D005241 ORTHO05D005862 2.1e-146 522.7 307 78.8
TWI34G1734 Tripterygium wilfordii HOM05D005241 ORTHO05D005862 2.1e-146 522.7 307 78.8
Duzib150G1634 Durio zibethinus HOM05D005241 ORTHO05D005862 2.7e-146 522.3 310 76.1
PSO384G1775 Papaver somniferum HOM05D005241 ORTHO05D005862 3.5e-146 521.9 311 76.2
THA.LOC104813533 Tarenaya hassleriana HOM05D005241 ORTHO05D005862 4.6e-146 521.5 310 76.1
CANSAT11G2449 Cannabis sativa HOM05D005241 ORTHO05D005862 6.0e-146 521.2 324 72.5
PSO135G0726 Papaver somniferum HOM05D005241 ORTHO05D005862 7.9e-146 520.8 311 76.2
vmacro13085 Vaccinium macrocarpon HOM05D005241 ORTHO05D005862 7.9e-146 520.8 310 74.2
RcHm_v2.0_Chr4g0404611 Rosa chinensis HOM05D005241 ORTHO05D005862 1.0e-145 520.4 308 76.6
Gohir.D06G047501 Gossypium hirsutum HOM05D005241 ORTHO05D005862 1.3e-145 520.0 310 75.5
Phvul.003G150000 Phaseolus vulgaris HOM05D005241 ORTHO05D005862 1.3e-145 520.0 310 76.1
Lalb_Chr07g0180171 Lupinus albus HOM05D005241 ORTHO05D005862 2.3e-145 519.2 310 74.2
Medtr4g129200 Medicago truncatula HOM05D005241 ORTHO05D005862 3.9e-145 518.5 331 72.2
Thecc.09G163700 Theobroma cacao HOM05D005241 ORTHO05D005862 3.9e-145 518.5 310 75.8
FAN07G2217 Fragaria x ananassa HOM05D005241 ORTHO05D005862 8.7e-145 517.3 308 76.0
FvH4_4g09810 Fragaria vesca HOM05D005241 ORTHO05D005862 1.1e-144 516.9 308 76.6
FAN12G0682 Fragaria x ananassa HOM05D005241 ORTHO05D005862 1.1e-144 516.9 308 76.6
Hund09015 Selenicereus undatus HOM05D005241 ORTHO05D005862 1.1e-144 516.9 314 73.6
unitig_0.g567 Utricularia gibba HOM05D005241 ORTHO05D005862 1.1e-144 516.9 310 75.5
Glyma.17G067600 Glycine max HOM05D005241 ORTHO05D005862 1.5e-144 516.5 310 75.5
Gohir.A06G047300 Gossypium hirsutum HOM05D005241 ORTHO05D005862 1.5e-144 516.5 310 75.2
FAN17G0752 Fragaria x ananassa HOM05D005241 ORTHO05D005862 1.9e-144 516.2 308 75.6
TPR.G5349 Trifolium pratense HOM05D005241 ORTHO05D005862 2.5e-144 515.8 306 75.8
Gorai.010G053100 Gossypium raimondii HOM05D005241 ORTHO05D005862 3.3e-144 515.4 311 75.2
Ca_21190_v3 Cicer arietinum L. HOM05D005241 ORTHO05D005862 5.6e-144 514.6 308 75.3
DCAR_014714 Daucus carota HOM05D005241 ORTHO05D005862 1.3e-143 513.5 309 75.1
Glyma.13G092800 Glycine max HOM05D005241 ORTHO05D005862 2.8e-143 512.3 308 76.3
VMungo1215G3242 Vigna mungo HOM05D005241 ORTHO05D005862 2.8e-143 512.3 304 76.0
Psat4g010840 Pisum sativum HOM05D005241 ORTHO05D005862 3.7e-143 511.9 310 74.2
PSO384G2580 Papaver somniferum HOM05D005241 ORTHO05D005862 6.2e-143 511.1 311 74.9
Psat4g010800 Pisum sativum HOM05D005241 ORTHO05D005862 6.2e-143 511.1 317 74.1
Medtr4g129180 Medicago truncatula HOM05D005241 ORTHO05D005862 1.8e-142 509.6 310 73.9
Gohir.A05G345818 Gossypium hirsutum HOM05D005241 ORTHO05D005862 2.4e-142 509.2 316 73.7
arahy.Tifrunner.gnm1.ann1.RWXM46 Arachis hypogaea HOM05D005241 ORTHO05D005862 4.0e-142 508.4 310 74.8
Eucgr.C02440 Eucalyptus grandis HOM05D005241 ORTHO05D005862 9.0e-142 507.3 308 74.0
Thecc.09G163500 Theobroma cacao HOM05D005241 ORTHO05D005862 9.0e-142 507.3 310 73.5
PSO135G0552 Papaver somniferum HOM05D005241 ORTHO05D005862 1.2e-141 506.9 311 74.6
Lalb_Chr07g0180161 Lupinus albus HOM05D005241 ORTHO05D005862 1.5e-141 506.5 308 74.4
COL.COLO4_16078 Corchorus olitorius HOM05D005241 ORTHO05D005862 2.6e-141 505.8 304 75.3
Lj4g0014860 Lotus japonicus HOM05D005241 ORTHO05D005862 3.4e-141 505.4 304 75.3
HPP92_013485 Vanilla planifolia HOM05D005241 ORTHO05D005862 1.0e-140 503.8 311 74.3
Thhalv10013983m.g Eutrema salsugineum HOM05D005241 ORTHO05D005862 1.7e-140 503.1 310 74.8
Rhsim01G0009500 Rhododendron simsii HOM05D005241 ORTHO05D005862 1.7e-140 503.1 304 75.3
CsaV3_1G029530 Cucumis sativus L. HOM05D005241 ORTHO05D005862 2.2e-140 502.7 309 72.8
AT5G57700 Arabidopsis thaliana HOM05D005241 ORTHO05D005862 3.8e-140 501.9 310 74.2
AL8G33730 Arabidopsis lyrata HOM05D005241 ORTHO05D005862 6.5e-140 501.1 310 74.5
Phvul.003G150200 Phaseolus vulgaris HOM05D005241 ORTHO05D005862 1.1e-139 500.4 307 73.9
Cc06_g13790 Coffea canephora HOM05D005241 ORTHO05D005862 1.4e-139 500.0 303 74.6
SEGI_10163 Sequoiadendron giganteum HOM05D005241 ORTHO05D005862 1.4e-139 500.0 315 72.4
Sp6g19390 Schrenkiella parvula HOM05D005241 ORTHO05D005862 2.5e-139 499.2 310 74.2
CARHR271450 Cardamine hirsuta HOM05D005241 ORTHO05D005862 4.2e-139 498.4 310 73.2
Gorai.012G095700 Gossypium raimondii HOM05D005241 ORTHO05D005862 4.2e-139 498.4 310 74.5
arahy.Tifrunner.gnm1.ann1.4YP8RP Arachis hypogaea HOM05D005241 ORTHO05D005862 7.1e-139 497.7 312 72.8
C03p14830 Brassica napus HOM05D005241 ORTHO05D005862 1.6e-138 496.5 310 73.2
BolC3t13925H Brassica oleracea HOM05D005241 ORTHO05D005862 1.6e-138 496.5 310 73.2
EL10Ac8g18255 Beta vulgaris HOM05D005241 ORTHO05D005862 6.0e-138 494.6 306 73.5
Gohir.D04G085700 Gossypium hirsutum HOM05D005241 ORTHO05D005862 7.9e-138 494.2 310 73.5
A03p12620 Brassica napus HOM05D005241 ORTHO05D005862 1.3e-137 493.4 310 72.6
BraA03t10577Z Brassica rapa HOM05D005241 ORTHO05D005862 5.1e-137 491.5 310 72.6
Aa31LG3G13540 Aethionema arabicum HOM05D005241 ORTHO05D005862 1.5e-136 490.0 320 70.6
Peaxi162Scf00078g00547 Petunia axillaris HOM05D005241 ORTHO05D005862 7.4e-136 487.6 309 72.8
Lj4g0023001 Lotus japonicus HOM05D005241 ORTHO05D005862 1.3e-135 486.9 319 70.5
AUR62040288 Chenopodium quinoa HOM05D005241 ORTHO05D005862 3.7e-135 485.3 304 72.0
Os07g0516050 Oryza sativa ssp. japonica HOM05D005241 ORTHO05D005862 6.3e-135 484.6 319 68.3
ClCG06G012960 Citrullus lanatus HOM05D005241 ORTHO05D005862 5.3e-134 481.5 309 71.5
Glyma.13G092900 Glycine max HOM05D005241 ORTHO05D005862 1.7e-132 476.5 310 71.9
Mapoly0080s0044 Marchantia polymorpha HOM05D005241 ORTHO05D005862 1.3e-127 460.3 313 65.5
SMO351G0057 Selaginella moellendorffii HOM05D005241 ORTHO05D005862 3.4e-125 452.2 305 67.5
Nitab4.5_0000168g0090 Nicotiana tabacum HOM05D005241 ORTHO05D005862 5.9e-125 451.4 311 68.2
Zm00001eb105960 Zea mays HOM05D005241 ORTHO05D005862 1.0e-124 450.7 288 69.8
HPP92_026039 Vanilla planifolia HOM05D005241 ORTHO05D005862 2.9e-124 449.1 311 68.2
Nitab4.5_0006743g0030 Nicotiana tabacum HOM05D005241 ORTHO05D005862 6.5e-124 448.0 312 68.3
Sc08g0005390 Simmondsia chinensis HOM05D005241 ORTHO05D005862 2.5e-123 446.0 312 67.0
Zm00001eb105910 Zea mays HOM05D005241 ORTHO05D005862 1.0e-121 440.7 303 64.4
Pp3c3_37310 Physcomitrium patens HOM05D005241 ORTHO05D005862 2.0e-120 436.4 315 63.2
EL10Ac8g18254 Beta vulgaris HOM05D005241 ORTHO05D005862 4.3e-120 435.3 311 61.7
Peaxi162Scf00339g00098 Petunia axillaris HOM05D005241 ORTHO05D005862 4.3e-120 435.3 312 68.3
AUR62039979 Chenopodium quinoa HOM05D005241 ORTHO05D005862 9.7e-120 434.1 305 62.0
PGSC0003DMG400012851 Solanum tuberosum HOM05D005241 ORTHO05D005862 6.9e-118 427.9 304 66.8
Hund26388 Selenicereus undatus HOM05D005241 ORTHO05D005862 2.4e-110 402.9 315 60.0
Hma1.2p1_0921F.1_g236680 Hydrangea macrophylla HOM05D005241 ORTHO05D005862 5.3e-110 401.7 329 59.0
Hma1.2p1_2604F.1_g325280 Hydrangea macrophylla HOM05D005241 ORTHO05D005862 5.3e-110 401.7 329 59.0
FAN22G1361 Fragaria x ananassa HOM05D005241 ORTHO05D005862 2.5e-107 392.9 437 48.5
Sed0027242 Sechium edule HOM05D005241 ORTHO05D005862 1.2e-106 390.6 231 74.9
Migut.J01437 Erythranthe guttata HOM05D005241 ORTHO05D005862 4.7e-98 362.1 210 77.6
SEGI_04095 Sequoiadendron giganteum HOM05D005241 ORTHO05D005862 5.4e-94 348.6 219 71.2
Carub.0008s1821 Capsella rubella HOM05D005241 ORTHO05D005862 7.7e-93 344.7 199 77.9
Cpa.g.sc450.6 Carica papaya HOM05D005241 ORTHO05D005862 1.1e-91 340.9 201 77.1
MELO3C029512.2 Cucumis melo HOM05D005241 ORTHO05D005862 4.1e-86 322.4 251 61.0
EL10Ac9g22414 Beta vulgaris HOM05D005241 ORTHO05D005862 1.5e-80 303.9 305 48.9
TPR.G5299 Trifolium pratense HOM05D005241 ORTHO05D005862 5.7e-80 302.0 184 71.7
TPR.G40451 Trifolium pratense HOM05D005241 ORTHO05D005862 4.9e-79 298.9 176 74.4
Prupe.1G095300 Prunus persica HOM05D005241 ORTHO05D005862 3.0e-76 289.7 163 79.1
Nitab4.5_0000692g0020 Nicotiana tabacum HOM05D005241 ORTHO05D005862 4.9e-71 272.3 304 49.0
EL10Ac7g17876 Beta vulgaris HOM05D005241 ORTHO05D005862 4.0e-49 199.5 208 46.6
MBI18_g46216_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 3.8e-39 166.4 99 77.8
MELO3C017513.2 Cucumis melo HOM05D005241 ORTHO05D005862 1.2e-37 161.4 97 71.1
Glyma.17G067650 Glycine max HOM05D005241 ORTHO05D005862 1.1e-35 154.8 87 74.7
Hund09002 Selenicereus undatus HOM05D000185 ORTHO05D000105 1.5e-35 154.5 98 72.4
MBI18_g29570_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 1.6e-29 134.4 91 64.8
Nn8g41235 Nelumbo nucifera HOM05D005241 ORTHO05D005862 7.9e-29 132.1 82 72.0
SHI03002 Sapria himalayana HOM05D005241 ORTHO05D005862 3.7e-26 123.2 325 29.5
Sc08g0005370 Simmondsia chinensis HOM05D005241 ORTHO05D005862 1.4e-25 121.3 81 69.1
FAN12G2859 Fragaria x ananassa HOM05D005241 ORTHO05D005862 4.0e-25 119.8 73 76.7
AagrBONN_evm.TU.Sc2ySwM_228.5641 Anthoceros agrestis HOM05D005241 ORTHO05D005862 1.4e-22 111.3 314 26.8
Peaxi162Scf00014g00192 Petunia axillaris HOM05D005241 ORTHO05D005862 8.7e-20 102.1 92 59.8
CBR_g30152 Chara braunii HOM05D010403 ORTHO05D005862 2.3e-12 77.4 146 34.2
CBR_g30241 Chara braunii HOM05D005241 ORTHO05D005862 1.1e-11 75.1 303 25.1
MBI19_g36862_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 2.5e-11 73.9 49 61.2
Peaxi162Scf00013g00004 Petunia axillaris HOM05D000090 ORTHO05D001322 1.8e-09 67.8 41 65.9
MBI18_g11928_MAGBIO Magnolia biondii HOM05D005241 ORTHO05D005862 2.4e-09 67.4 49 63.3
Peaxi162Scf00609g00310 Petunia axillaris HOM05D004037 ORTHO05D019316 2.9e-07 60.5 43 69.8


User provided reference genes

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